| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yabG [H]
Identifier: 220933003
GI number: 220933003
Start: 2362691
End: 2363500
Strand: Reverse
Name: yabG [H]
Synonym: Hore_21700
Alternate gene names: 220933003
Gene position: 2363500-2362691 (Counterclockwise)
Preceding gene: 220933004
Following gene: 220933002
Centisome position: 91.67
GC content: 38.64
Gene sequence:
>810_bases ATGTCCTTAAATAAAGGAGATTTTGTTACCCGTCGTTCCCATAACAGGGATCTTGTTTTTCGTATTGAAGATATTAAGAG GGATAAGGTGATTTTGAGGAGTTTCAAATTTAGATTGATGGCCGATGCCCCTCTAGATGATTTAATAAAAGTTGATACAG GTAAGATAACCAGGATCAAAAAAAACCTTCACGAAGAAGCCCTGGAAATTCTCCAGAAATGTAGAAAGCATTTGATTCTT AATACCAGAGTTTTTAGAAACAGTAATAGTGATGCCGTTTATACAGAATACCCTGTCAGGGTCCTGCATCTTGATGGGGA TAAAGAGTACCTGAATATATCCCTCCAGAATTATAAAAATTTGGGTTTAAAGGCCCGGGGATTTTTTATCCCGGAAGAAG GCCAACCGGAAAAAATTTCCCGTTATGTAACTAAATATCGGCCTGATATTCTTGTATTAACCGGACATGATGGCGAATTT GGTGATAAAATTTATCATACTTCCCGGTACTTTATTAAAGCTGTAAAAATAGCCCGTAAAATCGAACCGGATCTCGACCA ATTAATAATTTATGCCGGTGCCTGTCAGTCTGATTACGATAAATTAATTGAAAGCGGGGCTAATTTTGCCAGTTCACCCC AAAATAAGATGATCCATTTCATGGAACCGGTTTTACTGGTGGAAAAAATAGCTTCAACCCCATTTAACACAGTTGTTCCA GTATCAGAAGTTACTGCCAATAGCATCAGTGGTGAAGGAGCTATTGGTGGTGTAGAAACCCGCGGCAAGCTCAGGAAAAA ATACCCGTAA
Upstream 100 bases:
>100_bases CAGATAAATACACCAAATAAACGAAAATGGCACAACAGCATATCCTGCCTCATATTCTAATTATATAGTATATACTTATT GAGAGGCAGGGTTTAAAATA
Downstream 100 bases:
>100_bases TTTTTTTTAAAATAAAATCTTGACAGTTTGCTAAAGGTTTGGTATACTATACTTTCATTTGACTAAAATTTTCTCTATGT GTTATAATATGGATAGTGAA
Product: peptidase U57 YabG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSLNKGDFVTRRSHNRDLVFRIEDIKRDKVILRSFKFRLMADAPLDDLIKVDTGKITRIKKNLHEEALEILQKCRKHLIL NTRVFRNSNSDAVYTEYPVRVLHLDGDKEYLNISLQNYKNLGLKARGFFIPEEGQPEKISRYVTKYRPDILVLTGHDGEF GDKIYHTSRYFIKAVKIARKIEPDLDQLIIYAGACQSDYDKLIESGANFASSPQNKMIHFMEPVLLVEKIASTPFNTVVP VSEVTANSISGEGAIGGVETRGKLRKKYP
Sequences:
>Translated_269_residues MSLNKGDFVTRRSHNRDLVFRIEDIKRDKVILRSFKFRLMADAPLDDLIKVDTGKITRIKKNLHEEALEILQKCRKHLIL NTRVFRNSNSDAVYTEYPVRVLHLDGDKEYLNISLQNYKNLGLKARGFFIPEEGQPEKISRYVTKYRPDILVLTGHDGEF GDKIYHTSRYFIKAVKIARKIEPDLDQLIIYAGACQSDYDKLIESGANFASSPQNKMIHFMEPVLLVEKIASTPFNTVVP VSEVTANSISGEGAIGGVETRGKLRKKYP >Mature_268_residues SLNKGDFVTRRSHNRDLVFRIEDIKRDKVILRSFKFRLMADAPLDDLIKVDTGKITRIKKNLHEEALEILQKCRKHLILN TRVFRNSNSDAVYTEYPVRVLHLDGDKEYLNISLQNYKNLGLKARGFFIPEEGQPEKISRYVTKYRPDILVLTGHDGEFG DKIYHTSRYFIKAVKIARKIEPDLDQLIIYAGACQSDYDKLIESGANFASSPQNKMIHFMEPVLLVEKIASTPFNTVVPV SEVTANSISGEGAIGGVETRGKLRKKYP
Specific function: Cleaves the spore coat proteins spoIVA and safA. May cooperate with tgl to mediate the temperature-dependent cross- linking of coat proteins like gerQ [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane. Note=Synthesized in the mother cell compartment and assembled on the surface of the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase U57 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008764 - ProDom: PD127708 [H]
Pfam domain/function: PF05582 Peptidase_U57 [H]
EC number: NA
Molecular weight: Translated: 30760; Mature: 30629
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNKGDFVTRRSHNRDLVFRIEDIKRDKVILRSFKFRLMADAPLDDLIKVDTGKITRIK CCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEECCCHHHHEECCCCHHHHHH KNLHEEALEILQKCRKHLILNTRVFRNSNSDAVYTEYPVRVLHLDGDKEYLNISLQNYKN HHHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECCEEEEEECCCCEEEEEEEHHHCC LGLKARGFFIPEEGQPEKISRYVTKYRPDILVLTGHDGEFGDKIYHTSRYFIKAVKIARK CCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH IEPDLDQLIIYAGACQSDYDKLIESGANFASSPQNKMIHFMEPVLLVEKIASTPFNTVVP CCCCHHHEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VSEVTANSISGEGAIGGVETRGKLRKKYP HHHHHHCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure SLNKGDFVTRRSHNRDLVFRIEDIKRDKVILRSFKFRLMADAPLDDLIKVDTGKITRIK CCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHEEEECCCHHHHEECCCCHHHHHH KNLHEEALEILQKCRKHLILNTRVFRNSNSDAVYTEYPVRVLHLDGDKEYLNISLQNYKN HHHHHHHHHHHHHHHHHHEECCEEEECCCCCEEEEECCEEEEEECCCCEEEEEEEHHHCC LGLKARGFFIPEEGQPEKISRYVTKYRPDILVLTGHDGEFGDKIYHTSRYFIKAVKIARK CCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH IEPDLDQLIIYAGACQSDYDKLIESGANFASSPQNKMIHFMEPVLLVEKIASTPFNTVVP CCCCHHHEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VSEVTANSISGEGAIGGVETRGKLRKKYP HHHHHHCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]