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The map label for this gene is fadF [H]

Identifier: 221632184

GI number: 221632184

Start: 159696

End: 160997

Strand: Reverse

Name: fadF [H]

Synonym: trd_0150

Alternate gene names: 221632184

Gene position: 160997-159696 (Counterclockwise)

Preceding gene: 221632185

Following gene: 221632183

Centisome position: 8.04

GC content: 63.67

Gene sequence:

>1302_bases
ATGGATCCGAGCCTGGAAAAGGTGCAGGAAGTCTGGGAGCGAGAAACCGCGATCGTCGAAGGGGTCGATATTTCCGGTCC
TTGGAACCGGATGTTCGGCCAACGCGTCATCTGGGACTATACCCCTGAGCTGATCGAAGAGATCGCTCGCTTGCCTAGTG
GGGAATCGTTCGCCTGGTGCTACCAGTGCGGTAAGTGCGTCCCGGTCTGCCCGGTCGACGTGGTCGGTGATTATGGGCCA
CGCAAGCTGTACCGGCGGGCACAGACCGGGATCAACCTCCTCGATTCGCCCGACCTCTGGCTCTGCACCACGTGTGCCAA
CTGTCTCCGAGTCTGCCCCAAGCAGGTCGATATGATCCAGATCATGCCCGCGGCCCGCGAGCACGCCATGCTGAGTGGGC
GCGTCATCCCCAGCGAACTCCAGGAGGCGCTCGAGAACACTGCCAAATACGGAAACCCGCTCGGGCAACCGGCCCGCAAG
CGCGAAGCCTGGGTCAAGGACGCCGGCGTACCCGTGCCGATCTTGCACCAGATCCAGCGTCCGGTCGAGTGGCTGTGGTG
GGTCGAGTGCTACCCCTCCTACCATCCGCGCGGGATCGACGCCTCGATCGCGTTGGCCCGCATCTTCCACGCGCTCGGTC
TCGATTTCGCCATCTTGGGTCGCGAGGAGAAGTGTGCCGGCGACTCGCAGCGACTGGCTGGTGAGCGCGGGCTGTTCGAG
ATGCTGGCCGAGGAGAACATCCGTACCCTCTCCAAGTACGAGTTTCAGCACATCGTCGTGACCGATCCGCATGCCCTCAA
TGCCTTCCGCAAGCACTATCCGAAGCTCGGCGGACAATACGACGTTTGGCACTACACGACGCTCCTCGCCCGCGAGCTCT
CGCGCCTGCAGCCGCTCCTCGTTCGCCCGCTGCCCTACCGCGTCACCTTCCACGATCCCTGCTACCTCGGCCGTCACAAC
GGCGAATACGACGCACCACGGCAGCTGATCCAGGCGATTCCCGGCATCGAGTTCGTCGAGATGCTGCGTTGTCGCGAGAA
CTCCTACTGCTGCGGCGGCGGTGGAGGTGGCATGTGGCTGGACAGCTTCGCGGCTGGCCATCAGCGCCGGCGCCTTTCTG
AGGAGCGCGTGCTCGAAGCGGTCAGCACCGGTGCCGACACCTTAGTCGTGTGCTGCCCGTACGAAGTCTCCCGCTTCGAG
GATGCCGTGAAGTCGACCGGAAACGAGGGACGCTTGCGTGTCCGCGATATCGCTGAGCTTCTGGCCGAGGCGATGGGGAT
GATCGGGGAGGCAACAGCATGA

Upstream 100 bases:

>100_bases
TCGGGAGTTCAATCGGCTCCTGCCGCCTCTCCCACAACTCGCGCGGCGCTTGCTGGGTCTCGGCCGAGCACGCGCTGTCC
GCTCGTGAAAGGAGCTGACG

Downstream 100 bases:

>100_bases
CGATCGCGGTGATCCTGGAGCAAGTGCCGGATGTAGTGGAGGAACTCGCTATCGCCCCCTCGGGGAACGAACTCGACCGC
GACACCGTAACCTACGTGTT

Product: iron-sulfur cluster-binding protein

Products: FADH2; dihydroxy-acetone-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDPSLEKVQEVWERETAIVEGVDISGPWNRMFGQRVIWDYTPELIEEIARLPSGESFAWCYQCGKCVPVCPVDVVGDYGP
RKLYRRAQTGINLLDSPDLWLCTTCANCLRVCPKQVDMIQIMPAAREHAMLSGRVIPSELQEALENTAKYGNPLGQPARK
REAWVKDAGVPVPILHQIQRPVEWLWWVECYPSYHPRGIDASIALARIFHALGLDFAILGREEKCAGDSQRLAGERGLFE
MLAEENIRTLSKYEFQHIVVTDPHALNAFRKHYPKLGGQYDVWHYTTLLARELSRLQPLLVRPLPYRVTFHDPCYLGRHN
GEYDAPRQLIQAIPGIEFVEMLRCRENSYCCGGGGGGMWLDSFAAGHQRRRLSEERVLEAVSTGADTLVVCCPYEVSRFE
DAVKSTGNEGRLRVRDIAELLAEAMGMIGEATA

Sequences:

>Translated_433_residues
MDPSLEKVQEVWERETAIVEGVDISGPWNRMFGQRVIWDYTPELIEEIARLPSGESFAWCYQCGKCVPVCPVDVVGDYGP
RKLYRRAQTGINLLDSPDLWLCTTCANCLRVCPKQVDMIQIMPAAREHAMLSGRVIPSELQEALENTAKYGNPLGQPARK
REAWVKDAGVPVPILHQIQRPVEWLWWVECYPSYHPRGIDASIALARIFHALGLDFAILGREEKCAGDSQRLAGERGLFE
MLAEENIRTLSKYEFQHIVVTDPHALNAFRKHYPKLGGQYDVWHYTTLLARELSRLQPLLVRPLPYRVTFHDPCYLGRHN
GEYDAPRQLIQAIPGIEFVEMLRCRENSYCCGGGGGGMWLDSFAAGHQRRRLSEERVLEAVSTGADTLVVCCPYEVSRFE
DAVKSTGNEGRLRVRDIAELLAEAMGMIGEATA
>Mature_433_residues
MDPSLEKVQEVWERETAIVEGVDISGPWNRMFGQRVIWDYTPELIEEIARLPSGESFAWCYQCGKCVPVCPVDVVGDYGP
RKLYRRAQTGINLLDSPDLWLCTTCANCLRVCPKQVDMIQIMPAAREHAMLSGRVIPSELQEALENTAKYGNPLGQPARK
REAWVKDAGVPVPILHQIQRPVEWLWWVECYPSYHPRGIDASIALARIFHALGLDFAILGREEKCAGDSQRLAGERGLFE
MLAEENIRTLSKYEFQHIVVTDPHALNAFRKHYPKLGGQYDVWHYTTLLARELSRLQPLLVRPLPYRVTFHDPCYLGRHN
GEYDAPRQLIQAIPGIEFVEMLRCRENSYCCGGGGGGMWLDSFAAGHQRRRLSEERVLEAVSTGADTLVVCCPYEVSRFE
DAVKSTGNEGRLRVRDIAELLAEAMGMIGEATA

Specific function: Electron Transfer Protein; May Also Function As The Membrane Anchor For The Glpab Dimer. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48904; Mature: 48904

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSLEKVQEVWERETAIVEGVDISGPWNRMFGQRVIWDYTPELIEEIARLPSGESFAWC
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCHHH
YQCGKCVPVCPVDVVGDYGPRKLYRRAQTGINLLDSPDLWLCTTCANCLRVCPKQVDMIQ
HHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHH
IMPAAREHAMLSGRVIPSELQEALENTAKYGNPLGQPARKREAWVKDAGVPVPILHQIQR
HCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
PVEWLWWVECYPSYHPRGIDASIALARIFHALGLDFAILGREEKCAGDSQRLAGERGLFE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHCCCCHHHHHHHHHHHH
MLAEENIRTLSKYEFQHIVVTDPHALNAFRKHYPKLGGQYDVWHYTTLLARELSRLQPLL
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
VRPLPYRVTFHDPCYLGRHNGEYDAPRQLIQAIPGIEFVEMLRCRENSYCCGGGGGGMWL
CCCCCEEEEECCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCHHH
DSFAAGHQRRRLSEERVLEAVSTGADTLVVCCPYEVSRFEDAVKSTGNEGRLRVRDIAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHHHH
LAEAMGMIGEATA
HHHHHHHHCCCCC
>Mature Secondary Structure
MDPSLEKVQEVWERETAIVEGVDISGPWNRMFGQRVIWDYTPELIEEIARLPSGESFAWC
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCHHH
YQCGKCVPVCPVDVVGDYGPRKLYRRAQTGINLLDSPDLWLCTTCANCLRVCPKQVDMIQ
HHCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCHHH
IMPAAREHAMLSGRVIPSELQEALENTAKYGNPLGQPARKREAWVKDAGVPVPILHQIQR
HCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
PVEWLWWVECYPSYHPRGIDASIALARIFHALGLDFAILGREEKCAGDSQRLAGERGLFE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHCCCCHHHHHHHHHHHH
MLAEENIRTLSKYEFQHIVVTDPHALNAFRKHYPKLGGQYDVWHYTTLLARELSRLQPLL
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHH
VRPLPYRVTFHDPCYLGRHNGEYDAPRQLIQAIPGIEFVEMLRCRENSYCCGGGGGGMWL
CCCCCEEEEECCCCEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCHHH
DSFAAGHQRRRLSEERVLEAVSTGADTLVVCCPYEVSRFEDAVKSTGNEGRLRVRDIAEL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEHHHHHHH
LAEAMGMIGEATA
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: FAD; glycerol-3-phosphate [C]

Specific reaction: FAD + glycerol-3-phosphate = FADH2 + dihydroxy-acetone-phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]