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The map label for this gene is ykuT [H]

Identifier: 221232487

GI number: 221232487

Start: 1695067

End: 1695627

Strand: Reverse

Name: ykuT [H]

Synonym: SPN23F_17590

Alternate gene names: 221232487

Gene position: 1695627-1695067 (Counterclockwise)

Preceding gene: 221232491

Following gene: 221232486

Centisome position: 76.33

GC content: 40.11

Gene sequence:

>561_bases
ATGCAAAAATTTATTCAGGCTTATATTGAAAAGCTAGATGTGACAACCATTATCGAGAATATTCTAACCAAGGTCATTTC
TCTTTTACTGCTTTTGATTGTATTTTATATTGCTAAAAAAATGCTTCATACCATGGTGCAGAGAATTGTCAAACCTTCTC
TAAAAATGTCTCGTCATGATGTCGGACGCCAAAAAACCATCTCACGTTTACTAGAAAATGTGTTTAATTATACGCTATAT
TTCTTTTTACTCTACTGCATTTTGTCGATTTTAGGTTTGCCAGTTTCTAGTTTGCTGGCTGGAGCTGGTATTGCTGGGGT
AGCGATTGGTATGGGAGCCCAAGGCTTTCTGTCTGATGTCATCAATGGCTTTTTCATCCTCTTTGAACGTCAACTGGATG
TGGGAGATGAGGTCGTTCTGACAAATGGACCGATTACTGTATCGGGTAAGGTTGTCAGTGTGGGAATTCGTACGACACAG
CTTCGTAGCGAGGAGCAAGCCCTTCACTTTGTCCCTAACCGAAATATCACAGTTGTTAGCAATTTCTCACGCACAGACTA
G

Upstream 100 bases:

>100_bases
TAAATGATAGACAAAATCAAGAATTTTCTGTCTATTTTTTGAATATTTATGGAGAATGAGACTGATGAAAATATGGTATA
ATGAAATAAAGGAGTTTTAT

Downstream 100 bases:

>100_bases
ACCTGTTATTTTAAGTAATTTGTGGTACAATAGAGGGAGTTTAATAAGGAGAAAAGATGGTTTTAGAAAAGCAGTTGGGC
CATGGTTGTACCTGGATAGA

Product: mechanosensitive ion channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MQKFIQAYIEKLDVTTIIENILTKVISLLLLLIVFYIAKKMLHTMVQRIVKPSLKMSRHDVGRQKTISRLLENVFNYTLY
FFLLYCILSILGLPVSSLLAGAGIAGVAIGMGAQGFLSDVINGFFILFERQLDVGDEVVLTNGPITVSGKVVSVGIRTTQ
LRSEEQALHFVPNRNITVVSNFSRTD

Sequences:

>Translated_186_residues
MQKFIQAYIEKLDVTTIIENILTKVISLLLLLIVFYIAKKMLHTMVQRIVKPSLKMSRHDVGRQKTISRLLENVFNYTLY
FFLLYCILSILGLPVSSLLAGAGIAGVAIGMGAQGFLSDVINGFFILFERQLDVGDEVVLTNGPITVSGKVVSVGIRTTQ
LRSEEQALHFVPNRNITVVSNFSRTD
>Mature_186_residues
MQKFIQAYIEKLDVTTIIENILTKVISLLLLLIVFYIAKKMLHTMVQRIVKPSLKMSRHDVGRQKTISRLLENVFNYTLY
FFLLYCILSILGLPVSSLLAGAGIAGVAIGMGAQGFLSDVINGFFILFERQLDVGDEVVLTNGPITVSGKVVSVGIRTTQ
LRSEEQALHFVPNRNITVVSNFSRTD

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 20721; Mature: 20721

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFIQAYIEKLDVTTIIENILTKVISLLLLLIVFYIAKKMLHTMVQRIVKPSLKMSRHD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRQKTISRLLENVFNYTLYFFLLYCILSILGLPVSSLLAGAGIAGVAIGMGAQGFLSDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHH
INGFFILFERQLDVGDEVVLTNGPITVSGKVVSVGIRTTQLRSEEQALHFVPNRNITVVS
HHHHHHHHHHCCCCCCEEEEECCCEEECCEEEEECCHHHHHHCHHHHHHCCCCCCEEEEE
NFSRTD
CCCCCC
>Mature Secondary Structure
MQKFIQAYIEKLDVTTIIENILTKVISLLLLLIVFYIAKKMLHTMVQRIVKPSLKMSRHD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGRQKTISRLLENVFNYTLYFFLLYCILSILGLPVSSLLAGAGIAGVAIGMGAQGFLSDV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCHHHHHHH
INGFFILFERQLDVGDEVVLTNGPITVSGKVVSVGIRTTQLRSEEQALHFVPNRNITVVS
HHHHHHHHHHCCCCCCEEEEECCCEEECCEEEEECCHHHHHHCHHHHHHCCCCCCEEEEE
NFSRTD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]