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The map label for this gene is fadF [H]

Identifier: 221632181

GI number: 221632181

Start: 155910

End: 157946

Strand: Reverse

Name: fadF [H]

Synonym: trd_0147

Alternate gene names: 221632181

Gene position: 157946-155910 (Counterclockwise)

Preceding gene: 221632182

Following gene: 221632180

Centisome position: 7.89

GC content: 63.48

Gene sequence:

>2037_bases
GTGCTCAGCACACCGGAACGGATCGCGTTCCTTCTCCTGGCTCTCGTCTCGCTCCTGCTCACCGCGCACGGTGTCTCACG
CCTCGTGCGGGCCATCGGACGCGGACAGGGTCGGCCACGCTGGTCGCTCTTCGTGCGGCGCGTCGTCCCGGTCAGTCTCG
ACATCCTGCTGCAACGGCCGATCTTCCGAGCGCGTCCGTGGGTGAGCTTGCTGCATGCCGGGATTTTCTTCGCTTTCGTC
TTCTACGGCCTGGTCAATATCCTCGATATCCTCGAGGGATTCACCGGCTTCACGACCCTGCATCGGGGCGGCATCGCCGG
AGCCTACAATCTCGTCGCCGATCTCTTGAGCGTGGCAGCGCTCGTCGGCATGATCGGGCTCTTGTTCCGCCGCTTCGGCC
TGCGACCTTTCCGCTTCAACGAGCGTGTCCTGCTCCTCCCGAGCGTTCGGTTCGGGATCGCGCGCGATTCGGCAATCGTG
GGTGGATTCATCCTCTTGCACGTGGGCTCACGCTGGGTCGGGCAAGCTGTGCGCATCGCCGAAAGCAGGCACTCTGACTG
GAGCCAGCCGACCGCCAGTCTGGTCGCTCGACTCTTCACCGGGTGGGAAGTCGAGACGCTCGCCCTGGCCAGCCACGTGA
CCTGGTGGCTCGCACTCGGACTGATCTTGGCTTTTCTGCCCTATTTCCCCTACTCGAAGCACATCCACCTGTTCATGGCT
CCGCTCAACCTGATCTTGCGCGAGGAGCGTCCTCTGGGGCAGCTCGAGCCACCGGTCGCCCGCGACGGCCAGCTGGGCAG
CGAACGGCTGGAACAGTTGCGCTGGTTCCAAATCCTCGATGCTTACGCCTGCATCATGTGCAACCGCTGCCAGGACGTCT
GCCCGGCACATGGCACCGGGCGCGCACTCAGTCCCGCCGCACTGGAAATCAACAAGCGCTATTATCTGAACCGGAATTTG
CGTGCCTTCGCTGATGGGACGAGTTCGCCGCCCTTACTCGAGATCGCTACCTCCAAGGAAGCGGTCTGGGCTTGTACGAC
CTGCGCAGCGTGTGTCCGGATCTGTCCGGTCGGCAACCGCCCGATGCTCGATCTCATCGATATCCGGCGTGCCCTCGTCA
ACCAGGGAGATCCGCTCGATCCCAACCTGCAAGCAGCACTGGAGAGTCTCGGACGCTATGGCAACTCGTTCGGGAAACCA
GCACGCCAACGCGCTCGCTGGGCCAAAGAACTTCCCTTCACCATCAAGGACGCGCGCAAGGAGCCGGTCGAATACCTGTG
GTTCGTCGGTGATTTCGCTTCCTTCGATCCGCGGATGCAGGAGAACACCAAGACAGTGGCGTGGCTCTTCCACACGGCCG
GCCTGGACTTCGGCCTCCTGTACGAGGACGAGCGCAATGCCGGGAACGACGTGCGTCGCGTCGGCGAAGAAGGGCTGTTC
GAGCTGCTCGTCGAGCAGAATTTGCGCGCGTTCGAGAAAGCGCAGTTCCGAGCGATCGTCACCACGGACCCGCACAGCTA
CAACGCGCTCAAGAACGAGTACGCCGCCTTCGGTTTCTCCGTACCGGTCTATCACTACACGGAAGTCCTCGCACAGCTCC
TGGAAGATGGGCGATTGACCGTCCGGCAGCCACTCGCGGCGGCAGTCACGTACCACGACCCCTGTTATCTCGGCCGCTAC
AACCGGATCACAGCAGCACCCCGCCGGATCTTGCGGGCACTCGGGGCAGAACTCCGCGAGATGCCGCGACACGGGGAAAA
CACGTACTGCTGTGGCGCTGGTGGTGGTCAGATCTGGATGGCCAGCGACGGCGAGGAGCGACCGAGCGAGCAGCGGATCC
GCGAAGCAGTGCAGCTCGGTGAGGATCTCCGCTACTTCGTCGTCGCCTGCCCGAAGGACATGGCTATGTACAGTGACGCC
GTCAAGACGACGGGCTACGAAGGGCGGCTGGTCGTCACCGACATCGCCCGGCTCGTGGCCAGCGCGGTTGGCTTCGAGGA
AGCACCGGTGTTCGCCGCTACGGAGGAACGCTCGTGA

Upstream 100 bases:

>100_bases
GATCCCAAGGCGCCGATTTTCACCGTCGCCGACTATGGAGCAGTCGCCGACCTCTTCGAGGTCGCCGAGGCGCTGCTGGA
GCGACTGGAGGGTTGATCCC

Downstream 100 bases:

>100_bases
GTGCAGGGTGCCCTGACCAGCTGGCCAGTGCATTCGCACAGCGCTTTCGTGTCCTGGCGCGGGCGCTGGATCGGCTCGAC
CGGCTGGAAGGGGAGCGTGC

Product: heterodisulfide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MLSTPERIAFLLLALVSLLLTAHGVSRLVRAIGRGQGRPRWSLFVRRVVPVSLDILLQRPIFRARPWVSLLHAGIFFAFV
FYGLVNILDILEGFTGFTTLHRGGIAGAYNLVADLLSVAALVGMIGLLFRRFGLRPFRFNERVLLLPSVRFGIARDSAIV
GGFILLHVGSRWVGQAVRIAESRHSDWSQPTASLVARLFTGWEVETLALASHVTWWLALGLILAFLPYFPYSKHIHLFMA
PLNLILREERPLGQLEPPVARDGQLGSERLEQLRWFQILDAYACIMCNRCQDVCPAHGTGRALSPAALEINKRYYLNRNL
RAFADGTSSPPLLEIATSKEAVWACTTCAACVRICPVGNRPMLDLIDIRRALVNQGDPLDPNLQAALESLGRYGNSFGKP
ARQRARWAKELPFTIKDARKEPVEYLWFVGDFASFDPRMQENTKTVAWLFHTAGLDFGLLYEDERNAGNDVRRVGEEGLF
ELLVEQNLRAFEKAQFRAIVTTDPHSYNALKNEYAAFGFSVPVYHYTEVLAQLLEDGRLTVRQPLAAAVTYHDPCYLGRY
NRITAAPRRILRALGAELREMPRHGENTYCCGAGGGQIWMASDGEERPSEQRIREAVQLGEDLRYFVVACPKDMAMYSDA
VKTTGYEGRLVVTDIARLVASAVGFEEAPVFAATEERS

Sequences:

>Translated_678_residues
MLSTPERIAFLLLALVSLLLTAHGVSRLVRAIGRGQGRPRWSLFVRRVVPVSLDILLQRPIFRARPWVSLLHAGIFFAFV
FYGLVNILDILEGFTGFTTLHRGGIAGAYNLVADLLSVAALVGMIGLLFRRFGLRPFRFNERVLLLPSVRFGIARDSAIV
GGFILLHVGSRWVGQAVRIAESRHSDWSQPTASLVARLFTGWEVETLALASHVTWWLALGLILAFLPYFPYSKHIHLFMA
PLNLILREERPLGQLEPPVARDGQLGSERLEQLRWFQILDAYACIMCNRCQDVCPAHGTGRALSPAALEINKRYYLNRNL
RAFADGTSSPPLLEIATSKEAVWACTTCAACVRICPVGNRPMLDLIDIRRALVNQGDPLDPNLQAALESLGRYGNSFGKP
ARQRARWAKELPFTIKDARKEPVEYLWFVGDFASFDPRMQENTKTVAWLFHTAGLDFGLLYEDERNAGNDVRRVGEEGLF
ELLVEQNLRAFEKAQFRAIVTTDPHSYNALKNEYAAFGFSVPVYHYTEVLAQLLEDGRLTVRQPLAAAVTYHDPCYLGRY
NRITAAPRRILRALGAELREMPRHGENTYCCGAGGGQIWMASDGEERPSEQRIREAVQLGEDLRYFVVACPKDMAMYSDA
VKTTGYEGRLVVTDIARLVASAVGFEEAPVFAATEERS
>Mature_678_residues
MLSTPERIAFLLLALVSLLLTAHGVSRLVRAIGRGQGRPRWSLFVRRVVPVSLDILLQRPIFRARPWVSLLHAGIFFAFV
FYGLVNILDILEGFTGFTTLHRGGIAGAYNLVADLLSVAALVGMIGLLFRRFGLRPFRFNERVLLLPSVRFGIARDSAIV
GGFILLHVGSRWVGQAVRIAESRHSDWSQPTASLVARLFTGWEVETLALASHVTWWLALGLILAFLPYFPYSKHIHLFMA
PLNLILREERPLGQLEPPVARDGQLGSERLEQLRWFQILDAYACIMCNRCQDVCPAHGTGRALSPAALEINKRYYLNRNL
RAFADGTSSPPLLEIATSKEAVWACTTCAACVRICPVGNRPMLDLIDIRRALVNQGDPLDPNLQAALESLGRYGNSFGKP
ARQRARWAKELPFTIKDARKEPVEYLWFVGDFASFDPRMQENTKTVAWLFHTAGLDFGLLYEDERNAGNDVRRVGEEGLF
ELLVEQNLRAFEKAQFRAIVTTDPHSYNALKNEYAAFGFSVPVYHYTEVLAQLLEDGRLTVRQPLAAAVTYHDPCYLGRY
NRITAAPRRILRALGAELREMPRHGENTYCCGAGGGQIWMASDGEERPSEQRIREAVQLGEDLRYFVVACPKDMAMYSDA
VKTTGYEGRLVVTDIARLVASAVGFEEAPVFAATEERS

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 75898; Mature: 75898

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTPERIAFLLLALVSLLLTAHGVSRLVRAIGRGQGRPRWSLFVRRVVPVSLDILLQRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
IFRARPWVSLLHAGIFFAFVFYGLVNILDILEGFTGFTTLHRGGIAGAYNLVADLLSVAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVGMIGLLFRRFGLRPFRFNERVLLLPSVRFGIARDSAIVGGFILLHVGSRWVGQAVRIA
HHHHHHHHHHHHCCCCEEECCEEEEECCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
ESRHSDWSQPTASLVARLFTGWEVETLALASHVTWWLALGLILAFLPYFPYSKHIHLFMA
HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHH
PLNLILREERPLGQLEPPVARDGQLGSERLEQLRWFQILDAYACIMCNRCQDVCPAHGTG
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RALSPAALEINKRYYLNRNLRAFADGTSSPPLLEIATSKEAVWACTTCAACVRICPVGNR
CCCCCHHHEECCCEEECCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
PMLDLIDIRRALVNQGDPLDPNLQAALESLGRYGNSFGKPARQRARWAKELPFTIKDARK
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCC
EPVEYLWFVGDFASFDPRMQENTKTVAWLFHTAGLDFGLLYEDERNAGNDVRRVGEEGLF
CCHHHHHEECCHHCCCCCHHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHH
ELLVEQNLRAFEKAQFRAIVTTDPHSYNALKNEYAAFGFSVPVYHYTEVLAQLLEDGRLT
HHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
VRQPLAAAVTYHDPCYLGRYNRITAAPRRILRALGAELREMPRHGENTYCCGAGGGQIWM
HHCCHHHHHEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
ASDGEERPSEQRIREAVQLGEDLRYFVVACPKDMAMYSDAVKTTGYEGRLVVTDIARLVA
ECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
SAVGFEEAPVFAATEERS
HHHCCCCCCEEECCCCCC
>Mature Secondary Structure
MLSTPERIAFLLLALVSLLLTAHGVSRLVRAIGRGQGRPRWSLFVRRVVPVSLDILLQRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
IFRARPWVSLLHAGIFFAFVFYGLVNILDILEGFTGFTTLHRGGIAGAYNLVADLLSVAA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVGMIGLLFRRFGLRPFRFNERVLLLPSVRFGIARDSAIVGGFILLHVGSRWVGQAVRIA
HHHHHHHHHHHHCCCCEEECCEEEEECCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
ESRHSDWSQPTASLVARLFTGWEVETLALASHVTWWLALGLILAFLPYFPYSKHIHLFMA
HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHH
PLNLILREERPLGQLEPPVARDGQLGSERLEQLRWFQILDAYACIMCNRCQDVCPAHGTG
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RALSPAALEINKRYYLNRNLRAFADGTSSPPLLEIATSKEAVWACTTCAACVRICPVGNR
CCCCCHHHEECCCEEECCCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCC
PMLDLIDIRRALVNQGDPLDPNLQAALESLGRYGNSFGKPARQRARWAKELPFTIKDARK
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCC
EPVEYLWFVGDFASFDPRMQENTKTVAWLFHTAGLDFGLLYEDERNAGNDVRRVGEEGLF
CCHHHHHEECCHHCCCCCHHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHH
ELLVEQNLRAFEKAQFRAIVTTDPHSYNALKNEYAAFGFSVPVYHYTEVLAQLLEDGRLT
HHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
VRQPLAAAVTYHDPCYLGRYNRITAAPRRILRALGAELREMPRHGENTYCCGAGGGQIWM
HHCCHHHHHEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
ASDGEERPSEQRIREAVQLGEDLRYFVVACPKDMAMYSDAVKTTGYEGRLVVTDIARLVA
ECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
SAVGFEEAPVFAATEERS
HHHCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]