| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is comB [H]
Identifier: 220933011
GI number: 220933011
Start: 2368815
End: 2369543
Strand: Reverse
Name: comB [H]
Synonym: Hore_21780
Alternate gene names: 220933011
Gene position: 2369543-2368815 (Counterclockwise)
Preceding gene: 220933012
Following gene: 220933010
Centisome position: 91.91
GC content: 40.6
Gene sequence:
>729_bases GTGCCTGATATATATATTACTCTAACGCCAGATGAACTCAAAAATATCCCTGATAAGGGAGTTATAGTAGTAGTTATTGA TACCCTGAGGGCCAGTACAACTATAGTTACTGCCCTGGCCAACGGGGCCAGGAAGGTCATACCATTTGCCACCAGCAGCA AATTACAGGAGTATTATCGAAAAAATCCTTCGGCCCATTATATGCTCTGTGGAGAGAAAGGAGGAGAAAAAATACCGGGG TTTGACCTCGGTAACTCTCCTTCTGAAATAAGTCCAGGAATGGTTATGGATAAAATTATGCTGATTAAAACAACAAACGG CACCAGGGTCCTTGAGGATATTAGCTCAGATAACAGGGTTTACATAGGGGCTCTTGTTAACAGTTGTGCTGTCGTCGAAG AGGTTAAAAAGAAAGAGAAAGATGTTTACCTTGTCTGTGCAGGTACTAGAGGCAAGTTTTCACTGGAAGATTTTTTTGCA GCCGGCAGGTTTTCTTCTTTACTTATGAATGAAGGATGGAATGGTGGCGATCTGGAGTTTGCTGCAGCAAGAATATTTGA AGATAATAGCAGTTATCAGGAAACGATTAATTTGTTTCACCATTCCCAGAATGGTCAGAATTTAAGAGAACTCGGTTATA AAGAGGATATTAAATTCGCTGCCCGTCGTGATATTTTTTCCATAGTTCCTTACTGGGATGGAATCAAGATTAGAATAAGT AGACGATGA
Upstream 100 bases:
>100_bases GAAGTTATAGCCCTGGAAGCGTTGAGAAGGGGGTTACGAGGGGATACCTTTAAGAGTACCTTACCTGATGAAGGAAAAGA AGGTGAGGAGAGGATGATCG
Downstream 100 bases:
>100_bases AATACTAATTTCCCCTCTGCATACATAAGTATATTCATAAAAACAGTAGAATGGGGGGGAATTGGTGAATATTAAATATT TTCTACTTATAATAACTATC
Product: 2-phosphosulfolactate phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPDIYITLTPDELKNIPDKGVIVVVIDTLRASTTIVTALANGARKVIPFATSSKLQEYYRKNPSAHYMLCGEKGGEKIPG FDLGNSPSEISPGMVMDKIMLIKTTNGTRVLEDISSDNRVYIGALVNSCAVVEEVKKKEKDVYLVCAGTRGKFSLEDFFA AGRFSSLLMNEGWNGGDLEFAAARIFEDNSSYQETINLFHHSQNGQNLRELGYKEDIKFAARRDIFSIVPYWDGIKIRIS RR
Sequences:
>Translated_242_residues MPDIYITLTPDELKNIPDKGVIVVVIDTLRASTTIVTALANGARKVIPFATSSKLQEYYRKNPSAHYMLCGEKGGEKIPG FDLGNSPSEISPGMVMDKIMLIKTTNGTRVLEDISSDNRVYIGALVNSCAVVEEVKKKEKDVYLVCAGTRGKFSLEDFFA AGRFSSLLMNEGWNGGDLEFAAARIFEDNSSYQETINLFHHSQNGQNLRELGYKEDIKFAARRDIFSIVPYWDGIKIRIS RR >Mature_241_residues PDIYITLTPDELKNIPDKGVIVVVIDTLRASTTIVTALANGARKVIPFATSSKLQEYYRKNPSAHYMLCGEKGGEKIPGF DLGNSPSEISPGMVMDKIMLIKTTNGTRVLEDISSDNRVYIGALVNSCAVVEEVKKKEKDVYLVCAGTRGKFSLEDFFAA GRFSSLLMNEGWNGGDLEFAAARIFEDNSSYQETINLFHHSQNGQNLRELGYKEDIKFAARRDIFSIVPYWDGIKIRISR R
Specific function: Unknown
COG id: COG2045
COG function: function code HR; Phosphosulfolactate phosphohydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005238 - InterPro: IPR022995 [H]
Pfam domain/function: PF04029 2-ph_phosp [H]
EC number: =3.1.3.71 [H]
Molecular weight: Translated: 27015; Mature: 26884
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDIYITLTPDELKNIPDKGVIVVVIDTLRASTTIVTALANGARKVIPFATSSKLQEYYR CCCEEEEECHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH KNPSAHYMLCGEKGGEKIPGFDLGNSPSEISPGMVMDKIMLIKTTNGTRVLEDISSDNRV CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCCCCE YIGALVNSCAVVEEVKKKEKDVYLVCAGTRGKFSLEDFFAAGRFSSLLMNEGWNGGDLEF EEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH AAARIFEDNSSYQETINLFHHSQNGQNLRELGYKEDIKFAARRDIFSIVPYWDGIKIRIS EEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCEEEECCCCCCEEEEEE RR CC >Mature Secondary Structure PDIYITLTPDELKNIPDKGVIVVVIDTLRASTTIVTALANGARKVIPFATSSKLQEYYR CCEEEEECHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH KNPSAHYMLCGEKGGEKIPGFDLGNSPSEISPGMVMDKIMLIKTTNGTRVLEDISSDNRV CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHCCCCCCE YIGALVNSCAVVEEVKKKEKDVYLVCAGTRGKFSLEDFFAAGRFSSLLMNEGWNGGDLEF EEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH AAARIFEDNSSYQETINLFHHSQNGQNLRELGYKEDIKFAARRDIFSIVPYWDGIKIRIS EEEEEECCCCHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCEEEECCCCCCEEEEEE RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]