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The map label for this gene is 221632436

Identifier: 221632436

GI number: 221632436

Start: 408270

End: 408974

Strand: Reverse

Name: 221632436

Synonym: trd_0408

Alternate gene names: NA

Gene position: 408974-408270 (Counterclockwise)

Preceding gene: 221632437

Following gene: 221632435

Centisome position: 20.42

GC content: 63.83

Gene sequence:

>705_bases
GTGTTGCTCGATCGGCAACAGTCGACTGAGGAGGTCATGAAGATGCGTACGGTGCTCGATCGAATCCGAGGTTGGTTCGT
ACTCGCATTGACGGTCGTTCTCGCTTCGCTTGTCGTGAGCGCGTGTCGTGGGACCGAACCGACACCGACGCCTGCTCCCA
GCCCAACGCCGGCTGCGGCAGTGCAGCCGAGTCCGACCCCGCAGCCGACACCGACGGCTACCCCGACTCCGACCCCCATG
CCGACGCCGACCCCAATGGCCGCAACGCCGACGATGGGGCACGGCATGAGTGGACACGGTATGGGCAGCGCCATGCCCGG
TGTCAGCAACGAATTCCGGGCCGGCACGTTGGTCATCCGCAACGTGTGGGCACGAGCTGCCTCCCAGGCCGATGCCCTGA
GCGCTGTCTACATGGTGATCGAGAACACTGGCGACCAGCCCGACCGCTTGCTGCATGCCCACTGCGACGTGGCCGGGACG
GTCGAGCTCCACGAAACCAAGATGGAAGGCGGTGTCATGAAAATGCAGCCGGTCGACGGCATCGATATCCCCGCCAAGGG
GACGGTCGAGCTCAAGCCCGGTGGGCTGCACATCATGCTCATCGGGTTGACGCGCGACTTGAATCCCGGTGACGAGATCG
AATTGGAACTCCACTTCGACAAGGCAGGTCATGTCCCGGTCAAGGCAGTCGTCCAGAAGCCGTGA

Upstream 100 bases:

>100_bases
TCGTCTTGGATACCCAGGGGAAACTGCGAGCCGTCCTCCCGTTCGGGCTCACCCCGGAGCAGGTGGCGAGCGACCTCCGT
GCCCTGTTGCGTCGCTGAGC

Downstream 100 bases:

>100_bases
GCTCTCGGTCGTAGAGCCGGTGGTACAGGGGCAGGTGCTCACCTGCCCCTGCATCGTTCTCGCAGGCCGGTGCTAGCGGG
CAGCGGGGATGCTGCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLLDRQQSTEEVMKMRTVLDRIRGWFVLALTVVLASLVVSACRGTEPTPTPAPSPTPAAAVQPSPTPQPTPTATPTPTPM
PTPTPMAATPTMGHGMSGHGMGSAMPGVSNEFRAGTLVIRNVWARAASQADALSAVYMVIENTGDQPDRLLHAHCDVAGT
VELHETKMEGGVMKMQPVDGIDIPAKGTVELKPGGLHIMLIGLTRDLNPGDEIELELHFDKAGHVPVKAVVQKP

Sequences:

>Translated_234_residues
MLLDRQQSTEEVMKMRTVLDRIRGWFVLALTVVLASLVVSACRGTEPTPTPAPSPTPAAAVQPSPTPQPTPTATPTPTPM
PTPTPMAATPTMGHGMSGHGMGSAMPGVSNEFRAGTLVIRNVWARAASQADALSAVYMVIENTGDQPDRLLHAHCDVAGT
VELHETKMEGGVMKMQPVDGIDIPAKGTVELKPGGLHIMLIGLTRDLNPGDEIELELHFDKAGHVPVKAVVQKP
>Mature_234_residues
MLLDRQQSTEEVMKMRTVLDRIRGWFVLALTVVLASLVVSACRGTEPTPTPAPSPTPAAAVQPSPTPQPTPTATPTPTPM
PTPTPMAATPTMGHGMSGHGMGSAMPGVSNEFRAGTLVIRNVWARAASQADALSAVYMVIENTGDQPDRLLHAHCDVAGT
VELHETKMEGGVMKMQPVDGIDIPAKGTVELKPGGLHIMLIGLTRDLNPGDEIELELHFDKAGHVPVKAVVQKP

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 24753; Mature: 24753

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDRQQSTEEVMKMRTVLDRIRGWFVLALTVVLASLVVSACRGTEPTPTPAPSPTPAAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VQPSPTPQPTPTATPTPTPMPTPTPMAATPTMGHGMSGHGMGSAMPGVSNEFRAGTLVIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
NVWARAASQADALSAVYMVIENTGDQPDRLLHAHCDVAGTVELHETKMEGGVMKMQPVDG
HHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCEEEEEEEEEEHHCCCEEEECCCCC
IDIPAKGTVELKPGGLHIMLIGLTRDLNPGDEIELELHFDKAGHVPVKAVVQKP
CCCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCC
>Mature Secondary Structure
MLLDRQQSTEEVMKMRTVLDRIRGWFVLALTVVLASLVVSACRGTEPTPTPAPSPTPAAA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
VQPSPTPQPTPTATPTPTPMPTPTPMAATPTMGHGMSGHGMGSAMPGVSNEFRAGTLVIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
NVWARAASQADALSAVYMVIENTGDQPDRLLHAHCDVAGTVELHETKMEGGVMKMQPVDG
HHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCEEEEEEEEEEHHCCCEEEECCCCC
IDIPAKGTVELKPGGLHIMLIGLTRDLNPGDEIELELHFDKAGHVPVKAVVQKP
CCCCCCCEEEECCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA