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The map label for this gene is aroD [H]

Identifier: 221232119

GI number: 221232119

Start: 1313811

End: 1314488

Strand: Reverse

Name: aroD [H]

Synonym: SPN23F_13430

Alternate gene names: 221232119

Gene position: 1314488-1313811 (Counterclockwise)

Preceding gene: 221232120

Following gene: 221232118

Centisome position: 59.18

GC content: 43.95

Gene sequence:

>678_bases
ATGAAATTAATCGTTTCAGTAATGCCAAGAAGTTTAGAGGAGGCTCAGGCTCTGAGTGCCACGAGGTACCTGGATGCCGA
CATCATTGAATGGCGTGCCGACTATCTGCCTAAAGAAGCGATTTTGCAGGTAGCTCCAGCCATTTTTGAAAAATTCGCAG
GCCGTGAGTTGGTTTTCACGCTACGAACTCGCTCCGAAGGTGGAGAAATCGACCTTTCTCCAGAAGAGTATATCCATCTA
ATCAAGGAAGTTGCGCAATTCTATCAACCAGACTATATTGATTTTGAGTACTATAGCTACAAGGATGTTTTTGAGGAAAT
GCTGGACTTCCCAAATCTTGTTTTGAGTTACCATAATTTCCAAGAAACACCTGAGAACATGATGGAAATCTTGTCAGAGT
TGACGATCCTAAATCCAAAACTTGTTAAGGTTGCGGTGATGGCTCACACGGAGCAGGATGTCTTAGACTTGATGAACTAT
ACACGAGGCTTTAAAACCCTCAATCCTGAACAGGAATATGTGACCATTTCTATGGGTAAGGTGGGCAAGGTCTCTCGTAT
CACTGCGGATGTGACTGGTTCGAGTTGGTCTTTTGCCAGTCTGGATGAGGTTAGTGCCCCTGGGCAGATTTCTCTAGCTA
GCATGAAAAAAATCAGGGAGATTTTGGATGAAGCTTGA

Upstream 100 bases:

>100_bases
ACCAGATTTTAAACAAATATGGTCTTCCAGCAGATTTTGCCTATAATAAAAAAGATGAAAGTAGTAATTACCTCAAGGTG
ATTAGTATGAAGGTTAGTAA

Downstream 100 bases:

>100_bases
TGGCTATACACGTTTAGCTGCAGTTGTTGCCAATCCTATTAAGCATTCTATTTCTCCCTTCATCCACAATAGAGCCTTTG
AGGCGACAGCTACCAACGGT

Product: 3-dehydroquinate dehydratase

Products: NA

Alternate protein names: 3-dehydroquinase; Type I DHQase [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKLIVSVMPRSLEEAQALSATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHL
IKEVAQFYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNFQETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNY
TRGFKTLNPEQEYVTISMGKVGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA

Sequences:

>Translated_225_residues
MKLIVSVMPRSLEEAQALSATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHL
IKEVAQFYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNFQETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNY
TRGFKTLNPEQEYVTISMGKVGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA
>Mature_225_residues
MKLIVSVMPRSLEEAQALSATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFTLRTRSEGGEIDLSPEEYIHL
IKEVAQFYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNFQETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNY
TRGFKTLNPEQEYVTISMGKVGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA

Specific function: Aromatic amino acids biosynthesis; shikimate pathway; third step. [C]

COG id: COG0710

COG function: function code E; 3-dehydroquinate dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I 3-dehydroquinase family [H]

Homologues:

Organism=Escherichia coli, GI1787984, Length=236, Percent_Identity=30.9322033898305, Blast_Score=118, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001381 [H]

Pfam domain/function: PF01487 DHquinase_I [H]

EC number: =4.2.1.10 [H]

Molecular weight: Translated: 25726; Mature: 25726

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIVSVMPRSLEEAQALSATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFT
CCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE
LRTRSEGGEIDLSPEEYIHLIKEVAQFYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNF
EEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHCH
QETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVTISMGK
HCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
VGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA
CCCHHEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLIVSVMPRSLEEAQALSATRYLDADIIEWRADYLPKEAILQVAPAIFEKFAGRELVFT
CCEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEE
LRTRSEGGEIDLSPEEYIHLIKEVAQFYQPDYIDFEYYSYKDVFEEMLDFPNLVLSYHNF
EEECCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHCH
QETPENMMEILSELTILNPKLVKVAVMAHTEQDVLDLMNYTRGFKTLNPEQEYVTISMGK
HCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
VGKVSRITADVTGSSWSFASLDEVSAPGQISLASMKKIREILDEA
CCCHHEEEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA