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The map label for this gene is ybhJ [H]

Identifier: 220932937

GI number: 220932937

Start: 2282678

End: 2285023

Strand: Reverse

Name: ybhJ [H]

Synonym: Hore_21050

Alternate gene names: 220932937

Gene position: 2285023-2282678 (Counterclockwise)

Preceding gene: 220932938

Following gene: 220932936

Centisome position: 88.63

GC content: 43.73

Gene sequence:

>2346_bases
TTGATTAAACTTAAAAAAAAGGGTGCTTATTTAATTAAAGGAAGGATTATCAGGGATAGTCTTAAGGATTTAAAATCCAT
TAATAAGGAACTGGAAAAAGCAAATCAATCTCCTTTATCTGATACTAATTTAGATGGTCTAAATCCTGAGGTGGCCCGGA
ATAATACGATGGCTTATCAAATCCTGATAGATCATGATACCGGAAGTGGTGATGAAACCCTTAATATTAAATTTGATGCT
ATGGCTTCACATGATATCACCTATGTCGGTATTATCCAGACGGCAAAGGCCAGTGGATTAAAGGAATTTCCGCTACCATA
TGTCCTGACAAACTGTCATAACAGCCTGTGTGCTGTCGGGGGTACTATTAACGAGGATGACCATGTTTTTGGTCTTACGG
CAGCTCGAAAATTCGGGGGATACTATGTTCCTGCTCACCTGGCGGTTATTCATCAATATATGCGGGAAATGATGACAGGG
TGTGGCAAGATGATTCTGGGGTCTGACAGTCATACCAGGTATGGTGCCCTGGGAACGATGGGAATAGGTGAAGGTGGCCC
CGAACTTGTGAAACAGCTCCTGAACAGGACCTATGATATTCCCCGTCCTGAGGTTATCTGTGTCTATTTAACCGGGAAGC
CCCGTAAGGGAGTGGGGCCACAGGATGTTGCCCTGGCCATAATCGGGGAGGTTTTTTCATCAGGTTTTGTCAAAAATAAG
GTTATGGAATTTGTTGGTCCCGGAATAGAGGAACTCTCCATTGATTACAGAAATGGTATCGATGTCATGACTACTGAAAC
TTCCTGTTTAAGTTCTATCTGGTCTACAGATGACAGGGTCAGGGAATACTACAAAATTCACGGTAGGGAGAATGAGTATC
AGGAGTTGAAGCCCGGTGAAGTCGCTTATTATGATGGTTTTATCATTGTAGATTTAAGTAAGATTGAACCCATGATTGCC
CTTCCCTTCCATCCAAGCAATGTTTATAAAATATCTGAATTAAATAATAACCCCCATGATATCCTGAGTAAGGTAGAGAA
CGATGTTGCTAAACAGCTGACTAATGTCAGTGTTAAAGGGCGGTTAACAGGCAAAATAGTTGACGGCAGGGTCAAAGTAG
ACCAGGGGGTTGTGGCCGGTTGTTCTGGAGGGACATATGAGAATATTGCGGTTATGGCGAAGATGCTGGAGTCAGGGTCA
ATCGGCAATGGTCCTTTTTCTCTCAGTGTTTACCCGGCCAGTCAACCAGTTAATATAGAGTTAAACAGGAATGGTTATAT
AAATAAATTAATGGAAGCCGGTGTAATTACCAGGACTGCATTTTGCGGGCCCTGTTTTGGGGCAGGGGATGTTCCTGCCA
ACAATGGTTTCAGTATTCGACATACAACTCGTAATTTCCCGAACCGGGAAGGGTCAAAACCAGGTGAAGGTCAGATTGCC
TGGGTAGGTTTGATGGATACCCGCTCTATTGCAGCCACTGCTCTAAATGGTGGTATATTAACACCCGCTACGGAAATAGA
TATTCCTGAGGTTGACCCGGGTTATCATTTTGATAAGGGGATTTATGAAAAACGTGTTTATGCCGGTTACGGCAAGCCAG
ATCCGCAAAAAGAATTAAAATACGGGCCGAATATAAAGGACTGGCCCCAGATGATTTCATTACCGGACAACTTATTGCTC
CAGATAGCATCGGTTATAGATGACCCGGTGACCACGACCGATGAATTAATTCCTTCAGGGGAGACATCTTCATACCGGTC
TAACCCCATCAGGCTGGCTGAGTTTACTCTCTACAGAAAGGATCCCGGTTATGTAAACAGGGCCAAAAAGATTCAGGGAA
TTGAAAAACTGAGATTAAGGGCTCTGGAAGACGGGAATCTTGATATGGATGAACTTAAAAACCTCTATAACCTGGTTAAC
CCTGAGATTAATTACCGGGACTGGGTTAAAAAGACGTCATTCGGCAGTGTTATTTATGCCAATAAACCCGGTGATGGTTC
AGCCCGGGAACAGGCTGCTTCCTGTCAGAAGGTACTGGGTGGCTGGGCCAATATAGCCCTGGAGTATGCCACCAAGCGTT
ATCGCAGTAATGTTATTAACTGGGGAATGGTGCCCTTTACCATTGATGCTGACGAAAAGGATAAGATAAAGAAAGAGGCC
TATCTCTACTTGCCCCAGATCCGCCAGAAGCTCGCAGATGGTAATGAATCAATAACTGGGTATATTATAGATGGTGCTCA
CAGGGTTGATATTAAATTAAAAATAAAGAACCTCAGCCCGGATCAGCGGCAGGTTATCCTGGATGGGTGTTTGATTAATT
ACTACCGCAAAAGCAGGACAGAGTAA

Upstream 100 bases:

>100_bases
AACCCTACCCGGGGGAGTGGGGTTTGAAGATGTTTTTGTACAGGTATAAAAAAATAAAATATAAAAAAATAAAGAAGTGA
GTATGAAGGAGGTAGTTATT

Downstream 100 bases:

>100_bases
GGTAAAAAAGAGAAGAATAGATTAAGGTTATTAAAGAAGAGAAAAATTATAATATACTTTTAAATATTCGGTATCCCTCT
GATATTTTCCGGTATGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MIKLKKKGAYLIKGRIIRDSLKDLKSINKELEKANQSPLSDTNLDGLNPEVARNNTMAYQILIDHDTGSGDETLNIKFDA
MASHDITYVGIIQTAKASGLKEFPLPYVLTNCHNSLCAVGGTINEDDHVFGLTAARKFGGYYVPAHLAVIHQYMREMMTG
CGKMILGSDSHTRYGALGTMGIGEGGPELVKQLLNRTYDIPRPEVICVYLTGKPRKGVGPQDVALAIIGEVFSSGFVKNK
VMEFVGPGIEELSIDYRNGIDVMTTETSCLSSIWSTDDRVREYYKIHGRENEYQELKPGEVAYYDGFIIVDLSKIEPMIA
LPFHPSNVYKISELNNNPHDILSKVENDVAKQLTNVSVKGRLTGKIVDGRVKVDQGVVAGCSGGTYENIAVMAKMLESGS
IGNGPFSLSVYPASQPVNIELNRNGYINKLMEAGVITRTAFCGPCFGAGDVPANNGFSIRHTTRNFPNREGSKPGEGQIA
WVGLMDTRSIAATALNGGILTPATEIDIPEVDPGYHFDKGIYEKRVYAGYGKPDPQKELKYGPNIKDWPQMISLPDNLLL
QIASVIDDPVTTTDELIPSGETSSYRSNPIRLAEFTLYRKDPGYVNRAKKIQGIEKLRLRALEDGNLDMDELKNLYNLVN
PEINYRDWVKKTSFGSVIYANKPGDGSAREQAASCQKVLGGWANIALEYATKRYRSNVINWGMVPFTIDADEKDKIKKEA
YLYLPQIRQKLADGNESITGYIIDGAHRVDIKLKIKNLSPDQRQVILDGCLINYYRKSRTE

Sequences:

>Translated_781_residues
MIKLKKKGAYLIKGRIIRDSLKDLKSINKELEKANQSPLSDTNLDGLNPEVARNNTMAYQILIDHDTGSGDETLNIKFDA
MASHDITYVGIIQTAKASGLKEFPLPYVLTNCHNSLCAVGGTINEDDHVFGLTAARKFGGYYVPAHLAVIHQYMREMMTG
CGKMILGSDSHTRYGALGTMGIGEGGPELVKQLLNRTYDIPRPEVICVYLTGKPRKGVGPQDVALAIIGEVFSSGFVKNK
VMEFVGPGIEELSIDYRNGIDVMTTETSCLSSIWSTDDRVREYYKIHGRENEYQELKPGEVAYYDGFIIVDLSKIEPMIA
LPFHPSNVYKISELNNNPHDILSKVENDVAKQLTNVSVKGRLTGKIVDGRVKVDQGVVAGCSGGTYENIAVMAKMLESGS
IGNGPFSLSVYPASQPVNIELNRNGYINKLMEAGVITRTAFCGPCFGAGDVPANNGFSIRHTTRNFPNREGSKPGEGQIA
WVGLMDTRSIAATALNGGILTPATEIDIPEVDPGYHFDKGIYEKRVYAGYGKPDPQKELKYGPNIKDWPQMISLPDNLLL
QIASVIDDPVTTTDELIPSGETSSYRSNPIRLAEFTLYRKDPGYVNRAKKIQGIEKLRLRALEDGNLDMDELKNLYNLVN
PEINYRDWVKKTSFGSVIYANKPGDGSAREQAASCQKVLGGWANIALEYATKRYRSNVINWGMVPFTIDADEKDKIKKEA
YLYLPQIRQKLADGNESITGYIIDGAHRVDIKLKIKNLSPDQRQVILDGCLINYYRKSRTE
>Mature_781_residues
MIKLKKKGAYLIKGRIIRDSLKDLKSINKELEKANQSPLSDTNLDGLNPEVARNNTMAYQILIDHDTGSGDETLNIKFDA
MASHDITYVGIIQTAKASGLKEFPLPYVLTNCHNSLCAVGGTINEDDHVFGLTAARKFGGYYVPAHLAVIHQYMREMMTG
CGKMILGSDSHTRYGALGTMGIGEGGPELVKQLLNRTYDIPRPEVICVYLTGKPRKGVGPQDVALAIIGEVFSSGFVKNK
VMEFVGPGIEELSIDYRNGIDVMTTETSCLSSIWSTDDRVREYYKIHGRENEYQELKPGEVAYYDGFIIVDLSKIEPMIA
LPFHPSNVYKISELNNNPHDILSKVENDVAKQLTNVSVKGRLTGKIVDGRVKVDQGVVAGCSGGTYENIAVMAKMLESGS
IGNGPFSLSVYPASQPVNIELNRNGYINKLMEAGVITRTAFCGPCFGAGDVPANNGFSIRHTTRNFPNREGSKPGEGQIA
WVGLMDTRSIAATALNGGILTPATEIDIPEVDPGYHFDKGIYEKRVYAGYGKPDPQKELKYGPNIKDWPQMISLPDNLLL
QIASVIDDPVTTTDELIPSGETSSYRSNPIRLAEFTLYRKDPGYVNRAKKIQGIEKLRLRALEDGNLDMDELKNLYNLVN
PEINYRDWVKKTSFGSVIYANKPGDGSAREQAASCQKVLGGWANIALEYATKRYRSNVINWGMVPFTIDADEKDKIKKEA
YLYLPQIRQKLADGNESITGYIIDGAHRVDIKLKIKNLSPDQRQVILDGCLINYYRKSRTE

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=468, Percent_Identity=26.4957264957265, Blast_Score=114, Evalue=3e-25,
Organism=Escherichia coli, GI87081781, Length=783, Percent_Identity=56.066411238825, Blast_Score=868, Evalue=0.0,
Organism=Escherichia coli, GI1786259, Length=323, Percent_Identity=25.6965944272446, Blast_Score=93, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI25149337, Length=705, Percent_Identity=23.8297872340426, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32564738, Length=652, Percent_Identity=23.9263803680982, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI25149342, Length=541, Percent_Identity=22.735674676525, Blast_Score=75, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322261, Length=811, Percent_Identity=24.4143033292232, Blast_Score=130, Evalue=8e-31,
Organism=Saccharomyces cerevisiae, GI6323335, Length=773, Percent_Identity=23.8033635187581, Blast_Score=127, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6320440, Length=362, Percent_Identity=28.1767955801105, Blast_Score=85, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321429, Length=357, Percent_Identity=23.8095238095238, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI28571643, Length=466, Percent_Identity=25.1072961373391, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI281365315, Length=734, Percent_Identity=23.7057220708447, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17864292, Length=734, Percent_Identity=23.7057220708447, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI161076999, Length=686, Percent_Identity=23.9067055393586, Blast_Score=98, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 86416; Mature: 86416

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLKKKGAYLIKGRIIRDSLKDLKSINKELEKANQSPLSDTNLDGLNPEVARNNTMAYQ
CEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEE
ILIDHDTGSGDETLNIKFDAMASHDITYVGIIQTAKASGLKEFPLPYVLTNCHNSLCAVG
EEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEECC
GTINEDDHVFGLTAARKFGGYYVPAHLAVIHQYMREMMTGCGKMILGSDSHTRYGALGTM
CCCCCCCCEEEEHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEC
GIGEGGPELVKQLLNRTYDIPRPEVICVYLTGKPRKGVGPQDVALAIIGEVFSSGFVKNK
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHH
VMEFVGPGIEELSIDYRNGIDVMTTETSCLSSIWSTDDRVREYYKIHGRENEYQELKPGE
HHHHHCCCHHHEEEECCCCCEEEEECHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCC
VAYYDGFIIVDLSKIEPMIALPFHPSNVYKISELNNNPHDILSKVENDVAKQLTNVSVKG
EEEECCEEEEEHHHCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE
RLTGKIVDGRVKVDQGVVAGCSGGTYENIAVMAKMLESGSIGNGPFSLSVYPASQPVNIE
EEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEE
LNRNGYINKLMEAGVITRTAFCGPCFGAGDVPANNGFSIRHTTRNFPNREGSKPGEGQIA
ECCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEE
WVGLMDTRSIAATALNGGILTPATEIDIPEVDPGYHFDKGIYEKRVYAGYGKPDPQKELK
EEEECCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHC
YGPNIKDWPQMISLPDNLLLQIASVIDDPVTTTDELIPSGETSSYRSNPIRLAEFTLYRK
CCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEC
DPGYVNRAKKIQGIEKLRLRALEDGNLDMDELKNLYNLVNPEINYRDWVKKTSFGSVIYA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE
NKPGDGSAREQAASCQKVLGGWANIALEYATKRYRSNVINWGMVPFTIDADEKDKIKKEA
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
YLYLPQIRQKLADGNESITGYIIDGAHRVDIKLKIKNLSPDQRQVILDGCLINYYRKSRT
HEECHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
E
C
>Mature Secondary Structure
MIKLKKKGAYLIKGRIIRDSLKDLKSINKELEKANQSPLSDTNLDGLNPEVARNNTMAYQ
CEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCEEEE
ILIDHDTGSGDETLNIKFDAMASHDITYVGIIQTAKASGLKEFPLPYVLTNCHNSLCAVG
EEEECCCCCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHCCCCCEECC
GTINEDDHVFGLTAARKFGGYYVPAHLAVIHQYMREMMTGCGKMILGSDSHTRYGALGTM
CCCCCCCCEEEEHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEC
GIGEGGPELVKQLLNRTYDIPRPEVICVYLTGKPRKGVGPQDVALAIIGEVFSSGFVKNK
CCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHH
VMEFVGPGIEELSIDYRNGIDVMTTETSCLSSIWSTDDRVREYYKIHGRENEYQELKPGE
HHHHHCCCHHHEEEECCCCCEEEEECHHHHHHHHCCHHHHHHHHHHCCCCCCHHHCCCCC
VAYYDGFIIVDLSKIEPMIALPFHPSNVYKISELNNNPHDILSKVENDVAKQLTNVSVKG
EEEECCEEEEEHHHCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE
RLTGKIVDGRVKVDQGVVAGCSGGTYENIAVMAKMLESGSIGNGPFSLSVYPASQPVNIE
EEEEEEECCEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEE
LNRNGYINKLMEAGVITRTAFCGPCFGAGDVPANNGFSIRHTTRNFPNREGSKPGEGQIA
ECCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEE
WVGLMDTRSIAATALNGGILTPATEIDIPEVDPGYHFDKGIYEKRVYAGYGKPDPQKELK
EEEECCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHC
YGPNIKDWPQMISLPDNLLLQIASVIDDPVTTTDELIPSGETSSYRSNPIRLAEFTLYRK
CCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEC
DPGYVNRAKKIQGIEKLRLRALEDGNLDMDELKNLYNLVNPEINYRDWVKKTSFGSVIYA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE
NKPGDGSAREQAASCQKVLGGWANIALEYATKRYRSNVINWGMVPFTIDADEKDKIKKEA
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH
YLYLPQIRQKLADGNESITGYIIDGAHRVDIKLKIKNLSPDQRQVILDGCLINYYRKSRT
HEECHHHHHHHCCCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]