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The map label for this gene is porD [H]

Identifier: 220932905

GI number: 220932905

Start: 2243457

End: 2243789

Strand: Reverse

Name: porD [H]

Synonym: Hore_20730

Alternate gene names: 220932905

Gene position: 2243789-2243457 (Counterclockwise)

Preceding gene: 220932906

Following gene: 220932904

Centisome position: 87.03

GC content: 45.65

Gene sequence:

>333_bases
ATGGCTAAAAAAGGATGGCGAGAACTACCCCGTGGTGGTGTAATTAAGGACCCCGGTAGTGCCAGCAAATACAGGACCGG
GAGCTGGAGGGTAAAACGTCCCCTGTGGAGTGAGGAAAAATGTATTCAGTGTCTTTTGTGCCATGTATACTGCCCTGATA
TAGCTATTGATGTTGAAGAGGGAAAGGTTATCGGGATTGATTATAACCACTGTAAGGGATGTGGTATCTGTGCCAACCAG
TGCCCCGTTCAGGCCCTGGAAATGATAAGTGAGGACAAGGGTGATGTTAATGATGAAACTGAAGAGGTAGATCATCAGAA
GAAATCAGAATAA

Upstream 100 bases:

>100_bases
GCCCGTGAAGAATTGAAAAAAAAGTTTTCCCACAAACCAGAGGTAATTGAGGGAAATATGCGCTCTATAGACATGGCTTA
CCGGGAGGTGAAAGGGCTTA

Downstream 100 bases:

>100_bases
AGGAGGTAGAAAAGAAATGAAACCCCAGATTGCTTTAACCGGAAATGAGGCCCTGGCCCTGGGAATGAGGCAGATAAACC
CGGATGTAGTTGCAGCTTAT

Product: pyruvate ferredoxin oxidoreductase subunit delta

Products: acetyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Pyruvate oxidoreductase delta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit delta [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MAKKGWRELPRGGVIKDPGSASKYRTGSWRVKRPLWSEEKCIQCLLCHVYCPDIAIDVEEGKVIGIDYNHCKGCGICANQ
CPVQALEMISEDKGDVNDETEEVDHQKKSE

Sequences:

>Translated_110_residues
MAKKGWRELPRGGVIKDPGSASKYRTGSWRVKRPLWSEEKCIQCLLCHVYCPDIAIDVEEGKVIGIDYNHCKGCGICANQ
CPVQALEMISEDKGDVNDETEEVDHQKKSE
>Mature_109_residues
AKKGWRELPRGGVIKDPGSASKYRTGSWRVKRPLWSEEKCIQCLLCHVYCPDIAIDVEEGKVIGIDYNHCKGCGICANQC
PVQALEMISEDKGDVNDETEEVDHQKKSE

Specific function: Ndh-1 Shuttles Electrons From NADH, Via Fmn And Iron- Sulfur (Fe-S) Centers, To Quinones In The Respiratory Chain. The Immediate Electron Acceptor For The Enzyme In This Species Is Believed To Be Ubiquinone. Couples The Redox Reaction To Proton Translocat

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.1

Molecular weight: Translated: 12352; Mature: 12221

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKGWRELPRGGVIKDPGSASKYRTGSWRVKRPLWSEEKCIQCLLCHVYCPDIAIDVEE
CCCCCCHHCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC
GKVIGIDYNHCKGCGICANQCPVQALEMISEDKGDVNDETEEVDHQKKSE
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AKKGWRELPRGGVIKDPGSASKYRTGSWRVKRPLWSEEKCIQCLLCHVYCPDIAIDVEE
CCCCCHHCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC
GKVIGIDYNHCKGCGICANQCPVQALEMISEDKGDVNDETEEVDHQKKSE
CEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pyruvate; CoA; oxidized ferredoxin

Specific reaction: pyruvate + CoA + oxidized ferredoxin = acetyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550425; 10360571 [H]