| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is mdxG [H]
Identifier: 220932877
GI number: 220932877
Start: 2206339
End: 2207172
Strand: Reverse
Name: mdxG [H]
Synonym: Hore_20450
Alternate gene names: 220932877
Gene position: 2207172-2206339 (Counterclockwise)
Preceding gene: 220932878
Following gene: 220932876
Centisome position: 85.61
GC content: 40.17
Gene sequence:
>834_bases ATGAATAAGGATAGCTTGCCAAAAAGGATAGTAATTCATATCATATTAATAATAGCTGTAGTCATTGCTGTTTATCCTGC CCTGAGGGTTTTTTCTATTTCATTACGTCCCATAAATGCCCTTCATACTACAGATTTAAGAATCATACCTGAAGGGGCCA GTTTTAAGTCTTATTATGATGTCCTCTTTAATACTGAGTTCCCCAAATGGTTTTTAAACAGTTCTCTGGTAGCTTTAATA ACTACTTTGATTGGTATCAGTGTGGCTTCAACTGCCGGTTATGCTTTTTCCAGGTTTAAGTTTATGGGACGGAAACCATT ATTAATGTTCTTTCTGGTAACCCAGATGTTTCCTGTTACCATGTTGATTTTACCATTATATTTGATGCTGGCCAGAATGG GGCTTATTAACTCCTATCTCGGGTTAATAATTATGTATACTACAACAGCTTTGCCCCTCTGTGTCTGGCAGATGAAGGGT TTTTATGATACTATTCCCTACTCTCTGGAAGAAGCAGGTTTGATTGATGGCCTCAGTCACTGGGGATGTTTTATTAAGAT AGCCTTTCCCCTGGCCAGACCAGGACTGGTTATTAGTGGATTGTTTTCTTTTATGGCCGCCTGGACCGATTTTATTGTAG CCAGGGTAATCATGCATAAGGAAGAATTATGGACACTGCCCCTGGGAATCCAGCATATGTCCGGTGAGTTTGATACCCAG TGGGGTATGTTTGCTGCTTCATCAATTCTGGTAGCCATTCCCGTTGTAATTGTATTTATATTCCTGGCACGTTTCCTTGT TAGTGGCCTGTCCCTGGGAGGAGTAAAAAGTTAA
Upstream 100 bases:
>100_bases TTACGCAGCTGCCCTGTCAGTTATAATTTTTGTTATTTTGCTGGTGTTCTCTATAGTCTTTATTAAGTATATTCGTGGTA CAGAGGGGGTGCAGTAACTA
Downstream 100 bases:
>100_bases ATATATTTTACAACAACCGGTTGAAATATTAACATATTTTATTAAAAATATGTTAATTGTATAGTAATTATAGTTACTCA CCTTTCCAGAGGATAAAAAA
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNKDSLPKRIVIHIILIIAVVIAVYPALRVFSISLRPINALHTTDLRIIPEGASFKSYYDVLFNTEFPKWFLNSSLVALI TTLIGISVASTAGYAFSRFKFMGRKPLLMFFLVTQMFPVTMLILPLYLMLARMGLINSYLGLIIMYTTTALPLCVWQMKG FYDTIPYSLEEAGLIDGLSHWGCFIKIAFPLARPGLVISGLFSFMAAWTDFIVARVIMHKEELWTLPLGIQHMSGEFDTQ WGMFAASSILVAIPVVIVFIFLARFLVSGLSLGGVKS
Sequences:
>Translated_277_residues MNKDSLPKRIVIHIILIIAVVIAVYPALRVFSISLRPINALHTTDLRIIPEGASFKSYYDVLFNTEFPKWFLNSSLVALI TTLIGISVASTAGYAFSRFKFMGRKPLLMFFLVTQMFPVTMLILPLYLMLARMGLINSYLGLIIMYTTTALPLCVWQMKG FYDTIPYSLEEAGLIDGLSHWGCFIKIAFPLARPGLVISGLFSFMAAWTDFIVARVIMHKEELWTLPLGIQHMSGEFDTQ WGMFAASSILVAIPVVIVFIFLARFLVSGLSLGGVKS >Mature_277_residues MNKDSLPKRIVIHIILIIAVVIAVYPALRVFSISLRPINALHTTDLRIIPEGASFKSYYDVLFNTEFPKWFLNSSLVALI TTLIGISVASTAGYAFSRFKFMGRKPLLMFFLVTQMFPVTMLILPLYLMLARMGLINSYLGLIIMYTTTALPLCVWQMKG FYDTIPYSLEEAGLIDGLSHWGCFIKIAFPLARPGLVISGLFSFMAAWTDFIVARVIMHKEELWTLPLGIQHMSGEFDTQ WGMFAASSILVAIPVVIVFIFLARFLVSGLSLGGVKS
Specific function: Part of the ABC transporter complex involved in maltodextrin import. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG3833
COG function: function code G; ABC-type maltose transport systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790464, Length=294, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=30.6859205776173, Blast_Score=141, Evalue=5e-35, Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=26.6917293233083, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30978; Mature: 30978
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDSLPKRIVIHIILIIAVVIAVYPALRVFSISLRPINALHTTDLRIIPEGASFKSYYD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCEEEECCCCHHHHHH VLFNTEFPKWFLNSSLVALITTLIGISVASTAGYAFSRFKFMGRKPLLMFFLVTQMFPVT HHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MLILPLYLMLARMGLINSYLGLIIMYTTTALPLCVWQMKGFYDTIPYSLEEAGLIDGLSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCHHH WGCFIKIAFPLARPGLVISGLFSFMAAWTDFIVARVIMHKEELWTLPLGIQHMSGEFDTQ HHHHHEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCH WGMFAASSILVAIPVVIVFIFLARFLVSGLSLGGVKS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNKDSLPKRIVIHIILIIAVVIAVYPALRVFSISLRPINALHTTDLRIIPEGASFKSYYD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEECCCCEEEECCCCHHHHHH VLFNTEFPKWFLNSSLVALITTLIGISVASTAGYAFSRFKFMGRKPLLMFFLVTQMFPVT HHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MLILPLYLMLARMGLINSYLGLIIMYTTTALPLCVWQMKGFYDTIPYSLEEAGLIDGLSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCHHH WGCFIKIAFPLARPGLVISGLFSFMAAWTDFIVARVIMHKEELWTLPLGIQHMSGEFDTQ HHHHHEEECHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCH WGMFAASSILVAIPVVIVFIFLARFLVSGLSLGGVKS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]