| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
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The map label for this gene is 221632559
Identifier: 221632559
GI number: 221632559
Start: 531388
End: 531729
Strand: Reverse
Name: 221632559
Synonym: trd_0534
Alternate gene names: NA
Gene position: 531729-531388 (Counterclockwise)
Preceding gene: 221632560
Following gene: 221632558
Centisome position: 26.55
GC content: 60.23
Gene sequence:
>342_bases GTGGCTGAGCGTCGACTCTATATTTGGCTCGAGCGTGATCCACTGGCCGGACCACCGGATACTGCCATCGAGGACGTGCC AGGACGGGCCGACCTCGATCTCCTGGCGGAAGCCATCCGACAAGGGAAACTCGGTCGATACCTTCCGACCAAGCTCGCTC TTTCCCGCCACCGTGTCCCCTTGCTGCCGTCCGGTTACCGCCGAGTCAATGTCGCGAACCTGCTCCGACAATACCGTATT CCCTATCGAACTCGATTAGAAGTGCTGACGGATGCCTCATCCCTCCAAGACTGTTCGTCCCGAATCGCGCGTTCGTCGCG GGAGCACGAGCCATGTACGTGA
Upstream 100 bases:
>100_bases AGGGCGACGATCTGCCTCTTCCCAAAGCTGAGTCCTGGATTCCCTTCACCTCCTGATCCTCGCCTCCCTTCTCGTGATAT CGGGGCAGATGGAGCGTCTT
Downstream 100 bases:
>100_bases CCCCGAAGGAGCTCGACCGGTTGACCGTGTTCACTTTGGCTGAACTCGCCCGTCGCCACCGCGCACGCGGGATCAAGCTC AATTATACGGAGGCTGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAERRLYIWLERDPLAGPPDTAIEDVPGRADLDLLAEAIRQGKLGRYLPTKLALSRHRVPLLPSGYRRVNVANLLRQYRI PYRTRLEVLTDASSLQDCSSRIARSSREHEPCT
Sequences:
>Translated_113_residues MAERRLYIWLERDPLAGPPDTAIEDVPGRADLDLLAEAIRQGKLGRYLPTKLALSRHRVPLLPSGYRRVNVANLLRQYRI PYRTRLEVLTDASSLQDCSSRIARSSREHEPCT >Mature_112_residues AERRLYIWLERDPLAGPPDTAIEDVPGRADLDLLAEAIRQGKLGRYLPTKLALSRHRVPLLPSGYRRVNVANLLRQYRIP YRTRLEVLTDASSLQDCSSRIARSSREHEPCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12923; Mature: 12792
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERRLYIWLERDPLAGPPDTAIEDVPGRADLDLLAEAIRQGKLGRYLPTKLALSRHRVP CCCCEEEEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC LLPSGYRRVNVANLLRQYRIPYRTRLEVLTDASSLQDCSSRIARSSREHEPCT CCCCCCCEECHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AERRLYIWLERDPLAGPPDTAIEDVPGRADLDLLAEAIRQGKLGRYLPTKLALSRHRVP CCCEEEEEEECCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC LLPSGYRRVNVANLLRQYRIPYRTRLEVLTDASSLQDCSSRIARSSREHEPCT CCCCCCCEECHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA