| Definition | Streptococcus pneumoniae ATCC 700669, complete genome. |
|---|---|
| Accession | NC_011900 |
| Length | 2,221,315 |
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The map label for this gene is 221232063
Identifier: 221232063
GI number: 221232063
Start: 1255346
End: 1258159
Strand: Reverse
Name: 221232063
Synonym: SPN23F_12840
Alternate gene names: NA
Gene position: 1258159-1255346 (Counterclockwise)
Preceding gene: 221232064
Following gene: 221232062
Centisome position: 56.64
GC content: 38.24
Gene sequence:
>2814_bases ATGAAGGATAAAAGAGAAATCATACGTGCCCGAAAGGCATTTAGAAGAAGTCTAAAAGATGAGAAGAAATTCTTGAAAAA AGGAAAGAAGGAGGTGAAGAAACAGAAAAAAGATTCCGCTGTACTGGATGAAAAAGCATGGAAAAAAGAGATAAAGAAAA AGCTAGAGGAGATGAGAGAAGCTTCAAAGGCTAGAGTAAAACAAGCAAATGAAGACTACAATCATATTCTTCAAAATAGT CCTCCATCTCTTTTAAATCGCAAAGAATTAAGAGACAGACGATTACCTCATGCTAGGAAACGATTGAAAATAGCAAAGAA GCAATATAGAGAAGCCAAGGTAGAAGCAAAAGAAGAAAGAAAAGAGAGTCGTAAAGAAAGAAAAACCAATCAAAAATTTC TTTATGGTCAGGAATCGAAAGCAAAATCCAATTTTTTCTTTCAAGGGAAGAGTTTAGAAGAATTAAAAGTTAAGAAAGAA GTCAAGACCGCAAAAGAGAATCTAAAATCTACTAAACAAGCCTATAAGTCCAAAAAAGTCAGTAGGAAAGCCAAAACTTT TCTTTATGTCCTTGGACGTGAAGGTGGAGAGTTAGCTTCAGAAAATGAAGATTTAGATGGTTATCGCACACTTCAAGAGA CAATTAGAAAAGGGAAACGCTACAGTCGCCTTTCTTATAACCTTGGAAAAGCTAGTGTCAAAACAGGACAAGCAACATGT CGTTTTACCAAGAAAAGACTGACCAACACAAAAGAGCGATACCATCATTTTAAGGATGGAAAAGGATGGAAACTAGCGAA AGATAAGCCAAGTTCCTTTAAAAATCGGTTTCGAAAATTAAAGAAACAAGGTCTTACAAGTGTCCGAAATATCTATCAAA AACTAAAAGCAGCCTTTTCCTTCTTTACATTTGCGGCTGGAAATCCTGTAACCTGGATAGTTGGAGGAATAGTCTTTCTT CTTTTACTTATAATGAGCTTCTTTTTAGGATTTTCATCTGCTAGTTTGATTCAACAAGATGAATTTGAATTAACAAAAGC TTATACCCACCTAACTTGGGAAGACGCAGAACATACTCGTACAAATGACAAAGGAATTACCTATTACACAAAAGTTGATG ATGTGATGGGGTATATGAACTTTAAATTCCATGACTATGAGTTACACAAACCAGTTCACTTATTTAGTTCAGAAACTTAC AAGGATTATCTATCTACTTTGTGGCATGATTTAAACGATGGGGAAGATTTGAAATCCATGCAAGACCTCTATGAAACTCC TAAGTATAAACTATCGAAAGACGATCAAGAGGAAATGAAGGAACTAAAAGAAGAAGGTATCTATGCTTCCATGCAGGAAT TGGACAATCCATTTGAAGGGAAAAGTAACGAAGATAGTTTGACCATGACTTATCGTTACGGATATTATGATCTAGACGGA AAACCTACCCTTCAGGAGTACATTCTACTAGAAGCAAAGGCTCACCAAACAATTGTCGCACCAATGGATGGAGTTGTATC TCTAGATGGAGACAATGTTATTCTCACTAACGGAAAAGGAGAGAATGAGAGTCGATTGACCTTGTATTCTATTCATAATG GCCGTGCGATTGAGGGAACAAGAGTCCTAACAGGTGATATTATTGGTGAAACACCAGACGATACAGGTTTGAAAGTTTCC TATCAAAAGTATAAGAACAAGAAAGAAAAATTGGTGTATGTCAATCCGCAATTTTATTTTCCAAAAGTCATTCAACTTCA GACCACTATCTTACCAGCCATTGGTCAGTTTGGTGGGGATGAGTTTGAACGAGCAAAACATATTTATGAGTTTTTGAAAT CTCAAGGGGCAAGTCCCCAAGCCATTGCGGCTATTTTAGGAAATTGGTCGGTAGAGTCTTCTATCAATCCTAAACGAGCT GAGGGAGATTATTTATCTCCTCCAGTTGGCGCTACCGATTCCTCATGGGATAATGAAACCTGGTTAGCGATAGGAGGACC AGCCATTTATAGTGGTGCTTATCCTAATATTCTTCATAGAGGTTTAGGTTTAGGGCAATGGACGGATACTGCAGATGGTT CAACACGTCATACAGCTTTATTGAATTATGCACATAGCAAAAATAAGAAGTGGTATGATTTAGACCTCCAACTTGATTTT ATGCTTCATGGGGATAGTCCTTACTATCAAAGTTGGTTAAAGGATTTCTTTGGAAATACAGGCAGTGCAGCCAATCTGGC CCAACTCTTCCTCACCTATTGGGAGGGAAATTCTGGTGACAAACTACTGGAAAGACAAACCAGAGCAACGGAATGGTATT ACCAAATTGAAAAAGGCTTTAGTCAAACAAATGGAGGACAGGCAAAGAGTGATCCACAATCCCTTGAAGGGGTTCGTGGG GACTTGTATGATCATTCTGTTCCTGGTGGTGGAGATGGTATGGCCTATGCTTATGGACAATGTACATGGGGTGTTGCGGC TCGTATGAACCAGTTAGGCTTAAAATTAAAAGGTAGAAATGGAGAAAAGATTTCAATCATTAATACCATGGGAAATGGTC AGGACTGGGTTGCGACAGCTTCAAGTCTTGGTGGAGAAACGGGTTCCACACCAAAAGCAGGTGCTATTGTCTCTTTTGTA GGAGGTACACATGGTACACCAGCTATATACGGTCATGTGGCTTTTGTAGAGAAGGTCTATGATGATGGTTCTTTCCTTGT GTCTGAAACCAACTATGGTGGCAATCCTAACTATACCTTTAGAAAAATCTCGCAAGCAGATAGCGCCATTAGTTTTGCCT ATACTACGAAATAG
Upstream 100 bases:
>100_bases TTGTAGTTCCCTTTAAAAATAAGATTCCTAAAGGCACTCAATTGTTTGATATCATGAGTACAGATCCTGATAAAATGGCT TCTAATTAAGGGGAAGGTAA
Downstream 100 bases:
>100_bases AAGAGTTTATACTTGAAATTTTAACCATTTTCAGGTAGAATAAATAGTGTAGATGAGTAGTCGGCTCATGGTCAATCTGA TAGTAATCTTGGACATAAGG
Product: conjugal transfer protein
Products: NA
Alternate protein names: Surface Antigen; Immunogenic Secreted Protein; CHAP Domain Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; Immunogenic Secreted Protein Homologue; CHAP Domain Family N-Acetylmuramoyl-L-Alanine Amidase; Secretory Antigen SsaA; LysM Domain Protein; Transfer Protein; CHAP Domain Protein; N-AcetylMuramoyl-L-Alanine Amidase; Family 4 N-Acetylmuramoyl-L-Alanine Amidase; Peptidoglycan Hydrolase
Number of amino acids: Translated: 937; Mature: 937
Protein sequence:
>937_residues MKDKREIIRARKAFRRSLKDEKKFLKKGKKEVKKQKKDSAVLDEKAWKKEIKKKLEEMREASKARVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQYREAKVEAKEERKESRKERKTNQKFLYGQESKAKSNFFFQGKSLEELKVKKE VKTAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLDGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATC RFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGIYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDNETWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPKAGAIVSFV GGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
Sequences:
>Translated_937_residues MKDKREIIRARKAFRRSLKDEKKFLKKGKKEVKKQKKDSAVLDEKAWKKEIKKKLEEMREASKARVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQYREAKVEAKEERKESRKERKTNQKFLYGQESKAKSNFFFQGKSLEELKVKKE VKTAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLDGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATC RFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGIYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDNETWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPKAGAIVSFV GGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK >Mature_937_residues MKDKREIIRARKAFRRSLKDEKKFLKKGKKEVKKQKKDSAVLDEKAWKKEIKKKLEEMREASKARVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQYREAKVEAKEERKESRKERKTNQKFLYGQESKAKSNFFFQGKSLEELKVKKE VKTAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLDGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATC RFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGIYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDNETWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPKAGAIVSFV GGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
Specific function: Unknown
COG id: COG3942
COG function: function code R; Surface antigen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106467; Mature: 106467
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKREIIRARKAFRRSLKDEKKFLKKGKKEVKKQKKDSAVLDEKAWKKEIKKKLEEMRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKARVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQYREAKVEAKEER HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRKERKTNQKFLYGQESKAKSNFFFQGKSLEELKVKKEVKTAKENLKSTKQAYKSKKV HHHHHHHHCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKAKTFLYVLGREGGELASENEDLDGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATC HHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHH RFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFS HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTFAAGNPVTWIVGGIVFLLLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEECCCHHCC TNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETYKDYLSTLWHDLNDGEDLKSM CCCCCEEEEEEHHHHHHHHCCEEECEECCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHH QDLYETPKYKLSKDDQEEMKELKEEGIYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG HHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEEECEEECCC KPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGT CCCHHHHHEEECCCCCEEEECCCCEEEECCCEEEEECCCCCCCCEEEEEEECCCCEECCC RVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGD EEEECCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH EFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDNET HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLDLQLDF EEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEE MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGF EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC SQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRN CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEECCC GEKISIINTMGNGQDWVATASSLGGETGSTPKAGAIVSFVGGTHGTPAIYGHVAFVEKVY CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK CCCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKDKREIIRARKAFRRSLKDEKKFLKKGKKEVKKQKKDSAVLDEKAWKKEIKKKLEEMRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKARVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQYREAKVEAKEER HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRKERKTNQKFLYGQESKAKSNFFFQGKSLEELKVKKEVKTAKENLKSTKQAYKSKKV HHHHHHHHCCCCEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKAKTFLYVLGREGGELASENEDLDGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATC HHHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHH RFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFS HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTFAAGNPVTWIVGGIVFLLLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEECCCHHCC TNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETYKDYLSTLWHDLNDGEDLKSM CCCCCEEEEEEHHHHHHHHCCEEECEECCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHH QDLYETPKYKLSKDDQEEMKELKEEGIYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG HHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEEEEEECEEECCC KPTLQEYILLEAKAHQTIVAPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGT CCCHHHHHEEECCCCCEEEECCCCEEEECCCEEEEECCCCCCCCEEEEEEECCCCEECCC RVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGD EEEECCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH EFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDNET HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE WLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYAHSKNKKWYDLDLQLDF EEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEE MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGF EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC SQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRN CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEECCC GEKISIINTMGNGQDWVATASSLGGETGSTPKAGAIVSFVGGTHGTPAIYGHVAFVEKVY CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK CCCCEEEEECCCCCCCCCHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA