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The map label for this gene is noc [H]

Identifier: 220933185

GI number: 220933185

Start: 2571149

End: 2571955

Strand: Reverse

Name: noc [H]

Synonym: Hore_23530

Alternate gene names: 220933185

Gene position: 2571955-2571149 (Counterclockwise)

Preceding gene: 220933186

Following gene: 220933184

Centisome position: 99.76

GC content: 36.31

Gene sequence:

>807_bases
ATGAAATTACCATTTATACAGGTCGATAAGCTAAAGGATAAAGATGGAGTAATAATGATTCCGGTAGATAAGATTGAACC
CAATCCATATCAGCCACGGAAAGATTTTAAAGAAGAGGATTTAAATGAACTGGCTGATTCTATTAAGAGTTATGGGGTTA
TTCAACCAATTACAGTGAGGGTTAAAGATGATGGCTATGAATTAATTGCAGGTGAAAGGAGGCTAAGGGCTTCTAGATAT
CTGGGATTAAATGAAATACCGGCTGTAATTAAAGAACTCACCGATCGGGAAATGGCTGAAATTGCCCTGGTAGAGAATTT
ACAGAGAAAAGACCTTAATTTTATGGAAGAGGCCAGGGCATACCAGAAGTTACTGGAACAGTTTAAATTAACTCAGAAAG
AGCTGGCCCAAAGACTCGGTAAAAGCCAGTCCACTATAGCCAATAAACTTCGCTTACTATCACTCTCAAATGATGTCCAG
GAACAAATTAATTCACCTTTAATTACAGAAAGACATGCCCGGGCCTTATTGAAACTTGATAATAAAGAACAGCAGATAAA
GGTTATTGAAGAAATTAAAGACAAGAAGTTAACCGTGAAACAGACAGAGCAAATGGTTAATAAACTCCTTGACAATAAAA
ACAGGAAGGCAAAGGTAGTAACTGTATATAAAGATTTAAGGATCTTTACAAACTCTTTGAAGAAGACCATAAATGAGATG
AAATCAGCTGGTCTGGAGGTAAAGGTGGACAAAGAAGAAAGTGATGACTTTATAGAATTTAAAATAAGGCTCCCTAAGAA
GGAGTAA

Upstream 100 bases:

>100_bases
ATACCCACGTCGGGCGGGTATTCCAAAAAAACGACCACTATAAGAAGGAAATTTAATTTTTACGAAGAATTTTATACATG
AAACAAATGGAGGTTTTACC

Downstream 100 bases:

>100_bases
AGTTTCAATAAATAACAGTCTTAATTAAGTCAGTAACTTTCATAATTGATTTTTCTAAACATCAATTATGTTAATTTTTT
ATTATGAATTTTGCTTAAGT

Product: parB-like partition protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLPFIQVDKLKDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVRVKDDGYELIAGERRLRASRY
LGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARAYQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQ
EQINSPLITERHARALLKLDNKEQQIKVIEEIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEM
KSAGLEVKVDKEESDDFIEFKIRLPKKE

Sequences:

>Translated_268_residues
MKLPFIQVDKLKDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVRVKDDGYELIAGERRLRASRY
LGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARAYQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQ
EQINSPLITERHARALLKLDNKEQQIKVIEEIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEM
KSAGLEVKVDKEESDDFIEFKIRLPKKE
>Mature_268_residues
MKLPFIQVDKLKDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVRVKDDGYELIAGERRLRASRY
LGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARAYQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQ
EQINSPLITERHARALLKLDNKEQQIKVIEEIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEM
KSAGLEVKVDKEESDDFIEFKIRLPKKE

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31178; Mature: 31178

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPFIQVDKLKDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVR
CCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
VKDDGYELIAGERRLRASRYLGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARA
EECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQEQINSPLITERHARALLKLD
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
NKEQQIKVIEEIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEM
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
KSAGLEVKVDKEESDDFIEFKIRLPKKE
HHCCCEEEECCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKLPFIQVDKLKDKDGVIMIPVDKIEPNPYQPRKDFKEEDLNELADSIKSYGVIQPITVR
CCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
VKDDGYELIAGERRLRASRYLGLNEIPAVIKELTDREMAEIALVENLQRKDLNFMEEARA
EECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
YQKLLEQFKLTQKELAQRLGKSQSTIANKLRLLSLSNDVQEQINSPLITERHARALLKLD
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
NKEQQIKVIEEIKDKKLTVKQTEQMVNKLLDNKNRKAKVVTVYKDLRIFTNSLKKTINEM
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
KSAGLEVKVDKEESDDFIEFKIRLPKKE
HHCCCEEEECCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA