Click here to switch to the map view.

The map label for this gene is 221231565

Identifier: 221231565

GI number: 221231565

Start: 680338

End: 681594

Strand: Reverse

Name: 221231565

Synonym: SPN23F_06930

Alternate gene names: NA

Gene position: 681594-680338 (Counterclockwise)

Preceding gene: 221231566

Following gene: 221231539

Centisome position: 30.68

GC content: 36.67

Gene sequence:

>1257_bases
ATGGAACAATTACATTTTATCACAAAACTGCTCGATATTAAAGACCCAAACATCAAGATTCTAGATATCATCAATATGGA
TACCCACAAAGAAATTATCGCTAAGCTGGATTATGAGGCTCCATCTTGCCCTGATTGTGGAAGTCTAATGAAGAAATATG
ACTTTCAAAAACCGTCTAAGATCCCTTACCTCGAAACAACTGGTATGCCTTCTAGAATTCTCCTTAGAAAACGCCGTTTC
AAGTGCTATCACTGTTCAAAAATGATGGTTGCTGAGACTCCCCTGGTAAAGAAAAATCACCAAATCCCTCGTATCATCAA
CCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATCAGCTGGCCATTTCAACTTCAACTG
TCATTCGCAAGCTCAATGACTTTCACTTTGAGCATGATTTTTCTCGGCTTCCAAAGATTATGTCTTGGGATGAGTATGCC
TTCACTAAGGGAAAGATGAGTTTCATTGCGCAAGATTTTGATAATCTTAATATTATCACTGTTCTTGAAGGCAGAACACA
AGCTGTCATCCGAAATCACTTTCTTCGCTACGATAGAGCCGTTCGTTGTCAAGTGAAAATCATTACGATGGATATGTTTA
GTCCTTACTATGACTTGGCTAAACAGCTTTTTCCGTGTGCTAAAATCGTTCTAGATCGTTTCCATATTATCCAACATCTC
AGCCGTGCCATGAGTCGTTTTCGTGTTCAAATTATAAATCAGTTTGAACGAAAATCTCATGAATACAAGGCTATCAAACG
TTACTGGAAACTCATCCAACAGGATAGTCGTAAATTGAGCGATAAACGTTTTTATCGCCCTACTTTTCGCATGCACTTAA
CAAATAAAGAAATTCTTGACAAGATTTTAAGCTATTCAGAAGACTTGAAACACCACTATCAGATCTATCAACTCTTACTT
TTTCACTTTCAGAACAAAGACCCTGAGAAATTTTTCGGACTCATTGAGGACAATCTGAAGCAGGTTCATCCTATTTTTCA
GACTGTCTTTAAAACCTTTCTAAAGAACAAAGAAAAAATCGTCAACGCTCTTCAATTACCTTATTCCAACGCAAAATTGG
AAGCGACCAATAATCTCATCAAACTTATCAAACGAAACGCCTTTGGATTTCGGAACTTTGAAAACTTCAAAAAAAGGATT
TTTATCGCTCTGAACATCAAAAAAGAAAGGACGAATTTTGTCCTTTCTCGAGCTTAG

Upstream 100 bases:

>100_bases
AAATCCACTATAGATATTATGGAGCCTATTTTATTGTAGAAAAAAAGTCCCATATGACCTATAATGAAAAGCGACAAAAC
AACTCATTAGAAAGAATCAT

Downstream 100 bases:

>100_bases
CTGACTTCAACCCACTACAGTTGACAAAGAGCCGTATTTCTTTTACTCTCATTCTTAAGTTAAATTATTAAAATCCCATA
TTTGGTCTATCCAACCTTCA

Product: IS1167A transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLRKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIINQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKDPEKFFGLIEDNLKQVHPIFQTVFKTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTNFVLSRA

Sequences:

>Translated_418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLRKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIINQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKDPEKFFGLIEDNLKQVHPIFQTVFKTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTNFVLSRA
>Mature_418_residues
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSKIPYLETTGMPSRILLRKRRF
KCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYA
FTKGKMSFIAQDFDNLNIITVLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
SRAMSRFRVQIINQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILDKILSYSEDLKHHYQIYQLLL
FHFQNKDPEKFFGLIEDNLKQVHPIFQTVFKTFLKNKEKIVNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTNFVLSRA

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 49979; Mature: 49979

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
IPYLETTGMPSRILLRKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYAFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
EECCCHHHHHHHHHHHHCCEEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRFRVQIINQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
KILSYSEDLKHHYQIYQLLLFHFQNKDPEKFFGLIEDNLKQVHPIFQTVFKTFLKNKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTNFVLSRA
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEEEHHHHCEEEECC
>Mature Secondary Structure
MEQLHFITKLLDIKDPNIKILDIINMDTHKEIIAKLDYEAPSCPDCGSLMKKYDFQKPSK
CCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
IPYLETTGMPSRILLRKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISM
CCCEECCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TDIAHQLAISTSTVIRKLNDFHFEHDFSRLPKIMSWDEYAFTKGKMSFIAQDFDNLNIIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCHHHHHHHCCCCCEEEE
VLEGRTQAVIRNHFLRYDRAVRCQVKIITMDMFSPYYDLAKQLFPCAKIVLDRFHIIQHL
EECCCHHHHHHHHHHHHCCEEEEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRAMSRFRVQIINQFERKSHEYKAIKRYWKLIQQDSRKLSDKRFYRPTFRMHLTNKEILD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
KILSYSEDLKHHYQIYQLLLFHFQNKDPEKFFGLIEDNLKQVHPIFQTVFKTFLKNKEKI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNALQLPYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRIFIALNIKKERTNFVLSRA
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEEEEEEHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387149 [H]