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The map label for this gene is yfmR [H]

Identifier: 221232266

GI number: 221232266

Start: 1478113

End: 1479984

Strand: Reverse

Name: yfmR [H]

Synonym: SPN23F_15200

Alternate gene names: 221232266

Gene position: 1479984-1478113 (Counterclockwise)

Preceding gene: 221232267

Following gene: 221232264

Centisome position: 66.63

GC content: 43.16

Gene sequence:

>1872_bases
ATGAGTGATTTTATCGTTGAAAAACTAAGTAAATCCGTTGGTGACAAGACCGTTTTTAGGGATATTTCCTTTATTATCCA
TGACTTAGACAGAATTGGTTTAATCGGTGTCAATGGGACTGGCAAGACCACCCTTTTGGACGTCCTTTCTGGTGTTTCTG
GATTTGATGGGGATGTCAGTCCTTTTTCAGCTAAAAATGATTACCAGATTGGTTACTTGACTCAGGATCCTGATTTTGAT
GATAGAAAGACAGTTTTGGATACGGTTCTATCTAGTGAACTCAAGGAAATCCAGCTCATTCGTGAGTATGAATTGATTAT
GCTCGACTATAGTGAGGACAAGCAGGCGCGTTTGGAACGTGTCATGGCAGAGATGGACTCTCTCCAAGCTTGGGAAATTG
AGAGTCAGGTCAAGACCGTTCTTAGCAAATTGGGCATTCAAGACTTATCTACTCCTGTTGGGGAATTGTCAGGTGGTCTG
AGAAGACGGGTACAGTTGGCACAAGTCTTACTTGGCAACCACGACCTTTTGCTTTTGGATGAGCCGACCAACCATCTGGA
TATTGCGATTATTGAGTGGCTGACCCTCTTTTTGAAAAATTCTAAGAAGACCGTCCTTTTTATCACTCACGATCGTTATT
TCTTAGACGCTTTGTCAACACGGATTTTCGAGTTGGAGCGAGCAGGCTTGACAGAATATCAGGGCAATTACCAGGACTAT
GTTCGCCTTAAGGCAGAACAGGACGAGCGCGATGCAGCTCTACTTCATAAAAAAGAACAACTCTACAAACAAGAACTGGC
CTGGATGCGCAGACAACCGCAGGCACGTGCGACCAAGCAACAAGCTCGTATCAATCGTTTCCATGATCTGAAAAAGGAAG
TTTCAGGCAGTAGTGCTGAGACAGACTTGACTATGAACTTTGAAACCAGTCGGATTGGGAAGAAAGTCATCGAGTTTCAG
GATGTTTCCTTTGCCTATGAAAATAAGCCCATTTTGCAAAATTTTAATCTCTTAGTTCAGGCTCAAGACCGTATTGGAAT
TGTTGGGGACAATGGTGTTGGAAAATCAACCCTACTTAACCTGATTGCAGGAAGTCTTGAGCCGACAGCAGGACAAGTTG
TGATTGGGGAAACTGTTCGCATCGCCTATTTCTCTCAACAAATTGAGGGTTTGGATGAAAGCAAGCGTGTGATCAATTAC
CTGCAGGAAGTGGCAGAGGAGGTCAAGACCAGTGGTGGTTCTACGACTTCCATCGCTGAGTTGCTGGAGCAATTCCTCTT
CCCACGTTCGACGCATGGGACTTTGATTGAGAAATTGTCAGGGGGTGAGAAAAAACGTCTTTATCTCCTCAAACTGCTTT
TGGAAAAACCAAATGTTCTTCTTTTAGACGAGCCAACCAATGACCTAGATATTGCAACTTTGACAGTCTTAGAGAATTTC
TTGCAAGGTTTTGCAGGTCCCGTTTTAACAGTCAGTCACGACCGCTATTTCTTGGATAAGGTAGCGACCAAGATTCTCGC
TTTTGAGGATGGCAAGATTCGTCCTTTCTTTGGTCATTACACCGACTATCTTGATGAAAAAGCTTTTGAAACAGATATGG
CCAATCAAGTGCAAAAGGCCGAAAAGGAAAAAGTGGTCAAGGTTCGAGAAGACAAGAAACGCATGACCTACCAAGAAAAG
CAGGAGTGGGCAAGTATTGAAGGTGATATTGAAACCTTGGAAAAACGTATCGCTGCTATTGAAGAGGAAATGCAGGCTAA
CGGCTCTGACTTTGGTAAGCTGGCTACTCTCCAAAAAGAATTGGATGAGAAAAATGAAGCACTCCTTGAAAAATACGAAC
GCTATGAGTATCTCAGTGAATTTGATAGTTAA

Upstream 100 bases:

>100_bases
CAGACTTGGGAGAGATTTTAACAGAGATTGAGTTTGCCATTGTCGATGGAGAATTGGAGAATAATCGTGAAGCCATCCAT
GCTTACCTGAGGGAGAAAAA

Downstream 100 bases:

>100_bases
GACTATTCGAAAATCAAAGTGCAAACTATGTCGGCTTCACATTGCCGACTCAAGTACAGCCTGTGACTGGCTTCCTAATT
TGCACTTTGATTTTTATTGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 622

Protein sequence:

>623_residues
MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFD
DRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGL
RRRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDY
VRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQ
DVSFAYENKPILQNFNLLVQAQDRIGIVGDNGVGKSTLLNLIAGSLEPTAGQVVIGETVRIAYFSQQIEGLDESKRVINY
LQEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENF
LQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEK
QEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS

Sequences:

>Translated_623_residues
MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFD
DRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGL
RRRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDY
VRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQ
DVSFAYENKPILQNFNLLVQAQDRIGIVGDNGVGKSTLLNLIAGSLEPTAGQVVIGETVRIAYFSQQIEGLDESKRVINY
LQEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENF
LQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEK
QEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS
>Mature_622_residues
SDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFDD
RKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLR
RRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDYV
RLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQD
VSFAYENKPILQNFNLLVQAQDRIGIVGDNGVGKSTLLNLIAGSLEPTAGQVVIGETVRIAYFSQQIEGLDESKRVINYL
QEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENFL
QGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEKQ
EWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=537, Percent_Identity=29.4227188081937, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI10947135, Length=550, Percent_Identity=30, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI69354671, Length=550, Percent_Identity=30, Blast_Score=193, Evalue=4e-49,
Organism=Homo sapiens, GI10947137, Length=544, Percent_Identity=29.4117647058824, Blast_Score=183, Evalue=5e-46,
Organism=Homo sapiens, GI27881506, Length=544, Percent_Identity=29.4117647058824, Blast_Score=183, Evalue=5e-46,
Organism=Homo sapiens, GI73747915, Length=226, Percent_Identity=28.3185840707965, Blast_Score=77, Evalue=7e-14,
Organism=Homo sapiens, GI9665248, Length=224, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI73747917, Length=183, Percent_Identity=30.0546448087432, Blast_Score=70, Evalue=7e-12,
Organism=Homo sapiens, GI157502201, Length=267, Percent_Identity=27.3408239700375, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI157502203, Length=268, Percent_Identity=27.9850746268657, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=34.8230912476723, Blast_Score=310, Evalue=2e-85,
Organism=Escherichia coli, GI1787182, Length=625, Percent_Identity=33.76, Blast_Score=304, Evalue=1e-83,
Organism=Escherichia coli, GI1787041, Length=542, Percent_Identity=33.210332103321, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1789751, Length=582, Percent_Identity=31.0996563573883, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1787164, Length=215, Percent_Identity=30.2325581395349, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786698, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=26.2222222222222, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI145693107, Length=566, Percent_Identity=22.6148409893993, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87081709, Length=212, Percent_Identity=25.9433962264151, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081782, Length=189, Percent_Identity=31.2169312169312, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788506, Length=260, Percent_Identity=26.1538461538462, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1789891, Length=237, Percent_Identity=23.2067510548523, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI48994883, Length=238, Percent_Identity=23.9495798319328, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787112, Length=250, Percent_Identity=27.2, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17559834, Length=559, Percent_Identity=30.2325581395349, Blast_Score=223, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17553372, Length=539, Percent_Identity=32.4675324675325, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=549, Percent_Identity=27.6867030965392, Blast_Score=178, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI17558664, Length=329, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=174, Percent_Identity=29.8850574712644, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17569145, Length=295, Percent_Identity=27.1186440677966, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=32.4723247232472, Blast_Score=222, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320874, Length=512, Percent_Identity=31.640625, Blast_Score=201, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6323278, Length=386, Percent_Identity=26.6839378238342, Blast_Score=137, Evalue=6e-33,
Organism=Saccharomyces cerevisiae, GI6324314, Length=367, Percent_Identity=27.5204359673025, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6325030, Length=379, Percent_Identity=29.023746701847, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24666836, Length=543, Percent_Identity=30.939226519337, Blast_Score=225, Evalue=9e-59,
Organism=Drosophila melanogaster, GI24641342, Length=555, Percent_Identity=29.009009009009, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24642252, Length=512, Percent_Identity=30.6640625, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI18859989, Length=512, Percent_Identity=30.6640625, Blast_Score=198, Evalue=8e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70936; Mature: 70805

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVS
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCC
PFSAKNDYQIGYLTQDPDFDDRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLER
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHH
VMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLRRRVQLAQVLLGNHDLLLLD
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDY
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCCHHHH
VRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDLTMNFETSRIGKKVIEFQDVSFAYENKPILQNFNLLVQAQDRIGIVGDNGVGKSTLLN
CEEEEECCHHHHHHHHHHHHCCCEEECCCCHHHCCCEEEEECCCEEEECCCCCCHHHHHH
LIAGSLEPTAGQVVIGETVRIAYFSQQIEGLDESKRVINYLQEVAEEVKTSGGSTTSIAE
HHHCCCCCCCCCEEECCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENF
HHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
LQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKA
HHHHCCCEEEEECCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKEKVVKVREDKKRMTYQEKQEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LDEKNEALLEKYERYEYLSEFDS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVS
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCC
PFSAKNDYQIGYLTQDPDFDDRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLER
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHH
VMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLRRRVQLAQVLLGNHDLLLLD
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
EPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDY
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHCCCHHHH
VRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDLTMNFETSRIGKKVIEFQDVSFAYENKPILQNFNLLVQAQDRIGIVGDNGVGKSTLLN
CEEEEECCHHHHHHHHHHHHCCCEEECCCCHHHCCCEEEEECCCEEEECCCCCCHHHHHH
LIAGSLEPTAGQVVIGETVRIAYFSQQIEGLDESKRVINYLQEVAEEVKTSGGSTTSIAE
HHHCCCCCCCCCEEECCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENF
HHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
LQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKA
HHHHCCCEEEEECCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKEKVVKVREDKKRMTYQEKQEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LDEKNEALLEKYERYEYLSEFDS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]