| Definition | Thermomicrobium roseum DSM 5159 chromosome, complete genome. |
|---|---|
| Accession | NC_011959 |
| Length | 2,003,006 |
Click here to switch to the map view.
The map label for this gene is 221632190
Identifier: 221632190
GI number: 221632190
Start: 165115
End: 165378
Strand: Reverse
Name: 221632190
Synonym: trd_0156
Alternate gene names: NA
Gene position: 165378-165115 (Counterclockwise)
Preceding gene: 221632191
Following gene: 221632189
Centisome position: 8.26
GC content: 65.53
Gene sequence:
>264_bases GTGACGCGGATCAGGCTCTTCACACATCCGATCTGCTCTGGTTGCGCGGAAGCGCTCGCGCTGGTGCAGCGCCTGGCTGC CGAAGAGCCGGAGATTCAGGTAGAAGTGATCAGCCTGGCATCGGCCGCTGGTCGCGCCGCAGCGCAGGAAGCAGGGGTCG TCGTGGTTCCGACGCTCCTAATCGACGGCGAGCGCCTCACTGGTGTCCCGACACTCGAGGAACTTCGCGCACGGGTGCAG CACGCTACCCGAACAGGAGGCTGA
Upstream 100 bases:
>100_bases GCGAACTCCTGAGTGGCCCAGCGGCGGTCGCCGCCTACGATGCGTTCATGACGCGCCGCGGGCTCGATGACTGCGTTCAT TGCGAGGGGTACGAACTGCC
Downstream 100 bases:
>100_bases CGATGAGCGTCGCGACCTGGAGCCCGACGAAAAGCGGGCAACGCTACGCTGACGTTCCGGAAGAACGCAAGCGGGAACTC TTCGAAGAAGTCAAGAGCGA
Product: thioredoxin:Glutaredoxin:Thioredoxins/glutaredox i n
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTRIRLFTHPICSGCAEALALVQRLAAEEPEIQVEVISLASAAGRAAAQEAGVVVVPTLLIDGERLTGVPTLEELRARVQ HATRTGG
Sequences:
>Translated_87_residues MTRIRLFTHPICSGCAEALALVQRLAAEEPEIQVEVISLASAAGRAAAQEAGVVVVPTLLIDGERLTGVPTLEELRARVQ HATRTGG >Mature_86_residues TRIRLFTHPICSGCAEALALVQRLAAEEPEIQVEVISLASAAGRAAAQEAGVVVVPTLLIDGERLTGVPTLEELRARVQH ATRTGG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9158; Mature: 9027
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIRLFTHPICSGCAEALALVQRLAAEEPEIQVEVISLASAAGRAAAQEAGVVVVPTLL CCEEEHHHCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHCCEEEEEEEE IDGERLTGVPTLEELRARVQHATRTGG ECCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TRIRLFTHPICSGCAEALALVQRLAAEEPEIQVEVISLASAAGRAAAQEAGVVVVPTLL CEEEHHHCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHHHCCEEEEEEEE IDGERLTGVPTLEELRARVQHATRTGG ECCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA