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The map label for this gene is tpn32 [H]

Identifier: 220933060

GI number: 220933060

Start: 2428634

End: 2429425

Strand: Reverse

Name: tpn32 [H]

Synonym: Hore_22280

Alternate gene names: 220933060

Gene position: 2429425-2428634 (Counterclockwise)

Preceding gene: 220933061

Following gene: 220933058

Centisome position: 94.23

GC content: 42.05

Gene sequence:

>792_bases
GTGAGAAGAAATATAATCTTTTTTCTGGTGTTGATTTTTGTTCTGGGAGTAGGTAGTATAGCCCTGGCCGGGGATAAGGT
ATTAAAGGTAGGAGCGACACCAGTTCCCCATGCTGAGATACTCGAATTTGTGAAACCTATTCTGGAAAAGGAAGGCATTA
AACTTGAGATAGTGGAGTTTACTGACTATGTTACCCCCAACCTGGCCCTTGCCGAGGGAAGCATTGATGCCAACTATTTT
CAGCACGTACCTTATTTAAATCAGTTCAAAAAGGACCATAACCTTGATATAACCTATACCCTTAAAATACATGTTGAGCC
CTTTGGGCTGTATTCAGAAAAAATAGATTCCATTGATGACCTGCCCGCGGGTGCCAGAATAGCCCTGCCCAATGATCCCT
CCAACGAGGGGCGGGCCCTGTTGTTGCTCGAGAGTAAAGGGTTTATTAAATTAGATGCAGAAGATAAATTAAAGGCTACC
CCTTTTGATATTGTTGAGAATCCCTATAACCTTAAATTTGTAGAGCTGGAAGCAGCGACTTTACCCCGGATATTACCTGA
TGTTATGGCAGCCTTTATCAATACTAACTATGCCCTGGAAGCTGGACTGAATCCTTTAAAGGATGCCCTTATTATTGAGG
GTAGTGAATCCCCATATTCCAATGTTCTGGCTGTTAGAACAGAAGATAAAGATAACCCCCTGATTATAAAGCTGGGTGAA
GTATTAACGAGCCAGAAGGTAAAAGATTTTATCCTGGAGAAGTATAAAGGAGCAGTTGTGCCGGTGTTTTAA

Upstream 100 bases:

>100_bases
GGCTTGGTAATTACCTGGCAAGCCGTTTTGACCATCGTTAATATGAAGGCTCAGCTTTTTTTACCGTGAAAATTATAAAA
AAGAAAAGGAGAGATGAGAA

Downstream 100 bases:

>100_bases
GGGTATGTCCTTTACATTAAATTTAACTATAACGCTGCTATCACTGGCTTTAGGCCAGAGATTGTGTCTTTAAGGTATTT
TCTTTACATTTAATATAACT

Product: NLPA lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRRNIIFFLVLIFVLGVGSIALAGDKVLKVGATPVPHAEILEFVKPILEKEGIKLEIVEFTDYVTPNLALAEGSIDANYF
QHVPYLNQFKKDHNLDITYTLKIHVEPFGLYSEKIDSIDDLPAGARIALPNDPSNEGRALLLLESKGFIKLDAEDKLKAT
PFDIVENPYNLKFVELEAATLPRILPDVMAAFINTNYALEAGLNPLKDALIIEGSESPYSNVLAVRTEDKDNPLIIKLGE
VLTSQKVKDFILEKYKGAVVPVF

Sequences:

>Translated_263_residues
MRRNIIFFLVLIFVLGVGSIALAGDKVLKVGATPVPHAEILEFVKPILEKEGIKLEIVEFTDYVTPNLALAEGSIDANYF
QHVPYLNQFKKDHNLDITYTLKIHVEPFGLYSEKIDSIDDLPAGARIALPNDPSNEGRALLLLESKGFIKLDAEDKLKAT
PFDIVENPYNLKFVELEAATLPRILPDVMAAFINTNYALEAGLNPLKDALIIEGSESPYSNVLAVRTEDKDNPLIIKLGE
VLTSQKVKDFILEKYKGAVVPVF
>Mature_263_residues
MRRNIIFFLVLIFVLGVGSIALAGDKVLKVGATPVPHAEILEFVKPILEKEGIKLEIVEFTDYVTPNLALAEGSIDANYF
QHVPYLNQFKKDHNLDITYTLKIHVEPFGLYSEKIDSIDDLPAGARIALPNDPSNEGRALLLLESKGFIKLDAEDKLKAT
PFDIVENPYNLKFVELEAATLPRILPDVMAAFINTNYALEAGLNPLKDALIIEGSESPYSNVLAVRTEDKDNPLIIKLGE
VLTSQKVKDFILEKYKGAVVPVF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=254, Percent_Identity=41.7322834645669, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1790093, Length=241, Percent_Identity=36.5145228215768, Blast_Score=151, Evalue=5e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29177; Mature: 29177

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNIIFFLVLIFVLGVGSIALAGDKVLKVGATPVPHAEILEFVKPILEKEGIKLEIVEF
CCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
TDYVTPNLALAEGSIDANYFQHVPYLNQFKKDHNLDITYTLKIHVEPFGLYSEKIDSIDD
CCCCCCCEEEECCCCCCHHHHCCCHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHCCCCC
LPAGARIALPNDPSNEGRALLLLESKGFIKLDAEDKLKATPFDIVENPYNLKFVELEAAT
CCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEHHH
LPRILPDVMAAFINTNYALEAGLNPLKDALIIEGSESPYSNVLAVRTEDKDNPLIIKLGE
HHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEHHH
VLTSQKVKDFILEKYKGAVVPVF
HHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure
MRRNIIFFLVLIFVLGVGSIALAGDKVLKVGATPVPHAEILEFVKPILEKEGIKLEIVEF
CCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
TDYVTPNLALAEGSIDANYFQHVPYLNQFKKDHNLDITYTLKIHVEPFGLYSEKIDSIDD
CCCCCCCEEEECCCCCCHHHHCCCHHHHHCCCCCCEEEEEEEEEEEECCCHHHHHCCCCC
LPAGARIALPNDPSNEGRALLLLESKGFIKLDAEDKLKATPFDIVENPYNLKFVELEAAT
CCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCHHHHCCCCCEEEEEEEHHH
LPRILPDVMAAFINTNYALEAGLNPLKDALIIEGSESPYSNVLAVRTEDKDNPLIIKLGE
HHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEHHH
VLTSQKVKDFILEKYKGAVVPVF
HHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]