| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932957
Identifier: 220932957
GI number: 220932957
Start: 2314936
End: 2315856
Strand: Reverse
Name: 220932957
Synonym: Hore_21250
Alternate gene names: NA
Gene position: 2315856-2314936 (Counterclockwise)
Preceding gene: 220932958
Following gene: 220932956
Centisome position: 89.83
GC content: 34.2
Gene sequence:
>921_bases TTGACAAAACAGGTTTTCTCTGTTATACTTCTTACGGTTAAGGTTATATTTAAAATAGAGGGAAGTTATATGAAACCATA TTTAGTTCCAGAAGACCTTTACCAGCATAAGCTTGCCGTTATTTTAGGCCGTGGTAAGAGGTTAAAAAAAATATTACAAC ATTATCCAACTGAAAAGAAATTTAAACAGGCTTCAATCAAAGAGATTGCTTCTGTTCTGGGTATTAAAAATCTAGAATGT GGTATCATTAAAAAACTGAAGAAACTAGACAAAACCTATGACCGCCTGATTACCTTTTCATCTAATAAGAACTGGAGTAA AACTCCCGAAGCGAAAAAGGTTATGGGTATAGATACAGAATATTTAAAGAGCAACCTTGACTGTATCCAGTATGTGACCA TGGAAGGTTTTGAAGTGACTTCATGTGGTATGATTTTTACAAATAATGACCTGGCCCATTCAGTCAACCCTGAAGAGGGG ATTGATTATTTAAGAGAGGTTATTTATGATTTTGAGCCCGAAATAATTGTCGGGCATAATTTTAATTCTGATATAAAAGT AATGGAAAGGGCTTACGGTAGCCCTATACCGGAGCTATATAACTTTGATGATACTATGGAATTGATGAAAAGGAGCAATC TTGCCAATATTATCGGTGGTTCAAGCTTAAATAAGGCCATTAAGCGGGTTTTTAAACAGGATGTTATCGGCCTTTTTAGT GCTTATAAAGATATTAATTTACTTGTTGAATATGGAATCAAAGATGCTCTCTTTCCACTTTTGATCCGGTATTATACAAT TAATGGTAGTTTGCCCGCTATGTCAATTGGCCTTAAAATACAACACCTTATTAAGGAAAAGAACAGGGAAATTATTAATA ATGATTCTTTTACAATTAATCTGGAAAAGGTAGGGGGCTGA
Upstream 100 bases:
>100_bases TTCTGGACAAGTATGAACAGGAGATAGCCTGAGTTGATGACTGAAAAACGGCGGAATTTGCTTCCGCCGTTTTTATATGG TAAATATAAAGGGTTAAACC
Downstream 100 bases:
>100_bases ATTGATGGAATCTCAGGTATTAACTATAATTCTCGCCGCCGGCAAAGGAACAAGAATGAAATCCGGGCTGGCTAAAGTTT TGCATCCTGTTGCTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTKQVFSVILLTVKVIFKIEGSYMKPYLVPEDLYQHKLAVILGRGKRLKKILQHYPTEKKFKQASIKEIASVLGIKNLEC GIIKKLKKLDKTYDRLITFSSNKNWSKTPEAKKVMGIDTEYLKSNLDCIQYVTMEGFEVTSCGMIFTNNDLAHSVNPEEG IDYLREVIYDFEPEIIVGHNFNSDIKVMERAYGSPIPELYNFDDTMELMKRSNLANIIGGSSLNKAIKRVFKQDVIGLFS AYKDINLLVEYGIKDALFPLLIRYYTINGSLPAMSIGLKIQHLIKEKNREIINNDSFTINLEKVGG
Sequences:
>Translated_306_residues MTKQVFSVILLTVKVIFKIEGSYMKPYLVPEDLYQHKLAVILGRGKRLKKILQHYPTEKKFKQASIKEIASVLGIKNLEC GIIKKLKKLDKTYDRLITFSSNKNWSKTPEAKKVMGIDTEYLKSNLDCIQYVTMEGFEVTSCGMIFTNNDLAHSVNPEEG IDYLREVIYDFEPEIIVGHNFNSDIKVMERAYGSPIPELYNFDDTMELMKRSNLANIIGGSSLNKAIKRVFKQDVIGLFS AYKDINLLVEYGIKDALFPLLIRYYTINGSLPAMSIGLKIQHLIKEKNREIINNDSFTINLEKVGG >Mature_305_residues TKQVFSVILLTVKVIFKIEGSYMKPYLVPEDLYQHKLAVILGRGKRLKKILQHYPTEKKFKQASIKEIASVLGIKNLECG IIKKLKKLDKTYDRLITFSSNKNWSKTPEAKKVMGIDTEYLKSNLDCIQYVTMEGFEVTSCGMIFTNNDLAHSVNPEEGI DYLREVIYDFEPEIIVGHNFNSDIKVMERAYGSPIPELYNFDDTMELMKRSNLANIIGGSSLNKAIKRVFKQDVIGLFSA YKDINLLVEYGIKDALFPLLIRYYTINGSLPAMSIGLKIQHLIKEKNREIINNDSFTINLEKVGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34953; Mature: 34822
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQVFSVILLTVKVIFKIEGSYMKPYLVPEDLYQHKLAVILGRGKRLKKILQHYPTEKK CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH FKQASIKEIASVLGIKNLECGIIKKLKKLDKTYDRLITFSSNKNWSKTPEAKKVMGIDTE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCHH YLKSNLDCIQYVTMEGFEVTSCGMIFTNNDLAHSVNPEEGIDYLREVIYDFEPEIIVGHN HHHCCCHHHHHHHHCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC FNSDIKVMERAYGSPIPELYNFDDTMELMKRSNLANIIGGSSLNKAIKRVFKQDVIGLFS CCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHH AYKDINLLVEYGIKDALFPLLIRYYTINGSLPAMSIGLKIQHLIKEKNREIINNDSFTIN HHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCEEEE LEKVGG EEECCC >Mature Secondary Structure TKQVFSVILLTVKVIFKIEGSYMKPYLVPEDLYQHKLAVILGRGKRLKKILQHYPTEKK CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH FKQASIKEIASVLGIKNLECGIIKKLKKLDKTYDRLITFSSNKNWSKTPEAKKVMGIDTE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHCCCHH YLKSNLDCIQYVTMEGFEVTSCGMIFTNNDLAHSVNPEEGIDYLREVIYDFEPEIIVGHN HHHCCCHHHHHHHHCCEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC FNSDIKVMERAYGSPIPELYNFDDTMELMKRSNLANIIGGSSLNKAIKRVFKQDVIGLFS CCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHH AYKDINLLVEYGIKDALFPLLIRYYTINGSLPAMSIGLKIQHLIKEKNREIINNDSFTIN HHHHHHHHHHHCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCHHCCCCCEEEE LEKVGG EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA