| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is arcC [H]
Identifier: 221632596
GI number: 221632596
Start: 569414
End: 570361
Strand: Reverse
Name: arcC [H]
Synonym: trd_0571
Alternate gene names: 221632596
Gene position: 570361-569414 (Counterclockwise)
Preceding gene: 221632597
Following gene: 221632595
Centisome position: 28.48
GC content: 63.61
Gene sequence:
>948_bases ATGAGGCGCATCGTCGTTGCGCTCGGCGGCAACGCCATCATTCAGGCAGGCCAACGCGGCACAGCCGAAGAACAGCAAGC CAATGTCGATCTCACCTGTCGCCAGTTGGCCGAACTCGTCGCTGCCGGGTACGAACTCATCATTACGCACGGTAATGGTC CGCAAGTCGGAAACCTCCTCGTCAAGAACGAGCTGGCTCGCGAGATCGTCCCACCCGTCCCGCTCCACTGGTGCGTTGCA CAGACACAAGCGACGATCGGGTTCATGATCCAACAATCCTTGGGAGCAGAACTGCGGCAACGCGGCATCGACCGGGTCGT CGCCACGCTGGTGACGCGCACCGAGGTCAGTCCGGACGACCCGGCTTGGAATGACCCCACGAAGCCGATCGGCCTCTATT ACCCGGAAGAGCGGGCTCGGGCCATCATGGCTGAAACCGGCCAGGTGTGGAAGCCACAGGGCACGCGCGGCTGGCGGCGA GTCGTTCCCTCACCCGATCCGATTGCCATCGTCGATCGACCAGCGATCGAACTGTTGCTCGCGGCTGGCGCACTGGTCGT CGCCTGTGGCGGTGGCGGTATCCCGGTCGTTCGGCGCCCGGACGGACGGTACGAAGGTGTCGAGGCGGTGGTCGACAAAG ATCTGGCTGCCGCGCTGCTCGCCCACGAACTCGGGGCAGATGCCCTGCTGATCCTGACCGATGTTCCCAACGTCATGCTT CATTACGGGACACCCCAGGCCCGTCCACTCGAACGGGTTCTCGCGAGTGAACTGCGGCGCTACCAAGTAGAAGGACATTT TGCGAGCGGGAGCATGGGTCCGAAAGTAGAAGCCGCTCTCCGATTCGTGAGTAGGGGATCGACCCGACGCTCGATCATCG CGGCGTTGGATCATGCTCGCGATGCGCTCGAAGGACGCGCCGGCACGCACGTGCTGCCCGATCCGTGA
Upstream 100 bases:
>100_bases GACCACCCGCGCGATGCTTCACCGAAGCCTACCGGGCCTTCGAGGATGCGTATCTCGCAGGACACAGTCGAACCACTACC TTGGAGTCGAGGGGGATGGC
Downstream 100 bases:
>100_bases CCGCCGGGCCGATCCGCCCGTCATGTCGAGGGGGACTGATCGGCTAGCCAAGATGAGCAACAGTGCTCCTCCCTTTCGTC TCTACTGAGACCGCGTCAGC
Product: carbamate kinase
Products: NA
Alternate protein names: Carbamate kinase-like carbamoylphosphate synthase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRRIVVALGGNAIIQAGQRGTAEEQQANVDLTCRQLAELVAAGYELIITHGNGPQVGNLLVKNELAREIVPPVPLHWCVA QTQATIGFMIQQSLGAELRQRGIDRVVATLVTRTEVSPDDPAWNDPTKPIGLYYPEERARAIMAETGQVWKPQGTRGWRR VVPSPDPIAIVDRPAIELLLAAGALVVACGGGGIPVVRRPDGRYEGVEAVVDKDLAAALLAHELGADALLILTDVPNVML HYGTPQARPLERVLASELRRYQVEGHFASGSMGPKVEAALRFVSRGSTRRSIIAALDHARDALEGRAGTHVLPDP
Sequences:
>Translated_315_residues MRRIVVALGGNAIIQAGQRGTAEEQQANVDLTCRQLAELVAAGYELIITHGNGPQVGNLLVKNELAREIVPPVPLHWCVA QTQATIGFMIQQSLGAELRQRGIDRVVATLVTRTEVSPDDPAWNDPTKPIGLYYPEERARAIMAETGQVWKPQGTRGWRR VVPSPDPIAIVDRPAIELLLAAGALVVACGGGGIPVVRRPDGRYEGVEAVVDKDLAAALLAHELGADALLILTDVPNVML HYGTPQARPLERVLASELRRYQVEGHFASGSMGPKVEAALRFVSRGSTRRSIIAALDHARDALEGRAGTHVLPDP >Mature_315_residues MRRIVVALGGNAIIQAGQRGTAEEQQANVDLTCRQLAELVAAGYELIITHGNGPQVGNLLVKNELAREIVPPVPLHWCVA QTQATIGFMIQQSLGAELRQRGIDRVVATLVTRTEVSPDDPAWNDPTKPIGLYYPEERARAIMAETGQVWKPQGTRGWRR VVPSPDPIAIVDRPAIELLLAAGALVVACGGGGIPVVRRPDGRYEGVEAVVDKDLAAALLAHELGADALLILTDVPNVML HYGTPQARPLERVLASELRRYQVEGHFASGSMGPKVEAALRFVSRGSTRRSIIAALDHARDALEGRAGTHVLPDP
Specific function: Unknown
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789238, Length=313, Percent_Identity=42.4920127795527, Blast_Score=232, Evalue=3e-62, Organism=Escherichia coli, GI1786516, Length=312, Percent_Identity=43.9102564102564, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI1786732, Length=312, Percent_Identity=46.7948717948718, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 - InterPro: IPR023000 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 33875; Mature: 33875
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIVVALGGNAIIQAGQRGTAEEQQANVDLTCRQLAELVAAGYELIITHGNGPQVGNLL CCEEEEEECCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHH VKNELAREIVPPVPLHWCVAQTQATIGFMIQQSLGAELRQRGIDRVVATLVTRTEVSPDD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAWNDPTKPIGLYYPEERARAIMAETGQVWKPQGTRGWRRVVPSPDPIAIVDRPAIELLL CCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHH AAGALVVACGGGGIPVVRRPDGRYEGVEAVVDKDLAAALLAHELGADALLILTDVPNVML HCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE HYGTPQARPLERVLASELRRYQVEGHFASGSMGPKVEAALRFVSRGSTRRSIIAALDHAR ECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DALEGRAGTHVLPDP HHHCCCCCCCCCCCC >Mature Secondary Structure MRRIVVALGGNAIIQAGQRGTAEEQQANVDLTCRQLAELVAAGYELIITHGNGPQVGNLL CCEEEEEECCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHHH VKNELAREIVPPVPLHWCVAQTQATIGFMIQQSLGAELRQRGIDRVVATLVTRTEVSPDD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAWNDPTKPIGLYYPEERARAIMAETGQVWKPQGTRGWRRVVPSPDPIAIVDRPAIELLL CCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCEEEECCHHHHHHH AAGALVVACGGGGIPVVRRPDGRYEGVEAVVDKDLAAALLAHELGADALLILTDVPNVML HCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEE HYGTPQARPLERVLASELRRYQVEGHFASGSMGPKVEAALRFVSRGSTRRSIIAALDHAR ECCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH DALEGRAGTHVLPDP HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11523892; 12622808 [H]