| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221632649
Identifier: 221632649
GI number: 221632649
Start: 621556
End: 621678
Strand: Reverse
Name: 221632649
Synonym: trd_0631
Alternate gene names: NA
Gene position: 621678-621556 (Counterclockwise)
Preceding gene: 221632650
Following gene: 221632646
Centisome position: 31.04
GC content: 65.04
Gene sequence:
>123_bases GTGGCACTCGATGCACGGGTCGTTCCCGCTGCTGCGTATCGAGAAGGCGGCCAGCGCGAGACTCAGTCGTCCGATCGGGC AGAAACGCTTTTCCCGCTCCAGTGCGCGGTTGTCACGCCGTGA
Upstream 100 bases:
>100_bases ACCAGAAGGGATCATCGGATGCCGACCGACCGCTCGAAACCGACCACCTTGCTGCAAGACAGGCACGAATGGAGGAAAAC GTGGGTCACAGCTCGAACGG
Downstream 100 bases:
>100_bases CGGGAACAGCTGGGTCGGCCAGCCGATAGCCGAGTCCCGGCCGGGTCTGGATGATGCGATGCGGCTCCTCGTCGTCGCGC AGTTTAGCCCGCAACCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MALDARVVPAAAYREGGQRETQSSDRAETLFPLQCAVVTP
Sequences:
>Translated_40_residues MALDARVVPAAAYREGGQRETQSSDRAETLFPLQCAVVTP >Mature_39_residues ALDARVVPAAAYREGGQRETQSSDRAETLFPLQCAVVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4306; Mature: 4175
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDARVVPAAAYREGGQRETQSSDRAETLFPLQCAVVTP CCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCEEEEEECC >Mature Secondary Structure ALDARVVPAAAYREGGQRETQSSDRAETLFPLQCAVVTP CCCCCCCCCHHHCCCCCCCCCCCCCCCEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA