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The map label for this gene is 220932839

Identifier: 220932839

GI number: 220932839

Start: 2160623

End: 2162788

Strand: Reverse

Name: 220932839

Synonym: Hore_20050

Alternate gene names: NA

Gene position: 2162788-2160623 (Counterclockwise)

Preceding gene: 220932840

Following gene: 220932838

Centisome position: 83.89

GC content: 41.04

Gene sequence:

>2166_bases
TTGTTTGATAGCTGGGGTGGCCCTGATGGAAAGGATGTAGTTGAAAACAAGATTGTCATGGATAGTAATAAATCTATCAA
GGCAATTTTTATCAGCGAAAATCAGCCTCCGGTAGCCCAGGATGATTCAGTTGAAACAGATGTTGGCACACCGGTAACCA
TTAAACCCCTTACAAATGATTCCGACCCTGAAAAACAGTCCCTGGAAATAATTAAAGTGGGACAACCTTCCCATGGTAGG
GCCTCAATAGTTGATGGAGAGACAATAAAGTATGTCCCTGATCCTGCTTTTAGCGGAACAGATACCTTTACTTATATAAT
AGCTGATAATAAAAACCTTCAGACAGAAGCCATAATTACAGTAACTGTTGGTAGCAGTGATAATAATGCCCCCCTTGCAG
AAGATGATAATGTAACCACTACTGCAGATCAACCAGTAGTAGTTGATGTCCTGGCTAATGATACTGATGTAGACGGGGAT
ACCCTGACCTTACAGAGTGTTACTGCTCCATCAAATGGAACAGCTGTAAAAAATGGTGATGGAACTATAACCTACACTCC
TGACAATGGTTATACAGGTTCTGACAGCTTTACTTATACTGTAAGTGATGGTGAGTTAACAGCTGAGGCTACTGTAAATG
TTACCATTGGTAGTGGTAATGCTGCTCCTACAGCTAACGATGACTCTATTACTATGGACGAAGACACTACAACCACAATT
GACCTTCTGGCCAATGATACTGACCCGGAAGGGGACCCCATAAGTGTTTATGAAATTAATGATTCAGCTACTATGGGGAT
TGTCATTAATAATAATGATGGGACGGTCACCTTTACCCCATATACTGACTACCATGGAAATGCATCCTTTGCTTACACCA
TTGTTGATAGTAACAATAATATTTCAAATTCAGCGACAGTTACTGTTGAAATATTACCTGTAAATGACCCACCTGAGGCT
TATGATGATAATGTCAATGCCATGATGAATAACCCTCTTACGATAAATGTCCTTGAAAATGACTATGATGCTGAATTTGA
AACCTTACAGGTTAGTATAAGCACAAACCCAGTCCATGGTAGTGTAACAGTTAACCCTGATTATACGATAACCTATACTC
CTGATACTGATTATACCGGTTCAGATCAGTTTGATTATATAGTTAGTGATGGTAATGGATCAGATACAGGTACGGTATTT
ATCGAAGTAGTTACCGAAAATGCCCCTCCAGTAGCTGGGGACATTGTGGAAACTGCTAATGTTTATGGTACAATATGGAT
TGACTATGAGTATAATACGAGTGATCCTGACGGTGATTCACTGACCCTGGATAGCTTTACCCAGCCCACTTATGGTTTAG
TTTATGTAGATGAGTATGGGGATTTAATGTATGAAGCCCCCACCAGTCCGTGTACAGATTCCTTCACTTATACGGTAAGT
GATCCCTTTGGGGAAACGGCTACAGGTACGGTTACAGTAGAAGTAAGTGACCCCTATAATGTTAAAGGGACTTTAACCTT
CCCGGAATCTGTATCTTACCAGGAGTATACTGTCTTCCTGGATGACAACCTGGATGAAACCGATGGGTATGTTGATTGTT
TTGACTATTTTGTGGAGACAGCAACTACTGAGGCACCTTTCCGTTTTGACAATGTTGCCCCGGGAACCTATTATATTTAT
GCAAAATCAGGTATTTATGAAGGAGTGCATGGCCAGGCCTCTGACGGAACCTTACCGACATCCCCTACGGCAAGTGTTCC
TGATACCGGCAAAGTTAACTTTAATGTTGATATGTATGCCACAAAGGAGCTTAACGTTAATGGAACTATAACATTACCGG
AAGTGGCAACAGGGTTTTATATTGTGTTTATTGATACTGATACTGATAGCGGGAATGGACAGGAGGCATTTATAGCCGGG
GAGTATACTAATAAAGACCAGATCAGTTATTCTGCTTCTGTTACTCCAGGGACCTATTATGTCTATGCCATGGTAGACCT
GGATAATAACTCTGAGTATGTAGAGGCAATGGGTTATTATGGAGTAACTCCCCCCGATATACCAGGTGAACCCAATGCAG
TTATACCAGAATCAGGGTCAGTAACCCTGGACATCCTGACTGATTATATTATGACTCCTGCCAGTGTTAATGCTGTCACT
AAATAA

Upstream 100 bases:

>100_bases
AATTGAAATTGAGGGCAAGGGACAGGTTAACCCTTCAAGTGGTCAGAAGTTCGTTGAAGGGACAACTGTAAGTCTTAAGG
CCAGTCCTGATTAAGGCTGG

Downstream 100 bases:

>100_bases
GAAAAATGGTTTACATTTTTGTGTGTCAGAGCTAAATTAAGTATAAATTGTAACAAAGAGGTCCTGTCCCGGGGCCTCTT
TGTTACTTTTTAATTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Fibronectin Type III Domain-Containing Protein; VCBS Protein; Peptidase; Fibronectin Type III Domain Protein; Proprotein Convertase P; Outer Membrane Adhesin Like Protein; Vcbs Repeat Domain Protein; Cadherin; FG-GAP Repeat-Containing Protein; Fibronectin Like Domain-Containing Protein; RTX xin; Polyhydroxyalkanoate Synthesis Repressor PhaR; Hyalin Domain-Containing Protein; Ig Domain Protein; Ig Family Protein; Rhizobiocin/RTX xin; Surface-Associated Protein CshA; YD Repeat-Containing Protein; Lipoprotein; Fibronectin Type III; LVIVD Repeat Protein; PA14 Domain Protein; Type V Secretory Pathway Adhesin AidA; Rhs Family Protein; Cysteine-Rich Repeat Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Hemagglutinin/Hemolysin-Related Protein; PPE-Repeat Protein; Glycosyl Hydrolase Family; RTX xin Exported Protein; Type 1 Secretion C-Terminal Target Domain Protein; Cysteine-Rich Repeat-Containing Protein; Large Exoprotein; Autotransporter Beta-Domain-Containing Protein; Glucose/Sorbosone Dehydrogenase; PKD Domain Containing Protein; Peptidyl-Prolyl Cis-Trans Isomerase Cyclophilin Type; Copper Amine Oxidase Domain Protein; Conserved Repeat Domain Protein; Parallel Beta-Helix Repeat Protein; Ig Domain Family; Vcbs Repeat Protein; VBCS Repeat-Containing Protein; PKD Domain Protein; Type I Secretion Target Repeat Protein; RHS Repeat Family; Outer Membrane Adhesin-Like Protein; Peptidase S8 And; Large Exported Protein; FG-GAP Repeat Domain Protein; RHS/YD Repeat-Containing Protein; RTX Cytolytic xin Protein A; GLUG Domain-Containing Protein; Parallel Beta-Helix Repeat-Containing Protein; Immunoglobulin I-Set Domain-Containing Protein; Type 1 Secretion Target Domain-Containing Protein; Potential RTX Family Protein; Cell-Adhesion Protein; Type V Secretory Pathway; Cyclophilin Type Peptidylprolyl Isomerase; Ompa Domain Protein; YVTN Beta-Propeller Repeat-Containing Protein; Integrin Beta Chain-Like; Hemolysin; Dystroglycan-Type Cadherin Domain-Containing Protein

Number of amino acids: Translated: 721; Mature: 721

Protein sequence:

>721_residues
MFDSWGGPDGKDVVENKIVMDSNKSIKAIFISENQPPVAQDDSVETDVGTPVTIKPLTNDSDPEKQSLEIIKVGQPSHGR
ASIVDGETIKYVPDPAFSGTDTFTYIIADNKNLQTEAIITVTVGSSDNNAPLAEDDNVTTTADQPVVVDVLANDTDVDGD
TLTLQSVTAPSNGTAVKNGDGTITYTPDNGYTGSDSFTYTVSDGELTAEATVNVTIGSGNAAPTANDDSITMDEDTTTTI
DLLANDTDPEGDPISVYEINDSATMGIVINNNDGTVTFTPYTDYHGNASFAYTIVDSNNNISNSATVTVEILPVNDPPEA
YDDNVNAMMNNPLTINVLENDYDAEFETLQVSISTNPVHGSVTVNPDYTITYTPDTDYTGSDQFDYIVSDGNGSDTGTVF
IEVVTENAPPVAGDIVETANVYGTIWIDYEYNTSDPDGDSLTLDSFTQPTYGLVYVDEYGDLMYEAPTSPCTDSFTYTVS
DPFGETATGTVTVEVSDPYNVKGTLTFPESVSYQEYTVFLDDNLDETDGYVDCFDYFVETATTEAPFRFDNVAPGTYYIY
AKSGIYEGVHGQASDGTLPTSPTASVPDTGKVNFNVDMYATKELNVNGTITLPEVATGFYIVFIDTDTDSGNGQEAFIAG
EYTNKDQISYSASVTPGTYYVYAMVDLDNNSEYVEAMGYYGVTPPDIPGEPNAVIPESGSVTLDILTDYIMTPASVNAVT
K

Sequences:

>Translated_721_residues
MFDSWGGPDGKDVVENKIVMDSNKSIKAIFISENQPPVAQDDSVETDVGTPVTIKPLTNDSDPEKQSLEIIKVGQPSHGR
ASIVDGETIKYVPDPAFSGTDTFTYIIADNKNLQTEAIITVTVGSSDNNAPLAEDDNVTTTADQPVVVDVLANDTDVDGD
TLTLQSVTAPSNGTAVKNGDGTITYTPDNGYTGSDSFTYTVSDGELTAEATVNVTIGSGNAAPTANDDSITMDEDTTTTI
DLLANDTDPEGDPISVYEINDSATMGIVINNNDGTVTFTPYTDYHGNASFAYTIVDSNNNISNSATVTVEILPVNDPPEA
YDDNVNAMMNNPLTINVLENDYDAEFETLQVSISTNPVHGSVTVNPDYTITYTPDTDYTGSDQFDYIVSDGNGSDTGTVF
IEVVTENAPPVAGDIVETANVYGTIWIDYEYNTSDPDGDSLTLDSFTQPTYGLVYVDEYGDLMYEAPTSPCTDSFTYTVS
DPFGETATGTVTVEVSDPYNVKGTLTFPESVSYQEYTVFLDDNLDETDGYVDCFDYFVETATTEAPFRFDNVAPGTYYIY
AKSGIYEGVHGQASDGTLPTSPTASVPDTGKVNFNVDMYATKELNVNGTITLPEVATGFYIVFIDTDTDSGNGQEAFIAG
EYTNKDQISYSASVTPGTYYVYAMVDLDNNSEYVEAMGYYGVTPPDIPGEPNAVIPESGSVTLDILTDYIMTPASVNAVT
K
>Mature_721_residues
MFDSWGGPDGKDVVENKIVMDSNKSIKAIFISENQPPVAQDDSVETDVGTPVTIKPLTNDSDPEKQSLEIIKVGQPSHGR
ASIVDGETIKYVPDPAFSGTDTFTYIIADNKNLQTEAIITVTVGSSDNNAPLAEDDNVTTTADQPVVVDVLANDTDVDGD
TLTLQSVTAPSNGTAVKNGDGTITYTPDNGYTGSDSFTYTVSDGELTAEATVNVTIGSGNAAPTANDDSITMDEDTTTTI
DLLANDTDPEGDPISVYEINDSATMGIVINNNDGTVTFTPYTDYHGNASFAYTIVDSNNNISNSATVTVEILPVNDPPEA
YDDNVNAMMNNPLTINVLENDYDAEFETLQVSISTNPVHGSVTVNPDYTITYTPDTDYTGSDQFDYIVSDGNGSDTGTVF
IEVVTENAPPVAGDIVETANVYGTIWIDYEYNTSDPDGDSLTLDSFTQPTYGLVYVDEYGDLMYEAPTSPCTDSFTYTVS
DPFGETATGTVTVEVSDPYNVKGTLTFPESVSYQEYTVFLDDNLDETDGYVDCFDYFVETATTEAPFRFDNVAPGTYYIY
AKSGIYEGVHGQASDGTLPTSPTASVPDTGKVNFNVDMYATKELNVNGTITLPEVATGFYIVFIDTDTDSGNGQEAFIAG
EYTNKDQISYSASVTPGTYYVYAMVDLDNNSEYVEAMGYYGVTPPDIPGEPNAVIPESGSVTLDILTDYIMTPASVNAVT
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77249; Mature: 77249

Theoretical pI: Translated: 3.33; Mature: 3.33

Prosite motif: PS50268 CADHERIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDSWGGPDGKDVVENKIVMDSNKSIKAIFISENQPPVAQDDSVETDVGTPVTIKPLTND
CCCCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC
SDPEKQSLEIIKVGQPSHGRASIVDGETIKYVPDPAFSGTDTFTYIIADNKNLQTEAIIT
CCCCCCCEEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
VTVGSSDNNAPLAEDDNVTTTADQPVVVDVLANDTDVDGDTLTLQSVTAPSNGTAVKNGD
EEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEECCC
GTITYTPDNGYTGSDSFTYTVSDGELTAEATVNVTIGSGNAAPTANDDSITMDEDTTTTI
CEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCEEE
DLLANDTDPEGDPISVYEINDSATMGIVINNNDGTVTFTPYTDYHGNASFAYTIVDSNNN
EEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCC
ISNSATVTVEILPVNDPPEAYDDNVNAMMNNPLTINVLENDYDAEFETLQVSISTNPVHG
CCCCEEEEEEEEECCCCCHHHCCCCCEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEE
SVTVNPDYTITYTPDTDYTGSDQFDYIVSDGNGSDTGTVFIEVVTENAPPVAGDIVETAN
EEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEECCC
VYGTIWIDYEYNTSDPDGDSLTLDSFTQPTYGLVYVDEYGDLMYEAPTSPCTDSFTYTVS
EEEEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEC
DPFGETATGTVTVEVSDPYNVKGTLTFPESVSYQEYTVFLDDNLDETDGYVDCFDYFVET
CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHH
ATTEAPFRFDNVAPGTYYIYAKSGIYEGVHGQASDGTLPTSPTASVPDTGKVNFNVDMYA
CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
TKELNVNGTITLPEVATGFYIVFIDTDTDSGNGQEAFIAGEYTNKDQISYSASVTPGTYY
EEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEE
VYAMVDLDNNSEYVEAMGYYGVTPPDIPGEPNAVIPESGSVTLDILTDYIMTPASVNAVT
EEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHCCCCCCEEEC
K
C
>Mature Secondary Structure
MFDSWGGPDGKDVVENKIVMDSNKSIKAIFISENQPPVAQDDSVETDVGTPVTIKPLTND
CCCCCCCCCCHHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCC
SDPEKQSLEIIKVGQPSHGRASIVDGETIKYVPDPAFSGTDTFTYIIADNKNLQTEAIIT
CCCCCCCEEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE
VTVGSSDNNAPLAEDDNVTTTADQPVVVDVLANDTDVDGDTLTLQSVTAPSNGTAVKNGD
EEECCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCEEECCC
GTITYTPDNGYTGSDSFTYTVSDGELTAEATVNVTIGSGNAAPTANDDSITMDEDTTTTI
CEEEECCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCEEE
DLLANDTDPEGDPISVYEINDSATMGIVINNNDGTVTFTPYTDYHGNASFAYTIVDSNNN
EEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCC
ISNSATVTVEILPVNDPPEAYDDNVNAMMNNPLTINVLENDYDAEFETLQVSISTNPVHG
CCCCEEEEEEEEECCCCCHHHCCCCCEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEE
SVTVNPDYTITYTPDTDYTGSDQFDYIVSDGNGSDTGTVFIEVVTENAPPVAGDIVETAN
EEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEECCC
VYGTIWIDYEYNTSDPDGDSLTLDSFTQPTYGLVYVDEYGDLMYEAPTSPCTDSFTYTVS
EEEEEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEEC
DPFGETATGTVTVEVSDPYNVKGTLTFPESVSYQEYTVFLDDNLDETDGYVDCFDYFVET
CCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHH
ATTEAPFRFDNVAPGTYYIYAKSGIYEGVHGQASDGTLPTSPTASVPDTGKVNFNVDMYA
CCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
TKELNVNGTITLPEVATGFYIVFIDTDTDSGNGQEAFIAGEYTNKDQISYSASVTPGTYY
EEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEE
VYAMVDLDNNSEYVEAMGYYGVTPPDIPGEPNAVIPESGSVTLDILTDYIMTPASVNAVT
EEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEECCCCCCEEEEEEHHHHCCCCCCEEEC
K
C

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA