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The map label for this gene is 221632362

Identifier: 221632362

GI number: 221632362

Start: 336032

End: 336451

Strand: Reverse

Name: 221632362

Synonym: trd_0333

Alternate gene names: NA

Gene position: 336451-336032 (Counterclockwise)

Preceding gene: 221632368

Following gene: 221632361

Centisome position: 16.8

GC content: 55.95

Gene sequence:

>420_bases
ATGACGGTCACGCGAGCGCAAGAGTCGCGATCAGCGACGACGCGTGGAATCAGCGCCTATCGAGGCTATCGACCACCACC
TGGCATGATTTCCTGGGCATTTCACCGCATTACCGGCCTCGGGGTTCTGTTGTTCCTCTTACTGCACATCGTGGACATCT
TCCTCGTGAACTACGGTCCTGAGGTGTTCAACGAGTTGCTCTTTCTCTACCGGCACCCCGTTTTCCGGATCGGCGAAATC
ATCTTGGTTGGCGCGGTCTATTATCACGCAGCTAATGGTGTACGCATCATGCTCATCGACTTCTGGCCAGCCGCTTATCG
TTACGAACGGCAGCTCTTCTATGGTGTCATGGCGGTCTTCCTGCTCGCCTTCATCCCCACTGCCTTCCTGATGATCCGCG
CGATCATCCAAGCTGGCTGA

Upstream 100 bases:

>100_bases
TTGGTCGTTGTTGCAACGCCAGAATGCCTCGTACACTAGCGATAGCGCAAACGTGGGACGCTCGAAGGATGTCCCGACGC
GCGAGGGATGGAGGTTTCAA

Downstream 100 bases:

>100_bases
TGAAAAGGAGTTATTCCGATGACGATCGCACGACCGCACCTCGGACGAGAGCGACCTTCTGGCGGATTCGAGCTGTACAG
CTGGTATTACTTCCGGATCA

Product: succinate dehydrogenase, cytochrome subunit

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Cytochrome B Subunit; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase Membrane Subunit; Succinate Dehydrogenase Cytochrome Subunit; Succinate Dehydrogenase SdhC; Succinate Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTVTRAQESRSATTRGISAYRGYRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGPEVFNELLFLYRHPVFRIGEI
ILVGAVYYHAANGVRIMLIDFWPAAYRYERQLFYGVMAVFLLAFIPTAFLMIRAIIQAG

Sequences:

>Translated_139_residues
MTVTRAQESRSATTRGISAYRGYRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGPEVFNELLFLYRHPVFRIGEI
ILVGAVYYHAANGVRIMLIDFWPAAYRYERQLFYGVMAVFLLAFIPTAFLMIRAIIQAG
>Mature_138_residues
TVTRAQESRSATTRGISAYRGYRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGPEVFNELLFLYRHPVFRIGEII
LVGAVYYHAANGVRIMLIDFWPAAYRYERQLFYGVMAVFLLAFIPTAFLMIRAIIQAG

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 15902; Mature: 15771

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTRAQESRSATTRGISAYRGYRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGP
CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EVFNELLFLYRHPVFRIGEIILVGAVYYHAANGVRIMLIDFWPAAYRYERQLFYGVMAVF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LLAFIPTAFLMIRAIIQAG
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVTRAQESRSATTRGISAYRGYRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGP
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EVFNELLFLYRHPVFRIGEIILVGAVYYHAANGVRIMLIDFWPAAYRYERQLFYGVMAVF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
LLAFIPTAFLMIRAIIQAG
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA