Definition Thermomicrobium roseum DSM 5159 chromosome, complete genome.
Accession NC_011959
Length 2,003,006

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The map label for this gene is 221632384

Identifier: 221632384

GI number: 221632384

Start: 358117

End: 358383

Strand: Reverse

Name: 221632384

Synonym: trd_0356

Alternate gene names: NA

Gene position: 358383-358117 (Counterclockwise)

Preceding gene: 221632385

Following gene: 221632381

Centisome position: 17.89

GC content: 62.92

Gene sequence:

>267_bases
ATGGGACGGGTGAACACGACGAAGGCACGGCGCAAGACGAGCAAACGCACCGCTCGGGCGAGCGCACCCGTCCCCGCTGG
TTCGGTATCCCCTTCACCGGACAAACCCTCCGGAAGCCGGTCAGCGACGCAACCCCAAGGAATCATCAGCCCATGGGGGC
GAGTCGACGAGGAGTATGCGCTGATCAAAGCTGATCTGACGCGTCTCCTTTGGGTCACCGCTCTGTTGCTTGGGCTGCTC
CTGTTGTTGGCGATCGTCCTGCGGTGA

Upstream 100 bases:

>100_bases
CGGCAACCTGGCACCTCGAGCGGGGCATGTTGGTCGAAGTCCGCCGCGCGGTCAAATGACAGCGTGCTATACTGCTCAGA
GGATCGGGAAGGTAGACGGT

Downstream 100 bases:

>100_bases
ACCCGACGCGAAAAGCCCTCGTCCTCTCGAGGGGACGAGGGCTCGCGGATCTGCGGCAACGGACTCACTCGCTGATCGTC
TCGTCGATGTCGAACTCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MGRVNTTKARRKTSKRTARASAPVPAGSVSPSPDKPSGSRSATQPQGIISPWGRVDEEYALIKADLTRLLWVTALLLGLL
LLLAIVLR

Sequences:

>Translated_88_residues
MGRVNTTKARRKTSKRTARASAPVPAGSVSPSPDKPSGSRSATQPQGIISPWGRVDEEYALIKADLTRLLWVTALLLGLL
LLLAIVLR
>Mature_87_residues
GRVNTTKARRKTSKRTARASAPVPAGSVSPSPDKPSGSRSATQPQGIISPWGRVDEEYALIKADLTRLLWVTALLLGLLL
LLAIVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9448; Mature: 9317

Theoretical pI: Translated: 12.03; Mature: 12.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVNTTKARRKTSKRTARASAPVPAGSVSPSPDKPSGSRSATQPQGIISPWGRVDEEYA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LIKADLTRLLWVTALLLGLLLLLAIVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GRVNTTKARRKTSKRTARASAPVPAGSVSPSPDKPSGSRSATQPQGIISPWGRVDEEYA
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LIKADLTRLLWVTALLLGLLLLLAIVLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA