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The map label for this gene is ytsP [H]

Identifier: 220932746

GI number: 220932746

Start: 2043759

End: 2044247

Strand: Reverse

Name: ytsP [H]

Synonym: Hore_19110

Alternate gene names: 220932746

Gene position: 2044247-2043759 (Counterclockwise)

Preceding gene: 220932748

Following gene: 220932745

Centisome position: 79.29

GC content: 40.08

Gene sequence:

>489_bases
GTGGAGCAGAAAGAAGAAAAACTCAGGGAAATAAATGAGAAGCTGGAATATTTAATTGGTAATGAAAGGGACTGGCTTGC
CAACCTGGCCAATGCAGCAGCCCTTTTATATAATGAGCTTGATGAAGTAAACTGGGCCGGGTTTTATCTAATGCGCGGTG
GTGAACTTGTCCTGGGCCCTTTTCAGGGACTACCGGCCTGTGTTAGAATTAAAGTAGGAAGGGGAGTTTGTGGTTCAGCA
GTCAGGGATAGAAAAACATATCTAGTACCTGATGTTCATAAATTTCCCGGCCATATTGCCTGTGACGAGGCTTCAAGGTC
AGAAATAGTTATTCCTGTTGAGGTAGATGGAGATATAATCGGGGTTCTGGATATAGATAGCCCGGTTAAAAATCGTTTTG
ATGAAATCGACAAGAGGTATTTAGAAGAATTTGTGAAAAAAATAATTAACTTATCAGATTTTATTGACCTGGAAATAGAT
AAAGTATAG

Upstream 100 bases:

>100_bases
ACCAGATTCTACTAGATGTGGGAATAATAAAGCATAGGTATAATGGTGGTTGATAATCTGTTGTACAGGAATTTTATTAT
TACGAAAGGGAGTGAATGAA

Downstream 100 bases:

>100_bases
AAAGGGGTGCAGTAAATTGGATGAGCTGGATTACAAATTGCTGGATGACCTGTCGAAAAACAGTCGAGTAAGTTATGCAG
AACTGGAACGCAAATATAAT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MEQKEEKLREINEKLEYLIGNERDWLANLANAAALLYNELDEVNWAGFYLMRGGELVLGPFQGLPACVRIKVGRGVCGSA
VRDRKTYLVPDVHKFPGHIACDEASRSEIVIPVEVDGDIIGVLDIDSPVKNRFDEIDKRYLEEFVKKIINLSDFIDLEID
KV

Sequences:

>Translated_162_residues
MEQKEEKLREINEKLEYLIGNERDWLANLANAAALLYNELDEVNWAGFYLMRGGELVLGPFQGLPACVRIKVGRGVCGSA
VRDRKTYLVPDVHKFPGHIACDEASRSEIVIPVEVDGDIIGVLDIDSPVKNRFDEIDKRYLEEFVKKIINLSDFIDLEID
KV
>Mature_162_residues
MEQKEEKLREINEKLEYLIGNERDWLANLANAAALLYNELDEVNWAGFYLMRGGELVLGPFQGLPACVRIKVGRGVCGSA
VRDRKTYLVPDVHKFPGHIACDEASRSEIVIPVEVDGDIIGVLDIDSPVKNRFDEIDKRYLEEFVKKIINLSDFIDLEID
KV

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=154, Percent_Identity=51.2987012987013, Blast_Score=156, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6322781, Length=153, Percent_Identity=44.4444444444444, Blast_Score=138, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18392; Mature: 18392

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQKEEKLREINEKLEYLIGNERDWLANLANAAALLYNELDEVNWAGFYLMRGGELVLGP
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
FQGLPACVRIKVGRGVCGSAVRDRKTYLVPDVHKFPGHIACDEASRSEIVIPVEVDGDII
CCCCCEEEEEEECCCCCCHHHHCCCEEECCCHHHCCCEEEECCCCCCEEEEEEEECCCEE
GVLDIDSPVKNRFDEIDKRYLEEFVKKIINLSDFIDLEIDKV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECC
>Mature Secondary Structure
MEQKEEKLREINEKLEYLIGNERDWLANLANAAALLYNELDEVNWAGFYLMRGGELVLGP
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEC
FQGLPACVRIKVGRGVCGSAVRDRKTYLVPDVHKFPGHIACDEASRSEIVIPVEVDGDII
CCCCCEEEEEEECCCCCCHHHHCCCEEECCCHHHCCCEEEECCCCCCEEEEEEEECCCEE
GVLDIDSPVKNRFDEIDKRYLEEFVKKIINLSDFIDLEIDKV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]