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The map label for this gene is 221632575

Identifier: 221632575

GI number: 221632575

Start: 542961

End: 545306

Strand: Reverse

Name: 221632575

Synonym: trd_0550

Alternate gene names: NA

Gene position: 545306-542961 (Counterclockwise)

Preceding gene: 221632576

Following gene: 221632574

Centisome position: 27.22

GC content: 62.57

Gene sequence:

>2346_bases
ATGACGATCACTACTGATATCTTACGTCAAGCTGCTCAAAAGTACCAGGCGCTCGGCTTGCCAGCCATCCCCGCCTATCG
GGGAAGACCGCTGATCCTTTGGCAGGTGTACCAGCAGCGCCTGCCGGAGCCTGAGGAGGTCGAAGGGTGGCCGTGGTCGA
AGGCCGACGGCGTCGCCGTCATCTGCGGCCACCAGACGACCTTCGGCGGCTTCTGGTGGTGTCTCGACGTCGAGCATCAG
CATCGTGTCGAAGCCGAACGCTGGCTCGACGCAACGCACCCCGGCTGGCGCCACGGACTGGTCGCTGAAAGCCAACGCAA
CGGGTTGCATGTCTATTGCCGCAGTCGCCAGCCAGTCCGTACCCAAAGACATGAGTGGGGTGACATCAAAGGCAGTGGTA
GCCTCGTCTACGCTCCACCGAGCCGGCGCTACAAGCCGGATGCGACCCAGGATTACGAGTGGCTGTCGTTCGACCCGACC
AATGCCTTACAGCTGGAGCCGGCCGACCTACCCTGGCCAACCGACAACGGCCACCAGCAGGGACCACTGGGACAACCATC
GCTGGCCGAGACACTCAAAACCACTATCCCGGTCGGTAACCGCCACAACACCATGGTCCGGGTCGCCGGCTGGCTGCGGG
GTGTCGGTCATCTCGAACCGGACGAAATCTTGACCGTCCTCCAGCAGATGAACCGGCGGTGTGAAGTGCCGTTGCCGGAC
CAGGAGCTGGTGGAGATTGCCAGGTCATCCAGCAAGTGGTCGGTGAACCCGACCCTGGTCGCCGGGAACGGCCACCAGCA
ATCGACCGACAGTGGCGGCCACCCTGTCCGCAAGCCGGTCCGGTTCACCGGCCGAGAAACCCCACCGTTGCGTCCCTGGC
TGGTGGCTGACGTCATCCCCGAAGGCCTACCAGCGTTGATCTACGGGAACGGCGGGTCGGCGAAGAGCTATTTGGCGCTG
TTGGCCGGGCTGGCGGTCGCTGCTGGTGTCCCCTGGCTCGGCAAGCCAACGGTGCAGCGACCAACACTGTTCGCCGATTT
CGAGTTGGATGAGACTGAGCAGCATCGCCGAGCCAGACGGTTGGCAATCGGCTTAGGACTGGCGGACGTGCCAGAGGTCT
TCGAGTATGTCCAGCTGGCTGACCTGTCCCCCCGGGATGCCGAAGCCGTCCTAGTCGACTGGGTGGCCGCTCATCCCGAT
GGGTTGGTGATCGTGGATTCGGTCGGAGCAGCGGCCATCACCGACCTGGAGAAGGCTCAGGCCGTGGTGCAGGTTTTCCG
AAACCTTCGCTCCCTGAACCCTGGCGGCCTGCTGCTGGTGGACCACCAGGCCAAACTCCAACCTGGCCAGGACTACCGGG
ACAAGACGCCGTTCGGCTCGGTCTACAAGTACAACTTGAGCCGGGTCGTCTGGCAGTCGGAGCTGGTCGAATCGCAACCC
GGGGAAGCCTGGGTTATCCTGCGGAACACGAAGAACAACCTGGGACCGCTGCAGGGGGAGATCGGCGTGAAGCTTAGTTT
CGGGGAGGGGTTGGTGACGGTGACCCCGGTCGCTCTCACCACCGGTCCCCTGGTCGAGCGAGCCAGCTTGGAGAGTCGGA
TCATCGCAGTGCTCAAAGAGCATGGACCCTCCACCGCTCAGGAAATCGCCGACCGGCTCGAGGCGAACCCGAAGAGCGTC
AAGGCCAAGCTCTCCCGGCTCAAGGGACTCGGCCGGGTGGTCGTTACGGGAACGGTCGGACGAGAACACCTTTGGTCGCT
ACCGGGTACCCCAGGACACTCGCCTGACGACCAGGAGCAAGCTTCGTTAACGTTAACGGATAATACTGCTGTTAACGTTA
ACGCTGGACCCGGAAAACATCACACTCCGCATCGTGAAGCCAAAATCGACGCACAAGACCCTGGCGGGGAAGCCGGAAAA
CATCACACTTGGCTTCACGAAGCCCAAAACGACGAACACACCCCCGCCGGGGAAGCTGAAAAACATCACGCTTGGCTTCC
CGATGCGAAAAACGCCGTCTGCGAAGTGTGTGGCCAGCTCTTCACCTGGTCAGGCCGGGGTCAACCGGCACGTTACTGCA
GCCGGACCTGCCAGATGAAGGCCTACCGCCAGCGGAGCACGCCTGTAGACGCACCTGGTCGAGGCAACCCAGGAAGCCTG
GCCACGGAGACGGAGACGAACGGCCACCCGCCTGATCCGTCGGCCTGTCTCGATTGCGGCAAGCGGATCGACGCCGAAGG
GTTCCAATACATCTGTCCACCGTGCATGAAACTCCGATACGACAAGCTGCAGCGGCAGTATCCCGAGAAACTAATCCGCT
GGCTGGAGCAACAGCACGGCCGTTGA

Upstream 100 bases:

>100_bases
ATGGCCGTACGCAGTCCGGTCCGTTCTGATCCGCTGATGCCTGACTGCAAAACAACGGCCAAGGGTAACCCCCTTGGCCG
CCAACCGAATGGAGGGTATC

Downstream 100 bases:

>100_bases
GCCGGTACCCCCGGGGGTCGTTCTCCGGCACCAACCAGTGCTCCCCCGTTAACGGTTAACATCCTTTGGGGACCGTTAAC
CGTTAACGCTCGCCGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger CHC2-Family Protein

Number of amino acids: Translated: 781; Mature: 780

Protein sequence:

>781_residues
MTITTDILRQAAQKYQALGLPAIPAYRGRPLILWQVYQQRLPEPEEVEGWPWSKADGVAVICGHQTTFGGFWWCLDVEHQ
HRVEAERWLDATHPGWRHGLVAESQRNGLHVYCRSRQPVRTQRHEWGDIKGSGSLVYAPPSRRYKPDATQDYEWLSFDPT
NALQLEPADLPWPTDNGHQQGPLGQPSLAETLKTTIPVGNRHNTMVRVAGWLRGVGHLEPDEILTVLQQMNRRCEVPLPD
QELVEIARSSSKWSVNPTLVAGNGHQQSTDSGGHPVRKPVRFTGRETPPLRPWLVADVIPEGLPALIYGNGGSAKSYLAL
LAGLAVAAGVPWLGKPTVQRPTLFADFELDETEQHRRARRLAIGLGLADVPEVFEYVQLADLSPRDAEAVLVDWVAAHPD
GLVIVDSVGAAAITDLEKAQAVVQVFRNLRSLNPGGLLLVDHQAKLQPGQDYRDKTPFGSVYKYNLSRVVWQSELVESQP
GEAWVILRNTKNNLGPLQGEIGVKLSFGEGLVTVTPVALTTGPLVERASLESRIIAVLKEHGPSTAQEIADRLEANPKSV
KAKLSRLKGLGRVVVTGTVGREHLWSLPGTPGHSPDDQEQASLTLTDNTAVNVNAGPGKHHTPHREAKIDAQDPGGEAGK
HHTWLHEAQNDEHTPAGEAEKHHAWLPDAKNAVCEVCGQLFTWSGRGQPARYCSRTCQMKAYRQRSTPVDAPGRGNPGSL
ATETETNGHPPDPSACLDCGKRIDAEGFQYICPPCMKLRYDKLQRQYPEKLIRWLEQQHGR

Sequences:

>Translated_781_residues
MTITTDILRQAAQKYQALGLPAIPAYRGRPLILWQVYQQRLPEPEEVEGWPWSKADGVAVICGHQTTFGGFWWCLDVEHQ
HRVEAERWLDATHPGWRHGLVAESQRNGLHVYCRSRQPVRTQRHEWGDIKGSGSLVYAPPSRRYKPDATQDYEWLSFDPT
NALQLEPADLPWPTDNGHQQGPLGQPSLAETLKTTIPVGNRHNTMVRVAGWLRGVGHLEPDEILTVLQQMNRRCEVPLPD
QELVEIARSSSKWSVNPTLVAGNGHQQSTDSGGHPVRKPVRFTGRETPPLRPWLVADVIPEGLPALIYGNGGSAKSYLAL
LAGLAVAAGVPWLGKPTVQRPTLFADFELDETEQHRRARRLAIGLGLADVPEVFEYVQLADLSPRDAEAVLVDWVAAHPD
GLVIVDSVGAAAITDLEKAQAVVQVFRNLRSLNPGGLLLVDHQAKLQPGQDYRDKTPFGSVYKYNLSRVVWQSELVESQP
GEAWVILRNTKNNLGPLQGEIGVKLSFGEGLVTVTPVALTTGPLVERASLESRIIAVLKEHGPSTAQEIADRLEANPKSV
KAKLSRLKGLGRVVVTGTVGREHLWSLPGTPGHSPDDQEQASLTLTDNTAVNVNAGPGKHHTPHREAKIDAQDPGGEAGK
HHTWLHEAQNDEHTPAGEAEKHHAWLPDAKNAVCEVCGQLFTWSGRGQPARYCSRTCQMKAYRQRSTPVDAPGRGNPGSL
ATETETNGHPPDPSACLDCGKRIDAEGFQYICPPCMKLRYDKLQRQYPEKLIRWLEQQHGR
>Mature_780_residues
TITTDILRQAAQKYQALGLPAIPAYRGRPLILWQVYQQRLPEPEEVEGWPWSKADGVAVICGHQTTFGGFWWCLDVEHQH
RVEAERWLDATHPGWRHGLVAESQRNGLHVYCRSRQPVRTQRHEWGDIKGSGSLVYAPPSRRYKPDATQDYEWLSFDPTN
ALQLEPADLPWPTDNGHQQGPLGQPSLAETLKTTIPVGNRHNTMVRVAGWLRGVGHLEPDEILTVLQQMNRRCEVPLPDQ
ELVEIARSSSKWSVNPTLVAGNGHQQSTDSGGHPVRKPVRFTGRETPPLRPWLVADVIPEGLPALIYGNGGSAKSYLALL
AGLAVAAGVPWLGKPTVQRPTLFADFELDETEQHRRARRLAIGLGLADVPEVFEYVQLADLSPRDAEAVLVDWVAAHPDG
LVIVDSVGAAAITDLEKAQAVVQVFRNLRSLNPGGLLLVDHQAKLQPGQDYRDKTPFGSVYKYNLSRVVWQSELVESQPG
EAWVILRNTKNNLGPLQGEIGVKLSFGEGLVTVTPVALTTGPLVERASLESRIIAVLKEHGPSTAQEIADRLEANPKSVK
AKLSRLKGLGRVVVTGTVGREHLWSLPGTPGHSPDDQEQASLTLTDNTAVNVNAGPGKHHTPHREAKIDAQDPGGEAGKH
HTWLHEAQNDEHTPAGEAEKHHAWLPDAKNAVCEVCGQLFTWSGRGQPARYCSRTCQMKAYRQRSTPVDAPGRGNPGSLA
TETETNGHPPDPSACLDCGKRIDAEGFQYICPPCMKLRYDKLQRQYPEKLIRWLEQQHGR

Specific function: Unknown

COG id: COG3598

COG function: function code L; RecA-family ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86201; Mature: 86070

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITTDILRQAAQKYQALGLPAIPAYRGRPLILWQVYQQRLPEPEEVEGWPWSKADGVAV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEE
ICGHQTTFGGFWWCLDVEHQHRVEAERWLDATHPGWRHGLVAESQRNGLHVYCRSRQPVR
EECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
TQRHEWGDIKGSGSLVYAPPSRRYKPDATQDYEWLSFDPTNALQLEPADLPWPTDNGHQQ
HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
GPLGQPSLAETLKTTIPVGNRHNTMVRVAGWLRGVGHLEPDEILTVLQQMNRRCEVPLPD
CCCCCCHHHHHHHHHCCCCCCCCHHEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH
QELVEIARSSSKWSVNPTLVAGNGHQQSTDSGGHPVRKPVRFTGRETPPLRPWLVADVIP
HHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCC
EGLPALIYGNGGSAKSYLALLAGLAVAAGVPWLGKPTVQRPTLFADFELDETEQHRRARR
CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
LAIGLGLADVPEVFEYVQLADLSPRDAEAVLVDWVAAHPDGLVIVDSVGAAAITDLEKAQ
HHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCEEEEECCCCHHHHHHHHHH
AVVQVFRNLRSLNPGGLLLVDHQAKLQPGQDYRDKTPFGSVYKYNLSRVVWQSELVESQP
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
GEAWVILRNTKNNLGPLQGEIGVKLSFGEGLVTVTPVALTTGPLVERASLESRIIAVLKE
CCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEHCCCCCHHHHHHHHHHHHHHHHH
HGPSTAQEIADRLEANPKSVKAKLSRLKGLGRVVVTGTVGREHLWSLPGTPGHSPDDQEQ
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCC
ASLTLTDNTAVNVNAGPGKHHTPHREAKIDAQDPGGEAGKHHTWLHEAQNDEHTPAGEAE
CEEEEECCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
KHHAWLPDAKNAVCEVCGQLFTWSGRGQPARYCSRTCQMKAYRQRSTPVDAPGRGNPGSL
CCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ATETETNGHPPDPSACLDCGKRIDAEGFQYICPPCMKLRYDKLQRQYPEKLIRWLEQQHG
EECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure 
TITTDILRQAAQKYQALGLPAIPAYRGRPLILWQVYQQRLPEPEEVEGWPWSKADGVAV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEE
ICGHQTTFGGFWWCLDVEHQHRVEAERWLDATHPGWRHGLVAESQRNGLHVYCRSRQPVR
EECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHH
TQRHEWGDIKGSGSLVYAPPSRRYKPDATQDYEWLSFDPTNALQLEPADLPWPTDNGHQQ
HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
GPLGQPSLAETLKTTIPVGNRHNTMVRVAGWLRGVGHLEPDEILTVLQQMNRRCEVPLPD
CCCCCCHHHHHHHHHCCCCCCCCHHEEHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCH
QELVEIARSSSKWSVNPTLVAGNGHQQSTDSGGHPVRKPVRFTGRETPPLRPWLVADVIP
HHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCC
EGLPALIYGNGGSAKSYLALLAGLAVAAGVPWLGKPTVQRPTLFADFELDETEQHRRARR
CCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
LAIGLGLADVPEVFEYVQLADLSPRDAEAVLVDWVAAHPDGLVIVDSVGAAAITDLEKAQ
HHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCCEEEEECCCCHHHHHHHHHH
AVVQVFRNLRSLNPGGLLLVDHQAKLQPGQDYRDKTPFGSVYKYNLSRVVWQSELVESQP
HHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
GEAWVILRNTKNNLGPLQGEIGVKLSFGEGLVTVTPVALTTGPLVERASLESRIIAVLKE
CCEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEHCCCCCHHHHHHHHHHHHHHHHH
HGPSTAQEIADRLEANPKSVKAKLSRLKGLGRVVVTGTVGREHLWSLPGTPGHSPDDQEQ
CCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCCCCCCCCCC
ASLTLTDNTAVNVNAGPGKHHTPHREAKIDAQDPGGEAGKHHTWLHEAQNDEHTPAGEAE
CEEEEECCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
KHHAWLPDAKNAVCEVCGQLFTWSGRGQPARYCSRTCQMKAYRQRSTPVDAPGRGNPGSL
CCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
ATETETNGHPPDPSACLDCGKRIDAEGFQYICPPCMKLRYDKLQRQYPEKLIRWLEQQHG
EECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA