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The map label for this gene is ntpC [H]

Identifier: 221231994

GI number: 221231994

Start: 1178339

End: 1179346

Strand: Reverse

Name: ntpC [H]

Synonym: SPN23F_12110

Alternate gene names: 221231994

Gene position: 1179346-1178339 (Counterclockwise)

Preceding gene: 221231995

Following gene: 221231993

Centisome position: 53.09

GC content: 29.46

Gene sequence:

>1008_bases
ATGGATACTAATCTTTTTTCAAAAATAAATACGACGATTTCGGTAAAAGAAAACGATTTTATTACAGAAGAAAAATTTCA
AAAAATTATACAATCCAAAGATACGGAGACATTGGCATTTATCTTAGAAGCAACTCCCTATCATTTATCGATTGACGTTT
TAGAAAATCCTAGTCAGACAGAGATTTCGCTAATGACAAAATTAGTCAATGATTATAGATGGGCCTATGCTGAAAGTCCG
TCTGATAAAATTGTGACTTTATTTGCTTTACGATATGTTTATCATAATATCAAAGTTTTATTAAAATCTAAGGCGGCAAT
TAAGAAAGATTTTTCTAAATTATTAATTCCAATAGGGATTTTTGATATAGAAAGTTTAAAACATTTAGTTTCTTCCTTAC
ATTCAGATACACTTCCTGATTTTATGGTTCATGAAGTAGAATCAATTTGGAATGAGTATGAAACTTTTAATAATATTCGT
GTACTTGATGTCGGAGCTGATCTAGCATATTTTAAACATCTGAAACTTTTATCTAATGAGTTAGGTGAGGTGCTGTCTCA
GGTTATTGTTGCAATGATTGACTTTTATAATATTATTACTGTAAAACGTGGTTTATCTCAAAATAAGAGTCATGGGGATA
TTTTACAATTACTTTCAGATGAAGGAAGTATTTCTGCTAAAGAATTTATATACATTGTAGAAAATCAAGAAATATTTGTG
TGGTTCAATAAAATAAATCCAAGCTTAGATTCAATCTTTTCAACTTACGAATTGAAGATGCAGGACGCAACAATTTCATC
TTCTGAGTTAGAATTTTTATGTGATTTACTATTGTATAAAACTTTAGATCAAGGAAGGTATAATGTAGATGGGCCGTTAG
TTCTTGCTAGATATTTATTGGGATGTGAGTTTGAAGTAAAGAATCTTAGAATGATCATATCAGCTCTTCAAAATACAATT
CCTTTTGAATCAATAAAAGAAAGGATACGCCCGCATTATGGAAGCTAA

Upstream 100 bases:

>100_bases
AGTTCAAGTATCGCAAATCAAATTTTTATCAATTAAGGATGAAATTGGTTAATCCTTCTTAGAAATTTGGAGTATTCCAA
TAAAATTAGAAAGGTATTTT

Downstream 100 bases:

>100_bases
TAAGTATAAAATTGGCATAATTGGTAGCCATGATATTATTTTACCCTTTAGCATGATTGGGTTTGATATATTTTCTGCCT
ATCAAGAACAAGAAGCTATA

Product: V-type sodium ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: Na(+)-translocating ATPase subunit C; V-type sodium pump subunit C [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MDTNLFSKINTTISVKENDFITEEKFQKIIQSKDTETLAFILEATPYHLSIDVLENPSQTEISLMTKLVNDYRWAYAESP
SDKIVTLFALRYVYHNIKVLLKSKAAIKKDFSKLLIPIGIFDIESLKHLVSSLHSDTLPDFMVHEVESIWNEYETFNNIR
VLDVGADLAYFKHLKLLSNELGEVLSQVIVAMIDFYNIITVKRGLSQNKSHGDILQLLSDEGSISAKEFIYIVENQEIFV
WFNKINPSLDSIFSTYELKMQDATISSSELEFLCDLLLYKTLDQGRYNVDGPLVLARYLLGCEFEVKNLRMIISALQNTI
PFESIKERIRPHYGS

Sequences:

>Translated_335_residues
MDTNLFSKINTTISVKENDFITEEKFQKIIQSKDTETLAFILEATPYHLSIDVLENPSQTEISLMTKLVNDYRWAYAESP
SDKIVTLFALRYVYHNIKVLLKSKAAIKKDFSKLLIPIGIFDIESLKHLVSSLHSDTLPDFMVHEVESIWNEYETFNNIR
VLDVGADLAYFKHLKLLSNELGEVLSQVIVAMIDFYNIITVKRGLSQNKSHGDILQLLSDEGSISAKEFIYIVENQEIFV
WFNKINPSLDSIFSTYELKMQDATISSSELEFLCDLLLYKTLDQGRYNVDGPLVLARYLLGCEFEVKNLRMIISALQNTI
PFESIKERIRPHYGS
>Mature_335_residues
MDTNLFSKINTTISVKENDFITEEKFQKIIQSKDTETLAFILEATPYHLSIDVLENPSQTEISLMTKLVNDYRWAYAESP
SDKIVTLFALRYVYHNIKVLLKSKAAIKKDFSKLLIPIGIFDIESLKHLVSSLHSDTLPDFMVHEVESIWNEYETFNNIR
VLDVGADLAYFKHLKLLSNELGEVLSQVIVAMIDFYNIITVKRGLSQNKSHGDILQLLSDEGSISAKEFIYIVENQEIFV
WFNKINPSLDSIFSTYELKMQDATISSSELEFLCDLLLYKTLDQGRYNVDGPLVLARYLLGCEFEVKNLRMIISALQNTI
PFESIKERIRPHYGS

Specific function: Involved in ATP-driven sodium extrusion [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 38518; Mature: 38518

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNLFSKINTTISVKENDFITEEKFQKIIQSKDTETLAFILEATPYHLSIDVLENPSQT
CCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHEEEEEECCCCEEEEEEECCCCHH
EISLMTKLVNDYRWAYAESPSDKIVTLFALRYVYHNIKVLLKSKAAIKKDFSKLLIPIGI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIESLKHLVSSLHSDTLPDFMVHEVESIWNEYETFNNIRVLDVGADLAYFKHLKLLSNE
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
LGEVLSQVIVAMIDFYNIITVKRGLSQNKSHGDILQLLSDEGSISAKEFIYIVENQEIFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHEEEEEECCEEEE
WFNKINPSLDSIFSTYELKMQDATISSSELEFLCDLLLYKTLDQGRYNVDGPLVLARYLL
EEECCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GCEFEVKNLRMIISALQNTIPFESIKERIRPHYGS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MDTNLFSKINTTISVKENDFITEEKFQKIIQSKDTETLAFILEATPYHLSIDVLENPSQT
CCCCHHHHHCCEEEECCCCCCCHHHHHHHHHCCCCHHEEEEEECCCCEEEEEEECCCCHH
EISLMTKLVNDYRWAYAESPSDKIVTLFALRYVYHNIKVLLKSKAAIKKDFSKLLIPIGI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FDIESLKHLVSSLHSDTLPDFMVHEVESIWNEYETFNNIRVLDVGADLAYFKHLKLLSNE
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
LGEVLSQVIVAMIDFYNIITVKRGLSQNKSHGDILQLLSDEGSISAKEFIYIVENQEIFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHEEEEEECCEEEE
WFNKINPSLDSIFSTYELKMQDATISSSELEFLCDLLLYKTLDQGRYNVDGPLVLARYLL
EEECCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GCEFEVKNLRMIISALQNTIPFESIKERIRPHYGS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157629; 8144530 [H]