Click here to switch to the map view.

The map label for this gene is 220932919

Identifier: 220932919

GI number: 220932919

Start: 2260408

End: 2261700

Strand: Reverse

Name: 220932919

Synonym: Hore_20870

Alternate gene names: NA

Gene position: 2261700-2260408 (Counterclockwise)

Preceding gene: 220932920

Following gene: 220932918

Centisome position: 87.73

GC content: 42.92

Gene sequence:

>1293_bases
ATGAAAAAAGGGTTATCTTTAATACTTGTTATTTCATTAATGCTGGTATTAAGTAGTGTTGTTTTTGCAGAAGAACAGGT
TGAAATTACAATTGCTGGTGGTAGTGTAGGTATCGAGCTCGACCTGACCAAAGAAGCAGCTCAATTATATATGGAAAGAC
ACCCCAATGTAAAGGTTAATGTACTGGACACACCTGATTTAGCCAATGACAGGCTCGGGTTATATCTTCAGTTTTTGGAA
GCAAAAAGCCCCAAAATTGACGTCTACCAGATTGATGTTATCTGGCCCGGGGATTTAGCTGAACATTTTGTTGATCTTTA
TGAGTATGGGGCTGAAAAATATGTTGATGATCACTTCCAGCCTATTGTAGAAAATAATACTGTTGAGGGCAGACTGGTAG
CTATGCCCTGGTTTACTGATGCCGGTCTTCTTTACTACCGTAAGGATCTTCTTGAAAAATATGACCTGGAAGTCCCCAAA
ACATGGGAAGAATTAGAAAGGGCGGCCAAGATTATTCAGACCGGAGAAAGGGCTGCCGGAAACCAGGACTTCTGGGGTTA
TATCTGGCAGGGTAATGCTTATGAAGGTTTAACATGTGATGCCTTAGAATGGGTTGCCTCCAATGGTGGAGGAACTATTA
TCAGTCCTGACAAAAAAATTACTATTAACAATGAAAAGGCAATAGAAGCCATCGAAATGGCCGCTGACTGGGTAGGCTGG
ATTTCTCCTCCAGGAACAACTGGTCTTGTTGAAGAAAGCACCCGTAAGATGTGGGAAGCAGGTAATGCCGCCTTTATGAG
AAACTGGCCTTACTGTTATAAACTTGGTAATGCTGAAGGGTCTGCCATCAAAGGCAAGTTTGATGTAGCTCCCCTACCGG
CCGGTGATAGTGGTAACGGGGCTGCTACCCTCGGTGGTTGGAACCTGGCTGTAAGCAAGTACAGTGAACACCCTGAAGTT
GCCGCTGATTTTGTTTTCTTCCTGACCGGTTATGAAATTCAGAAACTCCGGGCTACCAAAGGTTCCTTTAATCCGACCAT
TAAAGCCCTTTATGAAGATGAAGAAGTCCTGGAAGCTAACCCCTTCTTTGGTAAGCTTTATGATGTTTTTGTAAATGCTG
TTGCCCGTCCTTCTACTGCCACTGCTCCTAACTATAATGAAGTCTCCAGGTTATTCTTCCAGGCTGTACATTCAGTCCTT
TCTGGTGAAATGGATGCCAGGACTGCAGTGGAATACTTAGAATTAGATCTTCAGGATTTAACCGGTTTTGAAATTGGTGA
ACCTCAAAAATAA

Upstream 100 bases:

>100_bases
AAATGCATTTCGGGGAGGTGGTAGGTAAGAGGAGGTGATGACTGGCAATTGATTTTAATTAATAGTTAACTTTAAAAATT
ACTAAAGGGGGAGACAATTA

Downstream 100 bases:

>100_bases
AAAGAGATGCATTTAGACACAATAGTGAATTCAGGGGCCTCTTAAAAGGGGCCCCCCTACTTGCTATATAAAGGAGGTAT
ACTATGGCTAAATATGGCAG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKKGLSLILVISLMLVLSSVVFAEEQVEITIAGGSVGIELDLTKEAAQLYMERHPNVKVNVLDTPDLANDRLGLYLQFLE
AKSPKIDVYQIDVIWPGDLAEHFVDLYEYGAEKYVDDHFQPIVENNTVEGRLVAMPWFTDAGLLYYRKDLLEKYDLEVPK
TWEELERAAKIIQTGERAAGNQDFWGYIWQGNAYEGLTCDALEWVASNGGGTIISPDKKITINNEKAIEAIEMAADWVGW
ISPPGTTGLVEESTRKMWEAGNAAFMRNWPYCYKLGNAEGSAIKGKFDVAPLPAGDSGNGAATLGGWNLAVSKYSEHPEV
AADFVFFLTGYEIQKLRATKGSFNPTIKALYEDEEVLEANPFFGKLYDVFVNAVARPSTATAPNYNEVSRLFFQAVHSVL
SGEMDARTAVEYLELDLQDLTGFEIGEPQK

Sequences:

>Translated_430_residues
MKKGLSLILVISLMLVLSSVVFAEEQVEITIAGGSVGIELDLTKEAAQLYMERHPNVKVNVLDTPDLANDRLGLYLQFLE
AKSPKIDVYQIDVIWPGDLAEHFVDLYEYGAEKYVDDHFQPIVENNTVEGRLVAMPWFTDAGLLYYRKDLLEKYDLEVPK
TWEELERAAKIIQTGERAAGNQDFWGYIWQGNAYEGLTCDALEWVASNGGGTIISPDKKITINNEKAIEAIEMAADWVGW
ISPPGTTGLVEESTRKMWEAGNAAFMRNWPYCYKLGNAEGSAIKGKFDVAPLPAGDSGNGAATLGGWNLAVSKYSEHPEV
AADFVFFLTGYEIQKLRATKGSFNPTIKALYEDEEVLEANPFFGKLYDVFVNAVARPSTATAPNYNEVSRLFFQAVHSVL
SGEMDARTAVEYLELDLQDLTGFEIGEPQK
>Mature_430_residues
MKKGLSLILVISLMLVLSSVVFAEEQVEITIAGGSVGIELDLTKEAAQLYMERHPNVKVNVLDTPDLANDRLGLYLQFLE
AKSPKIDVYQIDVIWPGDLAEHFVDLYEYGAEKYVDDHFQPIVENNTVEGRLVAMPWFTDAGLLYYRKDLLEKYDLEVPK
TWEELERAAKIIQTGERAAGNQDFWGYIWQGNAYEGLTCDALEWVASNGGGTIISPDKKITINNEKAIEAIEMAADWVGW
ISPPGTTGLVEESTRKMWEAGNAAFMRNWPYCYKLGNAEGSAIKGKFDVAPLPAGDSGNGAATLGGWNLAVSKYSEHPEV
AADFVFFLTGYEIQKLRATKGSFNPTIKALYEDEEVLEANPFFGKLYDVFVNAVARPSTATAPNYNEVSRLFFQAVHSVL
SGEMDARTAVEYLELDLQDLTGFEIGEPQK

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47773; Mature: 47773

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00595 AA_TRANSFER_CLASS_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGLSLILVISLMLVLSSVVFAEEQVEITIAGGSVGIELDLTKEAAQLYMERHPNVKVN
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECHHHHHHHHHCCCCEEEE
VLDTPDLANDRLGLYLQFLEAKSPKIDVYQIDVIWPGDLAEHFVDLYEYGAEKYVDDHFQ
EECCCCCCCCCHHHHHEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCH
PIVENNTVEGRLVAMPWFTDAGLLYYRKDLLEKYDLEVPKTWEELERAAKIIQTGERAAG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
NQDFWGYIWQGNAYEGLTCDALEWVASNGGGTIISPDKKITINNEKAIEAIEMAADWVGW
CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCCEEEECCHHHHHHHHHHHHHHCC
ISPPGTTGLVEESTRKMWEAGNAAFMRNWPYCYKLGNAEGSAIKGKFDVAPLPAGDSGNG
CCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEECCCCEECCCCCCCCCC
AATLGGWNLAVSKYSEHPEVAADFVFFLTGYEIQKLRATKGSFNPTIKALYEDEEVLEAN
EEEECCCEEEECCCCCCCHHHHHHHHHHCCCHHEEHHHCCCCCCCCEEEEECCCHHHCCC
PFFGKLYDVFVNAVARPSTATAPNYNEVSRLFFQAVHSVLSGEMDARTAVEYLELDLQDL
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TGFEIGEPQK
CCCCCCCCCC
>Mature Secondary Structure
MKKGLSLILVISLMLVLSSVVFAEEQVEITIAGGSVGIELDLTKEAAQLYMERHPNVKVN
CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECHHHHHHHHHCCCCEEEE
VLDTPDLANDRLGLYLQFLEAKSPKIDVYQIDVIWPGDLAEHFVDLYEYGAEKYVDDHFQ
EECCCCCCCCCHHHHHEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHCHHHHHHHHCH
PIVENNTVEGRLVAMPWFTDAGLLYYRKDLLEKYDLEVPKTWEELERAAKIIQTGERAAG
HHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
NQDFWGYIWQGNAYEGLTCDALEWVASNGGGTIISPDKKITINNEKAIEAIEMAADWVGW
CCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEECCCCEEEECCHHHHHHHHHHHHHHCC
ISPPGTTGLVEESTRKMWEAGNAAFMRNWPYCYKLGNAEGSAIKGKFDVAPLPAGDSGNG
CCCCCCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCEEECCCCEECCCCCCCCCC
AATLGGWNLAVSKYSEHPEVAADFVFFLTGYEIQKLRATKGSFNPTIKALYEDEEVLEAN
EEEECCCEEEECCCCCCCHHHHHHHHHHCCCHHEEHHHCCCCCCCCEEEEECCCHHHCCC
PFFGKLYDVFVNAVARPSTATAPNYNEVSRLFFQAVHSVLSGEMDARTAVEYLELDLQDL
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
TGFEIGEPQK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]