Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is yaaQ [H]

Identifier: 220932869

GI number: 220932869

Start: 2196805

End: 2197047

Strand: Reverse

Name: yaaQ [H]

Synonym: Hore_20370

Alternate gene names: 220932869

Gene position: 2197047-2196805 (Counterclockwise)

Preceding gene: 220932870

Following gene: 220932868

Centisome position: 85.22

GC content: 38.27

Gene sequence:

>243_bases
ATGGCCAGTACCGGTGGCTTTTTACGGGAAGGGAATACCACCCTTCTTATTGGAACAGATAAAGAACACATTGAAGAATT
ACTTGATATAATAAAAAGCAAATGTAAATCAAGGGAGAAAACAATTGCCCCCATGTCACCTGTTGCCAGTTCCCTGGAAG
GTTATTATTCCTTTCCCATGCAGGTTCAGGTTGGTGGGGCTACTGTTTTCATTATAGATGTAGAGAAATATATTAAATTA
TAA

Upstream 100 bases:

>100_bases
GAGAAGCGAGAATATGAAAATGGTTATTGCGGTGGTTAATGACCATGATGCTCATGATTTAATAGATTAGTTAACTACAG
CTGGCTATAAATTTACCAAG

Downstream 100 bases:

>100_bases
TTTTGTCATAAAAATAAATATGTTTAAATATCAAAAACCCACTACTAAATAGTGGGTTATATTTCGGTAGGAGACCTAAA
CCCCATAGTCGTCAGAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MASTGGFLREGNTTLLIGTDKEHIEELLDIIKSKCKSREKTIAPMSPVASSLEGYYSFPMQVQVGGATVFIIDVEKYIKL

Sequences:

>Translated_80_residues
MASTGGFLREGNTTLLIGTDKEHIEELLDIIKSKCKSREKTIAPMSPVASSLEGYYSFPMQVQVGGATVFIIDVEKYIKL
>Mature_79_residues
ASTGGFLREGNTTLLIGTDKEHIEELLDIIKSKCKSREKTIAPMSPVASSLEGYYSFPMQVQVGGATVFIIDVEKYIKL

Specific function: Unknown

COG id: COG3870

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010375
- InterPro:   IPR011322 [H]

Pfam domain/function: PF06153 DUF970 [H]

EC number: NA

Molecular weight: Translated: 8796; Mature: 8665

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTGGFLREGNTTLLIGTDKEHIEELLDIIKSKCKSREKTIAPMSPVASSLEGYYSFPM
CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCE
QVQVGGATVFIIDVEKYIKL
EEEECCEEEEEEEHHHHHCC
>Mature Secondary Structure 
ASTGGFLREGNTTLLIGTDKEHIEELLDIIKSKCKSREKTIAPMSPVASSLEGYYSFPM
CCCCCCEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCE
QVQVGGATVFIIDVEKYIKL
EEEECCEEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]