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The map label for this gene is etfB [H]

Identifier: 221632183

GI number: 221632183

Start: 158932

End: 159699

Strand: Reverse

Name: etfB [H]

Synonym: trd_0149

Alternate gene names: 221632183

Gene position: 159699-158932 (Counterclockwise)

Preceding gene: 221632184

Following gene: 221632182

Centisome position: 7.97

GC content: 64.71

Gene sequence:

>768_bases
ATGACGATCGCGGTGATCCTGGAGCAAGTGCCGGATGTAGTGGAGGAACTCGCTATCGCCCCCTCGGGGAACGAACTCGA
CCGCGACACCGTAACCTACGTGTTGAACGAGTACGACGACCACGCACTGGAAGAGGCGTTGCTGCTGGCCGAAGCCAGCG
GCGACGAGGTGATCGCCGTCGGTATCGATACCACTGGGGAACTCGATCAAGCCCTGTACACGGCGCTCGCCAAGGGGGCC
AAGCGCGCGATCAAGCTGGTCGGTGATTTCGAAGAGACCTGGCTGAGTACCCGTGCGACAGCCGAGATCCTGGCACCGAT
CCTACGCGATCTGGCGCCGCGCCTCGTGCTGACCGGTGTGCAGGCACCGGACGATCTGGATGGGCAACTCGCACCGACAC
TCGCCGCACGGCTCGGCTGGCCACACGCCAGCGTGGTGATCGGCACTGAGTTCAGTGATGGCCGTCTCAGGGCTCGTAAG
GAACTCTGGGGCGGAATGACCCTGCTGCTCGAACTGGAACCCCCCGCCATCCTCGGTATTCAAGCGGCTCGCCAGGCGCC
ACGCTACGTCCCGGTCAGCCGCGTCCGGCAGGTGATGCGCGAGGCGACGATCGAGGAGATCGAAGTCGAACTCCCCACCC
AACCGAGTGTCGCGGTCGAGCGCCTGCGTCTACCTGAGGAAGCCAGCCAAGCTGAGCTCCTGACCGGAAGCGCAGCGGAG
ATCGCCGAGCGAATGATCGAGCTGTTGCGCGCCCGCGGACTGCTGTGA

Upstream 100 bases:

>100_bases
AGGATGCCGTGAAGTCGACCGGAAACGAGGGACGCTTGCGTGTCCGCGATATCGCTGAGCTTCTGGCCGAGGCGATGGGG
ATGATCGGGGAGGCAACAGC

Downstream 100 bases:

>100_bases
GCGAGGAGGAGGACGATGGCCCAGCGGATCGCCGTGCTCGTCGAACACCTCGACGGTGAACCGACCGATGTGACCTACGA
ACTGCTCGGCGTCGCGCGCC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MTIAVILEQVPDVVEELAIAPSGNELDRDTVTYVLNEYDDHALEEALLLAEASGDEVIAVGIDTTGELDQALYTALAKGA
KRAIKLVGDFEETWLSTRATAEILAPILRDLAPRLVLTGVQAPDDLDGQLAPTLAARLGWPHASVVIGTEFSDGRLRARK
ELWGGMTLLLELEPPAILGIQAARQAPRYVPVSRVRQVMREATIEEIEVELPTQPSVAVERLRLPEEASQAELLTGSAAE
IAERMIELLRARGLL

Sequences:

>Translated_255_residues
MTIAVILEQVPDVVEELAIAPSGNELDRDTVTYVLNEYDDHALEEALLLAEASGDEVIAVGIDTTGELDQALYTALAKGA
KRAIKLVGDFEETWLSTRATAEILAPILRDLAPRLVLTGVQAPDDLDGQLAPTLAARLGWPHASVVIGTEFSDGRLRARK
ELWGGMTLLLELEPPAILGIQAARQAPRYVPVSRVRQVMREATIEEIEVELPTQPSVAVERLRLPEEASQAELLTGSAAE
IAERMIELLRARGLL
>Mature_254_residues
TIAVILEQVPDVVEELAIAPSGNELDRDTVTYVLNEYDDHALEEALLLAEASGDEVIAVGIDTTGELDQALYTALAKGAK
RAIKLVGDFEETWLSTRATAEILAPILRDLAPRLVLTGVQAPDDLDGQLAPTLAARLGWPHASVVIGTEFSDGRLRARKE
LWGGMTLLLELEPPAILGIQAARQAPRYVPVSRVRQVMREATIEEIEVELPTQPSVAVERLRLPEEASQAELLTGSAAEI
AERMIELLRARGLL

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25141345, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6321646, Length=248, Percent_Identity=25.8064516129032, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24651147, Length=185, Percent_Identity=30.2702702702703, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24651145, Length=185, Percent_Identity=30.2702702702703, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27682; Mature: 27551

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAVILEQVPDVVEELAIAPSGNELDRDTVTYVLNEYDDHALEEALLLAEASGDEVIAV
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
GIDTTGELDQALYTALAKGAKRAIKLVGDFEETWLSTRATAEILAPILRDLAPRLVLTGV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
QAPDDLDGQLAPTLAARLGWPHASVVIGTEFSDGRLRARKELWGGMTLLLELEPPAILGI
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCEECH
QAARQAPRYVPVSRVRQVMREATIEEIEVELPTQPSVAVERLRLPEEASQAELLTGSAAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHCCCHHH
IAERMIELLRARGLL
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIAVILEQVPDVVEELAIAPSGNELDRDTVTYVLNEYDDHALEEALLLAEASGDEVIAV
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
GIDTTGELDQALYTALAKGAKRAIKLVGDFEETWLSTRATAEILAPILRDLAPRLVLTGV
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
QAPDDLDGQLAPTLAARLGWPHASVVIGTEFSDGRLRARKELWGGMTLLLELEPPAILGI
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCEECH
QAARQAPRYVPVSRVRQVMREATIEEIEVELPTQPSVAVERLRLPEEASQAELLTGSAAE
HHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHCCCHHH
IAERMIELLRARGLL
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]