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The map label for this gene is 221632402

Identifier: 221632402

GI number: 221632402

Start: 377712

End: 378350

Strand: Reverse

Name: 221632402

Synonym: trd_0374

Alternate gene names: NA

Gene position: 378350-377712 (Counterclockwise)

Preceding gene: 221632404

Following gene: 221632401

Centisome position: 18.89

GC content: 63.85

Gene sequence:

>639_bases
GTGCAATCGGTCGCACGCGTCATCACACGGTTGGAGACCACTCAGGCGGTCATCGCCCTTACCTTCGACTGCGGGGCCGA
CCGTGGTTATGCGGAGGAGATTCTCGACGAACTGGCTCGCCACGGCATCCGTGCCACTTTCGGAATGACGGGAGCTTGGG
CACGGGCGAATCCCGACCTCGTCGCGCGCATGCTCCGTGAAGGACATCGCCTCATCAATCACTCCGATACGCACCCCTCC
TTCACCGGTCGCTCGACCGGATCTCCACCGTTGTCGGTCGACCAGCGCGCAGCCGAAATCCGAAGAGCCGAGCAGGCAGT
CGCTGCCGTCTCGGGCAGCGAAACCACCATGCGCCCCTATTTTCGGCCACCCTACGGGGATTACGACGAGGCACTCCTTA
CGCTCCTCCCGGAACTCGGTTACAGCGTCGTCGTCATGTGGACAGTCGATTCCCTCGGCTGGCGCGGCATTCCGCCCGAA
GAGGTCGTCACGCGCGTTCTGGCGGCAGCACAACCGGGTGCCATCGTGCTCCTTCATGTCGGTGCGCAGTCGACCGATGC
CGCTGCACTCCCGCAGCTGATCGCAGCTCTCCAAGAGCGTGGATACGGCTTCGTCACCACCGATGCCCAACTCGGGTGA

Upstream 100 bases:

>100_bases
GAACCCGACTCCGCCTCCACCGACCCCACCCATCGAACCGACGCCACTCACCACGCCCACTTCACCGTCGCTATCGTCCC
CCACCCCTACCTCCCTTCCG

Downstream 100 bases:

>100_bases
CTCCACAACCGATGTCAGGAAAAATTTGACGAAGTGTGCGTCGCAGTCCGCTGTCTGCGACCGCTTTGGCATACTCTCTG
CAGGAGCTGTGCCCGAGCAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MQSVARVITRLETTQAVIALTFDCGADRGYAEEILDELARHGIRATFGMTGAWARANPDLVARMLREGHRLINHSDTHPS
FTGRSTGSPPLSVDQRAAEIRRAEQAVAAVSGSETTMRPYFRPPYGDYDEALLTLLPELGYSVVVMWTVDSLGWRGIPPE
EVVTRVLAAAQPGAIVLLHVGAQSTDAAALPQLIAALQERGYGFVTTDAQLG

Sequences:

>Translated_212_residues
MQSVARVITRLETTQAVIALTFDCGADRGYAEEILDELARHGIRATFGMTGAWARANPDLVARMLREGHRLINHSDTHPS
FTGRSTGSPPLSVDQRAAEIRRAEQAVAAVSGSETTMRPYFRPPYGDYDEALLTLLPELGYSVVVMWTVDSLGWRGIPPE
EVVTRVLAAAQPGAIVLLHVGAQSTDAAALPQLIAALQERGYGFVTTDAQLG
>Mature_212_residues
MQSVARVITRLETTQAVIALTFDCGADRGYAEEILDELARHGIRATFGMTGAWARANPDLVARMLREGHRLINHSDTHPS
FTGRSTGSPPLSVDQRAAEIRRAEQAVAAVSGSETTMRPYFRPPYGDYDEALLTLLPELGYSVVVMWTVDSLGWRGIPPE
EVVTRVLAAAQPGAIVLLHVGAQSTDAAALPQLIAALQERGYGFVTTDAQLG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 22884; Mature: 22884

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVARVITRLETTQAVIALTFDCGADRGYAEEILDELARHGIRATFGMTGAWARANPDL
CCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHH
VARMLREGHRLINHSDTHPSFTGRSTGSPPLSVDQRAAEIRRAEQAVAAVSGSETTMRPY
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FRPPYGDYDEALLTLLPELGYSVVVMWTVDSLGWRGIPPEEVVTRVLAAAQPGAIVLLHV
CCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
GAQSTDAAALPQLIAALQERGYGFVTTDAQLG
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC
>Mature Secondary Structure
MQSVARVITRLETTQAVIALTFDCGADRGYAEEILDELARHGIRATFGMTGAWARANPDL
CCHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCHHH
VARMLREGHRLINHSDTHPSFTGRSTGSPPLSVDQRAAEIRRAEQAVAAVSGSETTMRPY
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FRPPYGDYDEALLTLLPELGYSVVVMWTVDSLGWRGIPPEEVVTRVLAAAQPGAIVLLHV
CCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE
GAQSTDAAALPQLIAALQERGYGFVTTDAQLG
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]