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The map label for this gene is 221231084

Identifier: 221231084

GI number: 221231084

Start: 162877

End: 163317

Strand: Reverse

Name: 221231084

Synonym: SPN23F_01700

Alternate gene names: NA

Gene position: 163317-162877 (Counterclockwise)

Preceding gene: 221231086

Following gene: 221231083

Centisome position: 7.35

GC content: 40.14

Gene sequence:

>441_bases
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAAGAAACCGAAAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGAAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAAGCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Upstream 100 bases:

>100_bases
AAGACGACGCTGACGTGGTTTGAAGAGATTTTTGAAGAGTATTAATAAAGGTGTACAAGAAGTGAGATTAATTTTGTATG
AAAAACAAGGAGAGAAATTT

Downstream 100 bases:

>100_bases
AAAAACAAGTATTTCACGATGCAGCTGCCGGTGTTCTTATCGGCCTCATCCTCTCCATCCTCTTTTCACTCATTTATGCA
CCAAATACCTACGCACCACT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Sequences:

>Translated_146_residues
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL
>Mature_146_residues
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH LytTR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007492 [H]

Pfam domain/function: PF04397 LytTR [H]

EC number: NA

Molecular weight: Translated: 17170; Mature: 17170

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
CEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCEE
RFYIENRKVLAETASQTYSIDLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLV
EEHHHCCHHHHHHCCCEEEEHHHHHHHHHHCCHHHEEECCCCEEECCCCCEEEECCCCEE
EIFLKNESFTYSSRRYLKTIKEKLEL
EEEECCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQ
CEEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCEE
RFYIENRKVLAETASQTYSIDLRLYQVLKLLPSNFIQISQSEIINIDSISHLKLTPNGLV
EEHHHCCHHHHHHCCCEEEEHHHHHHHHHHCCHHHEEECCCCEEECCCCCEEEECCCCEE
EIFLKNESFTYSSRRYLKTIKEKLEL
EEEECCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]