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The map label for this gene is yesN [H]

Identifier: 220932825

GI number: 220932825

Start: 2147471

End: 2148631

Strand: Reverse

Name: yesN [H]

Synonym: Hore_19910

Alternate gene names: 220932825

Gene position: 2148631-2147471 (Counterclockwise)

Preceding gene: 220932828

Following gene: 220932824

Centisome position: 83.34

GC content: 34.02

Gene sequence:

>1161_bases
TTGTATAACCTGCTGCTGGTAGAGGATGAAAAGCCTTTACTGGAGAAAATTGCCTGTCATGTTGACTGGGAGGATAACGG
TTATAAAGTGTACACAGCCCGGAATGGCAAACAAGCCCTTAAAATATTGAATAATGTCAGGATTGATATCCTGGTAACTG
ATATTAAAATGCCCGACATATCAGGGATAAGGTTAATTGAGGAAATTAAAGATAATAAGGCCGATATGTCTACTATTATC
ATTTCGGGTCATGCTGAATTTGAATATGCTCAGAAGTCGATTCGGCTGGGGGTTACTGATTATCTTCTCAAGCCCTTTCA
TTCTTCAAGGTTATTAGAGGTTGTAAACCGGGCCCGGAAACAGTTACTTAAAAAGAGAAAAGAGAAGGAAGATTTGAAGA
GATTTAAACAGGAACTAAATAAAATATTGAAAGAGAATGACCAGTTAGACAGTAAACTACAGATGTTTTTTAACAGAGAC
CGTGATGAATTTTTCAGGGAGTATTCTTTAATAATTAAAAATGAGAATATGTTTAATGAACTTAAAAATGGACGTGAAGA
GGATTTAATTATAGCTATTAAAAAACTATTTGAAGATATAAACGAGTTAAATATAAATCAGGAGTCAGCCCTGTTTATTA
TCCATACTGTTGTTCTTTTAACTCTGAAAAATATAAAAGAAATGGGTTTTGATTTAAAGGAGATTATAGATTTTATGGAG
CTTGGTAACAAATCAATAGATGTAGAAAAGGTTTCAAAAGAAACCATGGAAACCTGGTTAACAGGATTTTTAGTAAAGGT
TAGTCAGTACATAGCTCAGCAAAAATCAGAAGATAGGGAACTTGTCTTAAAGGTTAAGGAGGCGGTAAATAAAAACCTGT
CAAGTGGCCTAACGTTAAACCAGCTGGCTGAAGAGTTTAATTTAAGCAACAGCAGTCTGAGTCAACTCTTCCGTAAATAT
ACAGGAAAGAATTTCAGTGAATATCTTGATGATATCAGGATAAATAAAGCCAGAGAGCTTTTAAAAACAACAGGTAAAAA
GGTATACGAGATTGCAGATGAAATAGGTTTTGATGACCCCTATTATTTTAGTTCCTGGTTTAAAAAGAGAACAGGTGTAT
CCCCAACTACTTACCGGGAAAATTTTATTTTATTTGAATAG

Upstream 100 bases:

>100_bases
AATAATAAAAAATTCAGGTTTAGATTAAATATTCCGGTAGATTGTTTTTTATGATAATTGGGTATTAGTTTTATTAATTT
AATCATGGGAGGGAAGAATA

Downstream 100 bases:

>100_bases
CCCTCCAAAATCTTAAAATAATCCGAGGATTCTTAAAAATATTCAATTGTTTAAAATTTAGAAAATTTGTATTATTAATA
TAGAATCCAATAAATGGGGG

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MYNLLLVEDEKPLLEKIACHVDWEDNGYKVYTARNGKQALKILNNVRIDILVTDIKMPDISGIRLIEEIKDNKADMSTII
ISGHAEFEYAQKSIRLGVTDYLLKPFHSSRLLEVVNRARKQLLKKRKEKEDLKRFKQELNKILKENDQLDSKLQMFFNRD
RDEFFREYSLIIKNENMFNELKNGREEDLIIAIKKLFEDINELNINQESALFIIHTVVLLTLKNIKEMGFDLKEIIDFME
LGNKSIDVEKVSKETMETWLTGFLVKVSQYIAQQKSEDRELVLKVKEAVNKNLSSGLTLNQLAEEFNLSNSSLSQLFRKY
TGKNFSEYLDDIRINKARELLKTTGKKVYEIADEIGFDDPYYFSSWFKKRTGVSPTTYRENFILFE

Sequences:

>Translated_386_residues
MYNLLLVEDEKPLLEKIACHVDWEDNGYKVYTARNGKQALKILNNVRIDILVTDIKMPDISGIRLIEEIKDNKADMSTII
ISGHAEFEYAQKSIRLGVTDYLLKPFHSSRLLEVVNRARKQLLKKRKEKEDLKRFKQELNKILKENDQLDSKLQMFFNRD
RDEFFREYSLIIKNENMFNELKNGREEDLIIAIKKLFEDINELNINQESALFIIHTVVLLTLKNIKEMGFDLKEIIDFME
LGNKSIDVEKVSKETMETWLTGFLVKVSQYIAQQKSEDRELVLKVKEAVNKNLSSGLTLNQLAEEFNLSNSSLSQLFRKY
TGKNFSEYLDDIRINKARELLKTTGKKVYEIADEIGFDDPYYFSSWFKKRTGVSPTTYRENFILFE
>Mature_386_residues
MYNLLLVEDEKPLLEKIACHVDWEDNGYKVYTARNGKQALKILNNVRIDILVTDIKMPDISGIRLIEEIKDNKADMSTII
ISGHAEFEYAQKSIRLGVTDYLLKPFHSSRLLEVVNRARKQLLKKRKEKEDLKRFKQELNKILKENDQLDSKLQMFFNRD
RDEFFREYSLIIKNENMFNELKNGREEDLIIAIKKLFEDINELNINQESALFIIHTVVLLTLKNIKEMGFDLKEIIDFME
LGNKSIDVEKVSKETMETWLTGFLVKVSQYIAQQKSEDRELVLKVKEAVNKNLSSGLTLNQLAEEFNLSNSSLSQLFRKY
TGKNFSEYLDDIRINKARELLKTTGKKVYEIADEIGFDDPYYFSSWFKKRTGVSPTTYRENFILFE

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=29.8245614035088, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1790391, Length=110, Percent_Identity=35.4545454545455, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788905, Length=127, Percent_Identity=29.9212598425197, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786251, Length=102, Percent_Identity=37.2549019607843, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI226510985, Length=112, Percent_Identity=32.1428571428571, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 45337; Mature: 45337

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLLLVEDEKPLLEKIACHVDWEDNGYKVYTARNGKQALKILNNVRIDILVTDIKMPDI
CCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEEEECCCCCC
SGIRLIEEIKDNKADMSTIIISGHAEFEYAQKSIRLGVTDYLLKPFHSSRLLEVVNRARK
CHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHH
QLLKKRKEKEDLKRFKQELNKILKENDQLDSKLQMFFNRDRDEFFREYSLIIKNENMFNE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
LKNGREEDLIIAIKKLFEDINELNINQESALFIIHTVVLLTLKNIKEMGFDLKEIIDFME
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LGNKSIDVEKVSKETMETWLTGFLVKVSQYIAQQKSEDRELVLKVKEAVNKNLSSGLTLN
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHH
QLAEEFNLSNSSLSQLFRKYTGKNFSEYLDDIRINKARELLKTTGKKVYEIADEIGFDDP
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YYFSSWFKKRTGVSPTTYRENFILFE
HHHHHHHHHHCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MYNLLLVEDEKPLLEKIACHVDWEDNGYKVYTARNGKQALKILNNVRIDILVTDIKMPDI
CCEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCEEEEEEEECCCCCC
SGIRLIEEIKDNKADMSTIIISGHAEFEYAQKSIRLGVTDYLLKPFHSSRLLEVVNRARK
CHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHH
QLLKKRKEKEDLKRFKQELNKILKENDQLDSKLQMFFNRDRDEFFREYSLIIKNENMFNE
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
LKNGREEDLIIAIKKLFEDINELNINQESALFIIHTVVLLTLKNIKEMGFDLKEIIDFME
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LGNKSIDVEKVSKETMETWLTGFLVKVSQYIAQQKSEDRELVLKVKEAVNKNLSSGLTLN
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCHH
QLAEEFNLSNSSLSQLFRKYTGKNFSEYLDDIRINKARELLKTTGKKVYEIADEIGFDDP
HHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YYFSSWFKKRTGVSPTTYRENFILFE
HHHHHHHHHHCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]