| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is phoU [H]
Identifier: 220932986
GI number: 220932986
Start: 2345450
End: 2346097
Strand: Reverse
Name: phoU [H]
Synonym: Hore_21540
Alternate gene names: 220932986
Gene position: 2346097-2345450 (Counterclockwise)
Preceding gene: 220932987
Following gene: 220932984
Centisome position: 91.0
GC content: 39.66
Gene sequence:
>648_bases GTGCGTAAAAGCTTTCATGAGTCTATTAAGGAATTAAAGAATGAAATGTTAAAAATGGGGAGTATGGTCGAAGAAGCTAT CCATGATAGTGTTAAAGCCCTTAAAGAACAGGATTTAGACCTGGCCACCCAGGTGATGGATGGGGATGACAAAATAGATG ATTTTGAGGTAGAACTGGAAGAGAGATGTACCAGGTTAATTGCCCTGCAACAGCCAGTTGCCAAAGATTTACGTACTATT ATAGTGATCTCTAAACTGGCTACTGATTTAGAAAGAATTGGTGATCATGCCAGTAATATTGCCAGAATGGTCCATCAAAT TGGAAAAGAACCTCTCATTAAACCCTTAATTGATATTCCCCGGATGACAGAAATTGTAACCAGGCGACTCCGGGAAAGCC TTGATGCCTTTGTTAATCTGGATATAGAGCTGGCCAAAAAGGTTGCCCGGGAGGATGAAGAGGTAGATATTCTTGATGAA CAGATTTTAAGGGAGCTTTTAACCTTTATGATTGAGGATCCCTCCAAAATAAGGCAGGCTACTTCCCTTATGTTTGTAAG CAGATTTTTAGAAAGAATCGGAGACCACTCCACAAATATTTGTGAACGTGTTATTTATATGGTGAGTGGAGAAAGGAAAG CTTATTAG
Upstream 100 bases:
>100_bases TTGATGAGACAGACATTATTTTTGAAAACCCATCTGACCAGAGGACAGAGGACTATATTACCGGTCGTTTTGGATAATAT TATAAAAGAGGGTGATTTTT
Downstream 100 bases:
>100_bases TTAAGGAATTGTTAATTTAATAAGGAAAAAAAGGATTATCGGGTAATACAACATACAACAAAATAAGTGCGATTGTAATT GCTATAAATTATAATTTTCA
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRKSFHESIKELKNEMLKMGSMVEEAIHDSVKALKEQDLDLATQVMDGDDKIDDFEVELEERCTRLIALQQPVAKDLRTI IVISKLATDLERIGDHASNIARMVHQIGKEPLIKPLIDIPRMTEIVTRRLRESLDAFVNLDIELAKKVAREDEEVDILDE QILRELLTFMIEDPSKIRQATSLMFVSRFLERIGDHSTNICERVIYMVSGERKAY
Sequences:
>Translated_215_residues MRKSFHESIKELKNEMLKMGSMVEEAIHDSVKALKEQDLDLATQVMDGDDKIDDFEVELEERCTRLIALQQPVAKDLRTI IVISKLATDLERIGDHASNIARMVHQIGKEPLIKPLIDIPRMTEIVTRRLRESLDAFVNLDIELAKKVAREDEEVDILDE QILRELLTFMIEDPSKIRQATSLMFVSRFLERIGDHSTNICERVIYMVSGERKAY >Mature_215_residues MRKSFHESIKELKNEMLKMGSMVEEAIHDSVKALKEQDLDLATQVMDGDDKIDDFEVELEERCTRLIALQQPVAKDLRTI IVISKLATDLERIGDHASNIARMVHQIGKEPLIKPLIDIPRMTEIVTRRLRESLDAFVNLDIELAKKVAREDEEVDILDE QILRELLTFMIEDPSKIRQATSLMFVSRFLERIGDHSTNICERVIYMVSGERKAY
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=214, Percent_Identity=39.7196261682243, Blast_Score=156, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24835; Mature: 24835
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSFHESIKELKNEMLKMGSMVEEAIHDSVKALKEQDLDLATQVMDGDDKIDDFEVELE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERCTRLIALQQPVAKDLRTIIVISKLATDLERIGDHASNIARMVHQIGKEPLIKPLIDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RMTEIVTRRLRESLDAFVNLDIELAKKVAREDEEVDILDEQILRELLTFMIEDPSKIRQA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH TSLMFVSRFLERIGDHSTNICERVIYMVSGERKAY HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRKSFHESIKELKNEMLKMGSMVEEAIHDSVKALKEQDLDLATQVMDGDDKIDDFEVELE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ERCTRLIALQQPVAKDLRTIIVISKLATDLERIGDHASNIARMVHQIGKEPLIKPLIDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RMTEIVTRRLRESLDAFVNLDIELAKKVAREDEEVDILDEQILRELLTFMIEDPSKIRQA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH TSLMFVSRFLERIGDHSTNICERVIYMVSGERKAY HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]