| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is yggV [C]
Identifier: 221232615
GI number: 221232615
Start: 1836989
End: 1837960
Strand: Reverse
Name: yggV [C]
Synonym: SPN23F_18930
Alternate gene names: 221232615
Gene position: 1837960-1836989 (Counterclockwise)
Preceding gene: 221232616
Following gene: 221232614
Centisome position: 82.74
GC content: 42.39
Gene sequence:
>972_bases ATGACAAATAAAATTTATGAATATAAGGATGACCAGGACTGGTATGTTGGGTCTTATAGTATTTTTGGTGGCGTTAACAG TTTGAGCGACTATAAGACAGATTTTCCTCTGTTTGAATTCTCCAAAATATTTGGAGATGAAGAGTATGGTTTCCCGCTTT CAGTTACTGTTTTACGCTATGGTTCTACCTACCGTTTGTTCTCCTTTGTGGTAGATATGCTTAATCAAGAAATGGGACGA AACTTGGAAGTTATTCAACGTCATGGGGCCCTGCTCTTGGTTGAAAATGGGCAACTCTTGTATGTAGAATTGCCTAAAGA AGGGGTCAATGTTCATGATTTCTTTGAGACAAGCAAGGTCAGAGAAACCTTGTTGATTGCGACTCGTAACGAAGGCAAAA CCAAGGAATTCCGAGCTATCTTTGATAAGTTAGGCTACGATGTGGAAAATCTTAATGACTACCCTGACCTGCCTGAAGTA GCAGAAACAGGTATGACCTTTGAAGAAAATGCCCGCCTTAAGGCAGAAACCATTTCTCAATTAACGGGTAAGATGGTTTT GGCAGATGATTCTGGTCTCAAAGTCGATGTCCTTGGTGGCTTACCAGGCGTCTGGTCAGCTCGTTTCGCAGGTGTGGGAG CAACTGACCGTGAAAATAATGCCAAACTCTTGCACGAATTGGCCATGGTCTTTGAACTCAAGGACCGCTCGGCTCAGTTC CACACAACCCTAGTCGTAGCCAGCCCAAATAAGGAAAGTTTAGTTGTTGAAGCAGACTGGTCAGGTTATATTAACTTTGA ACCTAAGGGTGAAAATGGCTTTGGCTATGATCCCCTCTTCCTTGTAGGAGAGACAGGTGAGTCATCAGCTGAATTAACCC TAGAAGAAAAAAATAGTCAATCTCACCGTGCCTTAGCCGTTAAGAAACTTTTGGAGGTATTTCCATCATGGCAAAGCAAA CCATCATTGTAA
Upstream 100 bases:
>100_bases CACTCCATCACCGTTTTTACACAACAGCCAGTAGCCAAAGTTTTGCACAAATTGGTGAAGAATGGCTGGAAAAAGAGATT CATGTGGAGCATGTAGAATT
Downstream 100 bases:
>100_bases TGAGCGATTCCCATGGCGATAGCTTGATTGTGGAAGAAGTCCGTGATCGCTATGTGGGCAAAGTCGATGCCGTTTTTCAT AACGGCGATTCTGAACTACG
Product: deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein
Products: NA
Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTNKIYEYKDDQDWYVGSYSIFGGVNSLSDYKTDFPLFEFSKIFGDEEYGFPLSVTVLRYGSTYRLFSFVVDMLNQEMGR NLEVIQRHGALLLVENGQLLYVELPKEGVNVHDFFETSKVRETLLIATRNEGKTKEFRAIFDKLGYDVENLNDYPDLPEV AETGMTFEENARLKAETISQLTGKMVLADDSGLKVDVLGGLPGVWSARFAGVGATDRENNAKLLHELAMVFELKDRSAQF HTTLVVASPNKESLVVEADWSGYINFEPKGENGFGYDPLFLVGETGESSAELTLEEKNSQSHRALAVKKLLEVFPSWQSK PSL
Sequences:
>Translated_323_residues MTNKIYEYKDDQDWYVGSYSIFGGVNSLSDYKTDFPLFEFSKIFGDEEYGFPLSVTVLRYGSTYRLFSFVVDMLNQEMGR NLEVIQRHGALLLVENGQLLYVELPKEGVNVHDFFETSKVRETLLIATRNEGKTKEFRAIFDKLGYDVENLNDYPDLPEV AETGMTFEENARLKAETISQLTGKMVLADDSGLKVDVLGGLPGVWSARFAGVGATDRENNAKLLHELAMVFELKDRSAQF HTTLVVASPNKESLVVEADWSGYINFEPKGENGFGYDPLFLVGETGESSAELTLEEKNSQSHRALAVKKLLEVFPSWQSK PSL >Mature_322_residues TNKIYEYKDDQDWYVGSYSIFGGVNSLSDYKTDFPLFEFSKIFGDEEYGFPLSVTVLRYGSTYRLFSFVVDMLNQEMGRN LEVIQRHGALLLVENGQLLYVELPKEGVNVHDFFETSKVRETLLIATRNEGKTKEFRAIFDKLGYDVENLNDYPDLPEVA ETGMTFEENARLKAETISQLTGKMVLADDSGLKVDVLGGLPGVWSARFAGVGATDRENNAKLLHELAMVFELKDRSAQFH TTLVVASPNKESLVVEADWSGYINFEPKGENGFGYDPLFLVGETGESSAELTLEEKNSQSHRALAVKKLLEVFPSWQSKP SL
Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]
COG id: COG0127
COG function: function code F; Xanthosine triphosphate pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAM1 NTPase family [H]
Homologues:
Organism=Escherichia coli, GI1789324, Length=195, Percent_Identity=43.0769230769231, Blast_Score=150, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002637 - InterPro: IPR020922 [H]
Pfam domain/function: PF01725 Ham1p_like [H]
EC number: =3.6.1.15 [H]
Molecular weight: Translated: 36342; Mature: 36211
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKIYEYKDDQDWYVGSYSIFGGVNSLSDYKTDFPLFEFSKIFGDEEYGFPLSVTVLRY CCCCCEEECCCCCEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC GSTYRLFSFVVDMLNQEMGRNLEVIQRHGALLLVENGQLLYVELPKEGVNVHDFFETSKV CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHH RETLLIATRNEGKTKEFRAIFDKLGYDVENLNDYPDLPEVAETGMTFEENARLKAETISQ CEEEEEEECCCCCHHHHHHHHHHHCCCHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH LTGKMVLADDSGLKVDVLGGLPGVWSARFAGVGATDRENNAKLLHELAMVFELKDRSAQF HHCCEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE HTTLVVASPNKESLVVEADWSGYINFEPKGENGFGYDPLFLVGETGESSAELTLEEKNSQ EEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCC SHRALAVKKLLEVFPSWQSKPSL HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNKIYEYKDDQDWYVGSYSIFGGVNSLSDYKTDFPLFEFSKIFGDEEYGFPLSVTVLRY CCCCEEECCCCCEEEEEEEECCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEEEC GSTYRLFSFVVDMLNQEMGRNLEVIQRHGALLLVENGQLLYVELPKEGVNVHDFFETSKV CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHH RETLLIATRNEGKTKEFRAIFDKLGYDVENLNDYPDLPEVAETGMTFEENARLKAETISQ CEEEEEEECCCCCHHHHHHHHHHHCCCHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH LTGKMVLADDSGLKVDVLGGLPGVWSARFAGVGATDRENNAKLLHELAMVFELKDRSAQF HHCCEEEECCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE HTTLVVASPNKESLVVEADWSGYINFEPKGENGFGYDPLFLVGETGESSAELTLEEKNSQ EEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCC SHRALAVKKLLEVFPSWQSKPSL HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA