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The map label for this gene is 221232242

Identifier: 221232242

GI number: 221232242

Start: 1451247

End: 1451444

Strand: Reverse

Name: 221232242

Synonym: SPN23F_14940

Alternate gene names: NA

Gene position: 1451444-1451247 (Counterclockwise)

Preceding gene: 221232243

Following gene: 221232240

Centisome position: 65.34

GC content: 39.9

Gene sequence:

>198_bases
ATGTCACTTGAAAACAAATTGGAACAAGCAACAGGCGCTGTCAAAGAAGGTTTTGGTAAAGTTACTGGAGACAGCAAGAC
AGAACTTGAAGGAGCTGTTGAAAAAACAGTTGCTAAGGCAAAAGACGTTGTAGAAGACGCAAAAGGTGCTGTAGAAGGTG
CCGTTGAAGGTTTGAAAAACGTTTTTACTAAAGAATAG

Upstream 100 bases:

>100_bases
TTTCTTGTTTCTGAGTACATTGTTTGACTTTCCTTAGTATTCGGTATAAACTATATGTAACCGGTAACACATATCGGAAT
AAACTAAAGGAGACAATCAT

Downstream 100 bases:

>100_bases
GAAAAAATCAAGGGTTTCATTTTCCCTTGATTTTTTCTATTCTTATAAATAATTTTCTGCGACGGCTGTATCTCCTGGGT
AGGATTCTTTCTTGCCCTGG

Product: CsbD-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTKE

Sequences:

>Translated_65_residues
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTKE
>Mature_64_residues
SLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKNVFTKE

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6768; Mature: 6636

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKN
CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTKE
HHCCC
>Mature Secondary Structure 
SLENKLEQATGAVKEGFGKVTGDSKTELEGAVEKTVAKAKDVVEDAKGAVEGAVEGLKN
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFTKE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11544234 [H]