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The map label for this gene is ywbA [H]

Identifier: 221232545

GI number: 221232545

Start: 1768252

End: 1769607

Strand: Reverse

Name: ywbA [H]

Synonym: SPN23F_18210

Alternate gene names: 221232545

Gene position: 1769607-1768252 (Counterclockwise)

Preceding gene: 221232546

Following gene: 221232544

Centisome position: 79.66

GC content: 36.43

Gene sequence:

>1356_bases
ATGAATACAATGTTGGATAAAATGCAAGAAAAACTTTCTCCAATTGCAATGAAAGTTGGGAATCAGAAGTTTTTAGTTGC
TTTACGTGATTCATTTGTGGGGACTATGCCTGTTATTATGACAGGTTCCATTGCTTTGTTATTAAATGCTTTTCTAGTGG
ATTTACCACAACAATTTCACCTAGAAAGTATTACGAAAACCTTTCAGTGGCTTGTTGACATCAATAATTTGGTATTCAAG
GGAAGTATACCAATTGTTTCCTTGTTGTTCATCTATTGCTTGGGAGTGAATATCGCTAAGATTTACAAGGTTGATACAGT
TTCTGCTGGTTTGGTATCACTTGCTTCGTTTGTCATTTCGATTGGAAGTACAGTTACAAAGAGTTTCCCTTTGGCAAATG
TAGGAGATGTGAAATTAGATCAGATCTTACAAGGAATTGATAATCTAGCATTTGATGGTAAAAATCTGATGGTAACTATT
GGGAATGTGATTCCAGGAAACCATATTAATGCCAGAGGCTACTTTACAGCCATGATGATTGGATTTTTAGCCTCTATTAT
TTTCTGTAAAGTAATGAAAAAGAACTGGGTAATCAAGTTACCAGATTCAGTTCCCCCTGCGATTGCTAAGCCGTTCACTT
CTATCATTCCAGGATTTATGGCGATGTATATAGTAGCCATCTTGACTTATGTTTTCCATTTACTTAGCAATGACTTATTG
ATTGATTGGGTTTACAAGGTGTTACAAACGCCATTACTAGGTTTGTCTCAAAGTTTCTTTGCAGTTATTCTGATGATCTT
TTTGAATAAGTTATTCTGGTTTTTTGGTCTCCATGGAGGAAATGTATTGGCTCCCATCATGGAAGGGCTATTTGGAGTTG
CTATGTTAGCGAATCTGGATGCTTTCCAAAAAGGTGAACCGATTCCTTATATATGGACAAGTGGGTCTTTTGGGGCGTTT
GTCTGGTTTGGAGGATTAGGATTAGTACTTGCTATTTTAATTTTTTCAAGAAACAGTCATTATCGAAAAGTTGCTAAACT
TGGTCTAGCACCAGTTCTGTTTAATATTGGTGAGCCGGTAAATTATGGTTTACCAGTTGTCTTGAATCCTTTGCTATTTA
TACCATTTGTACTTAGCCCGGTTTTCATGGCAACGGTAGCTTACTGGGCAACAAGCTGGGGTCTTGTTTCACCTGTTACA
CAAAATGTTACTTGGGTAATGCCTCCAATTTTATATGGTTTCTTCTCTACAGCATTTGATTGGCGTGCCATCATCTTATC
AGTTGTTTGTTTGATTATTAGTGTCTTGACTTATTTCCCATTTGTGAAAATGGCAGATAAAACTGAATTGAGTTAA

Upstream 100 bases:

>100_bases
ACACGCGCAAGATCATTTAATGACGAGTCTGACTTTTGTTGACTTGGCGAAAGAAGTGGTAGAAGTATACGAACGATTTG
AAAAAAATTAGGAGTTTAGT

Downstream 100 bases:

>100_bases
TGGTCTTACTTGCGTTTTTTGTGATAAAATAGAAATAGATTACGTGTAAGATGAGTTAGGTGTAGGATTTCTTATCTCCA
CTAAAATTGTTATTAGACAA

Product: sugar phosphotransferase system (PTS), IIC component

Products: pyruvate; diacetylchitobiose-6-phosphate [Cytoplasm]; cellobiose-6-phosphate [Cytoplasm] [C]

Alternate protein names: Putative PTS system EIIC component [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MNTMLDKMQEKLSPIAMKVGNQKFLVALRDSFVGTMPVIMTGSIALLLNAFLVDLPQQFHLESITKTFQWLVDINNLVFK
GSIPIVSLLFIYCLGVNIAKIYKVDTVSAGLVSLASFVISIGSTVTKSFPLANVGDVKLDQILQGIDNLAFDGKNLMVTI
GNVIPGNHINARGYFTAMMIGFLASIIFCKVMKKNWVIKLPDSVPPAIAKPFTSIIPGFMAMYIVAILTYVFHLLSNDLL
IDWVYKVLQTPLLGLSQSFFAVILMIFLNKLFWFFGLHGGNVLAPIMEGLFGVAMLANLDAFQKGEPIPYIWTSGSFGAF
VWFGGLGLVLAILIFSRNSHYRKVAKLGLAPVLFNIGEPVNYGLPVVLNPLLFIPFVLSPVFMATVAYWATSWGLVSPVT
QNVTWVMPPILYGFFSTAFDWRAIILSVVCLIISVLTYFPFVKMADKTELS

Sequences:

>Translated_451_residues
MNTMLDKMQEKLSPIAMKVGNQKFLVALRDSFVGTMPVIMTGSIALLLNAFLVDLPQQFHLESITKTFQWLVDINNLVFK
GSIPIVSLLFIYCLGVNIAKIYKVDTVSAGLVSLASFVISIGSTVTKSFPLANVGDVKLDQILQGIDNLAFDGKNLMVTI
GNVIPGNHINARGYFTAMMIGFLASIIFCKVMKKNWVIKLPDSVPPAIAKPFTSIIPGFMAMYIVAILTYVFHLLSNDLL
IDWVYKVLQTPLLGLSQSFFAVILMIFLNKLFWFFGLHGGNVLAPIMEGLFGVAMLANLDAFQKGEPIPYIWTSGSFGAF
VWFGGLGLVLAILIFSRNSHYRKVAKLGLAPVLFNIGEPVNYGLPVVLNPLLFIPFVLSPVFMATVAYWATSWGLVSPVT
QNVTWVMPPILYGFFSTAFDWRAIILSVVCLIISVLTYFPFVKMADKTELS
>Mature_451_residues
MNTMLDKMQEKLSPIAMKVGNQKFLVALRDSFVGTMPVIMTGSIALLLNAFLVDLPQQFHLESITKTFQWLVDINNLVFK
GSIPIVSLLFIYCLGVNIAKIYKVDTVSAGLVSLASFVISIGSTVTKSFPLANVGDVKLDQILQGIDNLAFDGKNLMVTI
GNVIPGNHINARGYFTAMMIGFLASIIFCKVMKKNWVIKLPDSVPPAIAKPFTSIIPGFMAMYIVAILTYVFHLLSNDLL
IDWVYKVLQTPLLGLSQSFFAVILMIFLNKLFWFFGLHGGNVLAPIMEGLFGVAMLANLDAFQKGEPIPYIWTSGSFGAF
VWFGGLGLVLAILIFSRNSHYRKVAKLGLAPVLFNIGEPVNYGLPVVLNPLLFIPFVLSPVFMATVAYWATSWGLVSPVT
QNVTWVMPPILYGFFSTAFDWRAIILSVVCLIISVLTYFPFVKMADKTELS

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-3 domain [H]

Homologues:

Organism=Escherichia coli, GI1788032, Length=471, Percent_Identity=28.8747346072187, Blast_Score=205, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003352
- InterPro:   IPR004796
- InterPro:   IPR004501 [H]

Pfam domain/function: PF02378 PTS_EIIC [H]

EC number: NA

Molecular weight: Translated: 49772; Mature: 49772

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS51105 PTS_EIIC_TYPE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTMLDKMQEKLSPIAMKVGNQKFLVALRDSFVGTMPVIMTGSIALLLNAFLVDLPQQFH
CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
LESITKTFQWLVDINNLVFKGSIPIVSLLFIYCLGVNIAKIYKVDTVSAGLVSLASFVIS
HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHH
IGSTVTKSFPLANVGDVKLDQILQGIDNLAFDGKNLMVTIGNVIPGNHINARGYFTAMMI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
GFLASIIFCKVMKKNWVIKLPDSVPPAIAKPFTSIIPGFMAMYIVAILTYVFHLLSNDLL
HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IDWVYKVLQTPLLGLSQSFFAVILMIFLNKLFWFFGLHGGNVLAPIMEGLFGVAMLANLD
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
AFQKGEPIPYIWTSGSFGAFVWFGGLGLVLAILIFSRNSHYRKVAKLGLAPVLFNIGEPV
HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
NYGLPVVLNPLLFIPFVLSPVFMATVAYWATSWGLVSPVTQNVTWVMPPILYGFFSTAFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHH
WRAIILSVVCLIISVLTYFPFVKMADKTELS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTMLDKMQEKLSPIAMKVGNQKFLVALRDSFVGTMPVIMTGSIALLLNAFLVDLPQQFH
CCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHH
LESITKTFQWLVDINNLVFKGSIPIVSLLFIYCLGVNIAKIYKVDTVSAGLVSLASFVIS
HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHH
IGSTVTKSFPLANVGDVKLDQILQGIDNLAFDGKNLMVTIGNVIPGNHINARGYFTAMMI
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHH
GFLASIIFCKVMKKNWVIKLPDSVPPAIAKPFTSIIPGFMAMYIVAILTYVFHLLSNDLL
HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IDWVYKVLQTPLLGLSQSFFAVILMIFLNKLFWFFGLHGGNVLAPIMEGLFGVAMLANLD
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCH
AFQKGEPIPYIWTSGSFGAFVWFGGLGLVLAILIFSRNSHYRKVAKLGLAPVLFNIGEPV
HHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
NYGLPVVLNPLLFIPFVLSPVFMATVAYWATSWGLVSPVTQNVTWVMPPILYGFFSTAFD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHH
WRAIILSVVCLIISVLTYFPFVKMADKTELS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: diacetylchitobiose [Periplasm]; phosphoenolpyruvate; cellobiose [Periplasm] [C]

Specific reaction: phosphoenolpyruvate + diacetylchitobiose [Periplasm] = pyruvate + diacetylchitobiose-6-phosphate [Cytoplasm] phosphoenolpyruvate + cellobiose [Periplasm] = cellobiose-6-phosphate [Cytoplasm] + pyruvate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]