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The map label for this gene is 220933120

Identifier: 220933120

GI number: 220933120

Start: 2498455

End: 2499834

Strand: Reverse

Name: 220933120

Synonym: Hore_22880

Alternate gene names: NA

Gene position: 2499834-2498455 (Counterclockwise)

Preceding gene: 220933121

Following gene: 220933119

Centisome position: 96.96

GC content: 36.01

Gene sequence:

>1380_bases
ATGGTAAATATTTTACTACAAAACATAACAGATATCAATACCTTGGAGAAGGCAGCACTGGAACTTGCAAGGCAGATAAT
GGAGAAGGTAATAGAAAAGCTTGAAGAAGAGCTATTTAAAAATAAAGATAAAAATTTAGAAGTAGTAAGATTTTTAGAAA
GAACGATATCGACTAAAGTTGGAAACATCAAGCTTAGAAGGCGACTATATAAAGACCAAAAAACAGGAAAAAGCGTCATT
TTACTGGACAAAAAACTGGGGTTAAAAAAGAAAAAAAGAGTAAGTGGAGAATACCTAAAACTGCTGGTAATACTGGCAAG
TAAGATGAGCTACAGGCAAGTGGAGGAAGTACTGGCTGAAGCCGGTTTTCCCCATTTAAGCCATACAACTATCTTTAATG
AAGTCAGGGATTTTGGAAAAAGGGAGTCAGAGAGACTCAAACATGAAAAAGAGGAAGTATTCACTGGAGGTAAGATTTTA
AAAGGAGAGGAAAAAGAAATACCACTACTATTCATTGAAGCTGACGGGATAATGGTTGGTAGTCAGGAAGAAGGAGGAAA
GAAGCTGGAAATCAAACTGGGATTAATCCATGAGGGCTGGGAATACACTAGTCCAGCAAAAAAACGGAAGAGATTGAAGG
AGCCACAAATAGTAGCAGGAGTCTATGGAAAAGCAGATGACTTTTATGAAGAATTAATCCATCAAATAAGCAAAAAATAT
AATCTTGAAAACACTTTAGTAGTATTAAACGGGGACGGTGCCAGCTGGATACAAAAGACCAGTAAGGAATACTTTGAAAA
TATAATAGTACAACTGGATAGGTATCATATAAAAAGAGATATAGGATTATACTTTGGAAGAGAAGTTGCAGATGATTTAT
GCAGGGTATTAGCAGAAGGAAGAAAGCAGGTATTTCTGGACACATTGGAATCGTTAATATGTATGGGAGAAACAGCTGAA
AACCGAGAAAAGAGGAGGAAAATAATAAAGCATTTTAAAAAGTATGAAGAGCACTTATTAGATTACAGATATCGAATACC
AACAGAATTAAGGAATAAAGAATTACATGGGATGGGAGCAGCTGAGGGCTATGTGGATAAGAATGTGGCTCGCAGGATGA
AGAACCAGGGAATGAATTGGAGCAAAAAAGGTGCTGAGGCAATGGCTAGAATTTTAATGTTAAAACATAACAAGGAATTA
AAAGAAAGACTTGGAGATCAGTATTACACAATAAAAAACCCGGTAAGGAAAATAAAATATATGTTTAAGAAAGTGGACAG
GGATTGGAGTAAGTGGTTACAGGCAAAAATACCTGCAATAAATGGTCCAGATAGCGGTAAAGATTGGGTAAAAGCAATAA
GAGGACTGGCAACTATTTAG

Upstream 100 bases:

>100_bases
TATAGAACGTGTAAAATTTAAGTAGGAAAAGAAGGAAAACAAGGTATAGATAAAGAAATAGAGACCTCAAACAAACCCGA
CCAAAGGAGTTGAGGTCTCT

Downstream 100 bases:

>100_bases
AATAAATATTTATGGGTTGTTTGAGGTGAAATATTCTTCCTACCTTTTCTTGACACGTACACCCCATATATAGTCAGTTG
AAAAAGAGACTGACTAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MVNILLQNITDINTLEKAALELARQIMEKVIEKLEEELFKNKDKNLEVVRFLERTISTKVGNIKLRRRLYKDQKTGKSVI
LLDKKLGLKKKKRVSGEYLKLLVILASKMSYRQVEEVLAEAGFPHLSHTTIFNEVRDFGKRESERLKHEKEEVFTGGKIL
KGEEKEIPLLFIEADGIMVGSQEEGGKKLEIKLGLIHEGWEYTSPAKKRKRLKEPQIVAGVYGKADDFYEELIHQISKKY
NLENTLVVLNGDGASWIQKTSKEYFENIIVQLDRYHIKRDIGLYFGREVADDLCRVLAEGRKQVFLDTLESLICMGETAE
NREKRRKIIKHFKKYEEHLLDYRYRIPTELRNKELHGMGAAEGYVDKNVARRMKNQGMNWSKKGAEAMARILMLKHNKEL
KERLGDQYYTIKNPVRKIKYMFKKVDRDWSKWLQAKIPAINGPDSGKDWVKAIRGLATI

Sequences:

>Translated_459_residues
MVNILLQNITDINTLEKAALELARQIMEKVIEKLEEELFKNKDKNLEVVRFLERTISTKVGNIKLRRRLYKDQKTGKSVI
LLDKKLGLKKKKRVSGEYLKLLVILASKMSYRQVEEVLAEAGFPHLSHTTIFNEVRDFGKRESERLKHEKEEVFTGGKIL
KGEEKEIPLLFIEADGIMVGSQEEGGKKLEIKLGLIHEGWEYTSPAKKRKRLKEPQIVAGVYGKADDFYEELIHQISKKY
NLENTLVVLNGDGASWIQKTSKEYFENIIVQLDRYHIKRDIGLYFGREVADDLCRVLAEGRKQVFLDTLESLICMGETAE
NREKRRKIIKHFKKYEEHLLDYRYRIPTELRNKELHGMGAAEGYVDKNVARRMKNQGMNWSKKGAEAMARILMLKHNKEL
KERLGDQYYTIKNPVRKIKYMFKKVDRDWSKWLQAKIPAINGPDSGKDWVKAIRGLATI
>Mature_459_residues
MVNILLQNITDINTLEKAALELARQIMEKVIEKLEEELFKNKDKNLEVVRFLERTISTKVGNIKLRRRLYKDQKTGKSVI
LLDKKLGLKKKKRVSGEYLKLLVILASKMSYRQVEEVLAEAGFPHLSHTTIFNEVRDFGKRESERLKHEKEEVFTGGKIL
KGEEKEIPLLFIEADGIMVGSQEEGGKKLEIKLGLIHEGWEYTSPAKKRKRLKEPQIVAGVYGKADDFYEELIHQISKKY
NLENTLVVLNGDGASWIQKTSKEYFENIIVQLDRYHIKRDIGLYFGREVADDLCRVLAEGRKQVFLDTLESLICMGETAE
NREKRRKIIKHFKKYEEHLLDYRYRIPTELRNKELHGMGAAEGYVDKNVARRMKNQGMNWSKKGAEAMARILMLKHNKEL
KERLGDQYYTIKNPVRKIKYMFKKVDRDWSKWLQAKIPAINGPDSGKDWVKAIRGLATI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0236 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009620 [H]

Pfam domain/function: PF06782 UPF0236 [H]

EC number: NA

Molecular weight: Translated: 53468; Mature: 53468

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNILLQNITDINTLEKAALELARQIMEKVIEKLEEELFKNKDKNLEVVRFLERTISTKV
CCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GNIKLRRRLYKDQKTGKSVILLDKKLGLKKKKRVSGEYLKLLVILASKMSYRQVEEVLAE
CHHHHHHHHHHHHCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFPHLSHTTIFNEVRDFGKRESERLKHEKEEVFTGGKILKGEEKEIPLLFIEADGIMVG
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCEEEC
SQEEGGKKLEIKLGLIHEGWEYTSPAKKRKRLKEPQIVAGVYGKADDFYEELIHQISKKY
CCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHC
NLENTLVVLNGDGASWIQKTSKEYFENIIVQLDRYHIKRDIGLYFGREVADDLCRVLAEG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVFLDTLESLICMGETAENREKRRKIIKHFKKYEEHLLDYRYRIPTELRNKELHGMGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCC
AEGYVDKNVARRMKNQGMNWSKKGAEAMARILMLKHNKELKERLGDQYYTIKNPVRKIKY
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHH
MFKKVDRDWSKWLQAKIPAINGPDSGKDWVKAIRGLATI
HHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MVNILLQNITDINTLEKAALELARQIMEKVIEKLEEELFKNKDKNLEVVRFLERTISTKV
CCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
GNIKLRRRLYKDQKTGKSVILLDKKLGLKKKKRVSGEYLKLLVILASKMSYRQVEEVLAE
CHHHHHHHHHHHHCCCCEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGFPHLSHTTIFNEVRDFGKRESERLKHEKEEVFTGGKILKGEEKEIPLLFIEADGIMVG
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCEEEC
SQEEGGKKLEIKLGLIHEGWEYTSPAKKRKRLKEPQIVAGVYGKADDFYEELIHQISKKY
CCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHC
NLENTLVVLNGDGASWIQKTSKEYFENIIVQLDRYHIKRDIGLYFGREVADDLCRVLAEG
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQVFLDTLESLICMGETAENREKRRKIIKHFKKYEEHLLDYRYRIPTELRNKELHGMGA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHCCCCC
AEGYVDKNVARRMKNQGMNWSKKGAEAMARILMLKHNKELKERLGDQYYTIKNPVRKIKY
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEHHHHHHHHHHH
MFKKVDRDWSKWLQAKIPAINGPDSGKDWVKAIRGLATI
HHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA