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The map label for this gene is 221232010

Identifier: 221232010

GI number: 221232010

Start: 1195684

End: 1196220

Strand: Reverse

Name: 221232010

Synonym: SPN23F_12270

Alternate gene names: NA

Gene position: 1196220-1195684 (Counterclockwise)

Preceding gene: 221232011

Following gene: 221232009

Centisome position: 53.85

GC content: 39.29

Gene sequence:

>537_bases
ATGAAATTGAGTTATGAAGATAAAGTTCAGATCTATGAACTAAGAAAGCAAGGACAAAGCTTCAAACAGCTTTCAAAAAG
ATTTGGTGTGGATGTTTCTGGTCTAAAGTACATGGTGAAATTAATTGACCGTTATGGCATAGAAATCGTTAAAAAAGGGA
AGAATCGTCACTATTCTTCTAAATTGAAACAAGAAATGATGGATAAAGCCTTACTGGAAGGTTGTTCACAAAGAAGTATT
AGTCTTGATTATGCCCTCCCAAACCAAGGAATGCTTTCATTTTGGCCGGCACAATACAAGAAAAACGGGTATACTATTGT
TGAGAAAACAAGAGGGAGACCAGCTAAAATGGGACGTAAACGGAAGAAGACTTGGGAAGAAATGACAGAACTAGAACGAC
TCCAGGAGGAGAATGAACGCTTACGGACTGAGGTGGCCTACCTAAAAAAGTTAAAAGAGTTAGAGGAAAGGGACGAAGCC
CTAGAGCGAGAAAGGCAGAGACAGTTAGAGAAATGGTTTCAGGAGGATTTCGACTAG

Upstream 100 bases:

>100_bases
TTTCATTTAGTTTATTCAGTACAAATTTAACGGGTCAAGATTTATTGAACTGCACCCCAATAGTTAGACAGAAAAAATCT
AACTTTTGGGGTGTTTTATT

Downstream 100 bases:

>100_bases
ATTTTCTTCTTGAAACAGCACGTTTAGCTCGCTCGACTTACTATTATCAGTTGAAACAACTGGATGGGGTTGATAAAGAT
AAAGAGATTAAAACCGAAAT

Product: IS861 transposase Orf1

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; DNA Integrase; Low Quality Protein; IS3-Spn1 Transposase; Transposase Subfamily Protein

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSSKLKQEMMDKALLEGCSQRSI
SLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRKRKKTWEEMTELERLQEENERLRTEVAYLKKLKELEERDEA
LERERQRQLEKWFQEDFD

Sequences:

>Translated_178_residues
MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSSKLKQEMMDKALLEGCSQRSI
SLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRKRKKTWEEMTELERLQEENERLRTEVAYLKKLKELEERDEA
LERERQRQLEKWFQEDFD
>Mature_178_residues
MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSSKLKQEMMDKALLEGCSQRSI
SLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRKRKKTWEEMTELERLQEENERLRTEVAYLKKLKELEERDEA
LERERQRQLEKWFQEDFD

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21458; Mature: 21458

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSS
CCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KLKQEMMDKALLEGCSQRSISLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRK
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHH
RKKTWEEMTELERLQEENERLRTEVAYLKKLKELEERDEALERERQRQLEKWFQEDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSS
CCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KLKQEMMDKALLEGCSQRSISLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRK
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHH
RKKTWEEMTELERLQEENERLRTEVAYLKKLKELEERDEALERERQRQLEKWFQEDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA