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The map label for this gene is 220932833

Identifier: 220932833

GI number: 220932833

Start: 2155646

End: 2156623

Strand: Reverse

Name: 220932833

Synonym: Hore_19990

Alternate gene names: NA

Gene position: 2156623-2155646 (Counterclockwise)

Preceding gene: 220932834

Following gene: 220932832

Centisome position: 83.65

GC content: 43.97

Gene sequence:

>978_bases
ATGGAGAAGGTGAGTAGGAAAGTAGTTCTGGCAGGAATGGTCTTTTTTTTATTGTTGTTTGCAGCAGGTTGTGAGAAGGA
ATCAGAGGTACTAAAAGTAGGTATTGTTCAGATTGTTGAACACCCGGCTCTGGATGCAGCCCGTAAGGGCTTTATCGATG
CCCTGGCTGATAATGGGTATAAGGAAGGAGAAAATATTGAATACGATTATCAGAATGCCCAGGGCGATATGTCTCTGGCC
AGGACGATTGCCGGAAAGTTTAAGCGGGAAAAACCTGATTTGATCCTGGCAATTGCTACTCCAACAGCCCAGGCTGTTGC
CAATACGATAAAGGATATACCGATATTTATTACGGCAGTAACCGACCCCGTAGCAGCTGGCCTGGTTAAGTCTATGGAGA
AACCGGGAACCAATGTGACCGGGACTACTGATATGACACCGGTAGAAAAACAGATTAATCTCCTCTTGAAGTTTAAACCT
GATACCACTAAAATCGGAGTGGTTTATAATGCCGGTGAGGTTAATTCAGTTGTCCAGGTGGATTTAGCCCGTAAAGTCTG
CAAGGAGCTTGATATAGAACTGGTAGAGGCAACTGCCAGTAATAGTAGTAGTGTATATCAGGCGGCCCAGTCTCTAATAA
ACAGAGTAGATGCCATTTATGTTCCAACCGATAATACAGTGGTTTCTGCCATTGAATCGGTGGTTAAAGTTGCCGAAGAG
AATGATATTCCACTTATTGTCGGGGAAGAGGACTCGGTCAAAAGGGGAGGTCTGGCTACTGTAGGTATTAACTATTACGA
GCTTGGATATCAAACAGGGGAGATGGCCCTGGAGGTTATTAAGAATGATGCTAAACCGGAAGAGATGGCAATACAGAAAC
AGGATAAGGTCAGGCTGGTAATAAATGAAAAGGCGGCTGAAGAAATGGGAGTTACCATTTCTTCTGAGCTTAAGAATGAG
GCGGCAAAAATCTATTAA

Upstream 100 bases:

>100_bases
GTTATAATGTGTTTGACAACCAAAATAACCCATGTTATAATCTTTATAAATATTAACAATTACATAATTTTATTCAAATT
TACTGGAGGGATTTTTGATA

Downstream 100 bases:

>100_bases
TTAGATATATTTTATTAACAAGCCTAATTATACGGCCGTTACGGTCGGTCTGTATTCAATTATTAAACCGGGCAGGGGTT
GTTTAACCTGATTTGAGATA

Product: ABC transporter, periplasmic component

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein; ABC Transporter Periplasmic Protein; ABC Transporter Permease; ABC-Type Transporter Periplasmic Component; Permease; Permease Protein; Exported Protein; ABC-Type Transporter; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MEKVSRKVVLAGMVFFLLLFAAGCEKESEVLKVGIVQIVEHPALDAARKGFIDALADNGYKEGENIEYDYQNAQGDMSLA
RTIAGKFKREKPDLILAIATPTAQAVANTIKDIPIFITAVTDPVAAGLVKSMEKPGTNVTGTTDMTPVEKQINLLLKFKP
DTTKIGVVYNAGEVNSVVQVDLARKVCKELDIELVEATASNSSSVYQAAQSLINRVDAIYVPTDNTVVSAIESVVKVAEE
NDIPLIVGEEDSVKRGGLATVGINYYELGYQTGEMALEVIKNDAKPEEMAIQKQDKVRLVINEKAAEEMGVTISSELKNE
AAKIY

Sequences:

>Translated_325_residues
MEKVSRKVVLAGMVFFLLLFAAGCEKESEVLKVGIVQIVEHPALDAARKGFIDALADNGYKEGENIEYDYQNAQGDMSLA
RTIAGKFKREKPDLILAIATPTAQAVANTIKDIPIFITAVTDPVAAGLVKSMEKPGTNVTGTTDMTPVEKQINLLLKFKP
DTTKIGVVYNAGEVNSVVQVDLARKVCKELDIELVEATASNSSSVYQAAQSLINRVDAIYVPTDNTVVSAIESVVKVAEE
NDIPLIVGEEDSVKRGGLATVGINYYELGYQTGEMALEVIKNDAKPEEMAIQKQDKVRLVINEKAAEEMGVTISSELKNE
AAKIY
>Mature_325_residues
MEKVSRKVVLAGMVFFLLLFAAGCEKESEVLKVGIVQIVEHPALDAARKGFIDALADNGYKEGENIEYDYQNAQGDMSLA
RTIAGKFKREKPDLILAIATPTAQAVANTIKDIPIFITAVTDPVAAGLVKSMEKPGTNVTGTTDMTPVEKQINLLLKFKP
DTTKIGVVYNAGEVNSVVQVDLARKVCKELDIELVEATASNSSSVYQAAQSLINRVDAIYVPTDNTVVSAIESVVKVAEE
NDIPLIVGEEDSVKRGGLATVGINYYELGYQTGEMALEVIKNDAKPEEMAIQKQDKVRLVINEKAAEEMGVTISSELKNE
AAKIY

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35172; Mature: 35172

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVSRKVVLAGMVFFLLLFAAGCEKESEVLKVGIVQIVEHPALDAARKGFIDALADNGY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
KEGENIEYDYQNAQGDMSLARTIAGKFKREKPDLILAIATPTAQAVANTIKDIPIFITAV
CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEC
TDPVAAGLVKSMEKPGTNVTGTTDMTPVEKQINLLLKFKPDTTKIGVVYNAGEVNSVVQV
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEEEECCCCCHHHHH
DLARKVCKELDIELVEATASNSSSVYQAAQSLINRVDAIYVPTDNTVVSAIESVVKVAEE
HHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCC
NDIPLIVGEEDSVKRGGLATVGINYYELGYQTGEMALEVIKNDAKPEEMAIQKQDKVRLV
CCCCEEECCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE
INEKAAEEMGVTISSELKNEAAKIY
EECHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEKVSRKVVLAGMVFFLLLFAAGCEKESEVLKVGIVQIVEHPALDAARKGFIDALADNGY
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
KEGENIEYDYQNAQGDMSLARTIAGKFKREKPDLILAIATPTAQAVANTIKDIPIFITAV
CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEEC
TDPVAAGLVKSMEKPGTNVTGTTDMTPVEKQINLLLKFKPDTTKIGVVYNAGEVNSVVQV
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEEEEEECCCCCHHHHH
DLARKVCKELDIELVEATASNSSSVYQAAQSLINRVDAIYVPTDNTVVSAIESVVKVAEE
HHHHHHHHHCCCEEEEHHCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCC
NDIPLIVGEEDSVKRGGLATVGINYYELGYQTGEMALEVIKNDAKPEEMAIQKQDKVRLV
CCCCEEECCCCCCCCCCEEEECCCCEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEE
INEKAAEEMGVTISSELKNEAAKIY
EECHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA