Click here to switch to the map view.

The map label for this gene is yggU [C]

Identifier: 221632637

GI number: 221632637

Start: 610649

End: 610957

Strand: Reverse

Name: yggU [C]

Synonym: trd_0618

Alternate gene names: 221632637

Gene position: 610957-610649 (Counterclockwise)

Preceding gene: 221632638

Following gene: 221632631

Centisome position: 30.5

GC content: 66.34

Gene sequence:

>309_bases
ATGACCTTCGCCCCGATCGACCGAGCCGGACCAGCCGTCGAGTTTTGGGTTCAGGTCCAGCCGCGCGCTCCGCGAGCGGA
AGTTGCTGGTTCGCGACGCGATGCCCTGCTCGTCCGAGTGACAGCACCGCCGCGTGACGGTGAGGCGAACGAAGCGGTCC
TCCGCCTTCTCGCCGAGACGCTCCATCTCCCCCGCGGGAGTATCCGCATCATCGCCGGGACAGCGCAGCGACGCAAGCGC
ATTCGCATCGACGGCCTGACCAGCAAGGAATTACTGGAGCGACTCGCTCCCATCCTTCACCGCTCCTGA

Upstream 100 bases:

>100_bases
CTGGGTACGAGTTCATTACACTCGATCTCGAGGGCTATCGTTCCGGCAGCTTCAACCGTACCCTTCCGGACGCCCTGAAA
GTCGGGAGCACCGGCCACTC

Downstream 100 bases:

>100_bases
GTCGGCCGCCCACCGGCGAATCGTCGCCAGAGCCAGTACAACGCGGTTGCCCCGAGTCCCACCATTACCCCTGCCCGGAC
GAGCTGGCTGGAACGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MTFAPIDRAGPAVEFWVQVQPRAPRAEVAGSRRDALLVRVTAPPRDGEANEAVLRLLAETLHLPRGSIRIIAGTAQRRKR
IRIDGLTSKELLERLAPILHRS

Sequences:

>Translated_102_residues
MTFAPIDRAGPAVEFWVQVQPRAPRAEVAGSRRDALLVRVTAPPRDGEANEAVLRLLAETLHLPRGSIRIIAGTAQRRKR
IRIDGLTSKELLERLAPILHRS
>Mature_101_residues
TFAPIDRAGPAVEFWVQVQPRAPRAEVAGSRRDALLVRVTAPPRDGEANEAVLRLLAETLHLPRGSIRIIAGTAQRRKRI
RIDGLTSKELLERLAPILHRS

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11334; Mature: 11203

Theoretical pI: Translated: 12.04; Mature: 12.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFAPIDRAGPAVEFWVQVQPRAPRAEVAGSRRDALLVRVTAPPRDGEANEAVLRLLAET
CCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
LHLPRGSIRIIAGTAQRRKRIRIDGLTSKELLERLAPILHRS
HCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFAPIDRAGPAVEFWVQVQPRAPRAEVAGSRRDALLVRVTAPPRDGEANEAVLRLLAET
CCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
LHLPRGSIRIIAGTAQRRKRIRIDGLTSKELLERLAPILHRS
HCCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA