| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is kdtX [H]
Identifier: 220932722
GI number: 220932722
Start: 2016085
End: 2016858
Strand: Reverse
Name: kdtX [H]
Synonym: Hore_18870
Alternate gene names: 220932722
Gene position: 2016858-2016085 (Counterclockwise)
Preceding gene: 220932723
Following gene: 220932721
Centisome position: 78.23
GC content: 39.15
Gene sequence:
>774_bases ATGGCAGAAAATAGCATTGGGGCCCTGGTTTTAACTTATAATGAAGAGGATAATATAAAGGACTGCCTGGAGAGTATTAA GTGGGTAGATGAAATTGTAGTGGTGGATTCCTATAGTGATGATGATACCATTGACATATGTAAGGAATATACAGATAAGG TTTACGCTCGTAAGTTTGATAACTTCTCGTCCCAGAGGAATTTTGGCCTGGGTAAATTAAAAACAGACTGGGTTCTGGTG GTTGATGCCGATGAGAGGGTTACTCCTGAGTTGAAGGAGGAAATATATGGTGCCCTGCAGAGTGGCCCATTTTTGGCCTA TCAGGTTCCCCGTAAAAATTATTTCCTCGGTAGATGGATAAAATACTGTGGCTGGTATCCTGATTATACTTTAAGGCTGT TCAAGGTATCTGAGGGGGACTATAAGTTTTCCGGTAAGGTTCATGAGGATGTCAGGGTCAACGGGAAAGTTGGTATTCTA AAAAACCCCCTGGTTCACCTCACCTACCGGGATTTATCAAGTTATATTAAAAAAATGGACCTCTATAGTACTCTCTGGGC GGAGGAAAAATTTAAAAAAGGTAAAGAAGTTGGCCTTTTATATATTTTGCTGAGACCCCCTGTTGAGTTTATTAAAAAAT ATTTTCTGAAAAGGGGATTTCTTTCTGGTTCAGAAGGGTTTATATTATCTATTGTGTCTTCATATTATGTGTTTTTAAAA TATGCCAAGCTATGGGAGCAAAATAAAAGCCTGTCAGGAGCTGAAGACCATTGA
Upstream 100 bases:
>100_bases CCTGTGGACAGCAGGAATGTCCTGAAGGGCACCACCGGTGCTTGAGGGAGATCAGTGTTGATGAAGTTTTTGAGGAAATA AAGAAGAGTGGGTGGTTTTA
Downstream 100 bases:
>100_bases AGAAGTTGTTTTTCCTAAATAGCTGTCGGGAATGGGGCGGAGGAGAAAAATGGACTCTGGAAGTAGCCCAAAAATTTAAT AATAAAGAAGGTTTTGAAGT
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAENSIGALVLTYNEEDNIKDCLESIKWVDEIVVVDSYSDDDTIDICKEYTDKVYARKFDNFSSQRNFGLGKLKTDWVLV VDADERVTPELKEEIYGALQSGPFLAYQVPRKNYFLGRWIKYCGWYPDYTLRLFKVSEGDYKFSGKVHEDVRVNGKVGIL KNPLVHLTYRDLSSYIKKMDLYSTLWAEEKFKKGKEVGLLYILLRPPVEFIKKYFLKRGFLSGSEGFILSIVSSYYVFLK YAKLWEQNKSLSGAEDH
Sequences:
>Translated_257_residues MAENSIGALVLTYNEEDNIKDCLESIKWVDEIVVVDSYSDDDTIDICKEYTDKVYARKFDNFSSQRNFGLGKLKTDWVLV VDADERVTPELKEEIYGALQSGPFLAYQVPRKNYFLGRWIKYCGWYPDYTLRLFKVSEGDYKFSGKVHEDVRVNGKVGIL KNPLVHLTYRDLSSYIKKMDLYSTLWAEEKFKKGKEVGLLYILLRPPVEFIKKYFLKRGFLSGSEGFILSIVSSYYVFLK YAKLWEQNKSLSGAEDH >Mature_256_residues AENSIGALVLTYNEEDNIKDCLESIKWVDEIVVVDSYSDDDTIDICKEYTDKVYARKFDNFSSQRNFGLGKLKTDWVLVV DADERVTPELKEEIYGALQSGPFLAYQVPRKNYFLGRWIKYCGWYPDYTLRLFKVSEGDYKFSGKVHEDVRVNGKVGILK NPLVHLTYRDLSSYIKKMDLYSTLWAEEKFKKGKEVGLLYILLRPPVEFIKKYFLKRGFLSGSEGFILSIVSSYYVFLKY AKLWEQNKSLSGAEDH
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 29922; Mature: 29790
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENSIGALVLTYNEEDNIKDCLESIKWVDEIVVVDSYSDDDTIDICKEYTDKVYARKFD CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC NFSSQRNFGLGKLKTDWVLVVDADERVTPELKEEIYGALQSGPFLAYQVPRKNYFLGRWI CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH KYCGWYPDYTLRLFKVSEGDYKFSGKVHEDVRVNGKVGILKNPLVHLTYRDLSSYIKKMD HHCCCCCCCEEEEEEECCCCEEECCCCCCCEEECCEEEEECCCEEEEEHHHHHHHHHHHH LYSTLWAEEKFKKGKEVGLLYILLRPPVEFIKKYFLKRGFLSGSEGFILSIVSSYYVFLK HHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YAKLWEQNKSLSGAEDH HHHHHHCCCCCCCCCCC >Mature Secondary Structure AENSIGALVLTYNEEDNIKDCLESIKWVDEIVVVDSYSDDDTIDICKEYTDKVYARKFD CCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHC NFSSQRNFGLGKLKTDWVLVVDADERVTPELKEEIYGALQSGPFLAYQVPRKNYFLGRWI CCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH KYCGWYPDYTLRLFKVSEGDYKFSGKVHEDVRVNGKVGILKNPLVHLTYRDLSSYIKKMD HHCCCCCCCEEEEEEECCCCEEECCCCCCCEEECCEEEEECCCEEEEEHHHHHHHHHHHH LYSTLWAEEKFKKGKEVGLLYILLRPPVEFIKKYFLKRGFLSGSEGFILSIVSSYYVFLK HHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YAKLWEQNKSLSGAEDH HHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824620 [H]