| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932720
Identifier: 220932720
GI number: 220932720
Start: 2012871
End: 2013797
Strand: Reverse
Name: 220932720
Synonym: Hore_18840
Alternate gene names: NA
Gene position: 2013797-2012871 (Counterclockwise)
Preceding gene: 220932721
Following gene: 220932719
Centisome position: 78.11
GC content: 38.94
Gene sequence:
>927_bases ATGAAAATTAGTGGTTTTTCCTTTGTCAGGAATGCAACAAAATTATATTATCCAATTAAAGAGGCTATAATGTCTATTTT ACCGATTTGTGATGAGTTCATCGTGGCTGTCGGTAAAGGTGATTCCGATGATTACACCCGTGATGAGATTGAGAGTATCG GTAGTGATAAGATTAAGATAATCGATACTGTCTGGGATGAAAAAGATTTTGTTAATGGTAGAATCAATGCCATTCAGACT AATATAGCTTTAGAACAGTGTACCGGTGACTGGTGTTTTTATCTCCAGGCTGACGAAGTTGTTCATGAAAAATACCTCCC GGTAATTAAAGACCGGTGTCTGGAGTTGCTTGATGATGAAGAAGTGGAAGGGTTAGTTTTTGATTACCGTCATTTCTGGG GTGATTACGACCACTATCACAACAGTCATGGCTGGTATAAGAGGGAAGTAAGGATTGTCAGGAATAATATTGGCATTAAA TCACATAAGAGTGCTCAGGGTTTCAGGAGAAATGGAGAGAGAATTAAAGCAGCCCACGCCCATGCTGAAATTTTTCATTA TGGCTGGGTTAGACCCCCAAGATATATGCAGATGAAGTCAAAAGCTTTGAATAGTTTACACTGGGGAAAGAAAAAAGCTG AGAAATACTATTCAAAAGCCCCCAGGGAATTTGATTATGGTCCTCTGGACAGGCTTCCAGTATATAAAGGAACCCACCCG GAGGTTATGAAAGACTGGATTGCTAAAATGGACTGGAAAGATAAACTCCAGTATAGTGGGGAACCTAATCCTTATCGGGA AGAACACAAACATGAAAAGTTAAAAAATAGAATACTGACAGCTATTGAACAGAAATTAGAAAGGAAATTTGGTGGCAAGG TTTACCTGAGTAGCCACCGTAATTATGAGCTACTCGGTGATAAATAA
Upstream 100 bases:
>100_bases AATTTCGGGGATGCCGAGTTGAATCGGTTATTCTGGTTTTTATTAGCTCTGAATGTAGTTATTATTAATTATTTTAAGAA TAGCAGGAGGGTTAACTATA
Downstream 100 bases:
>100_bases TTTGTTTATTTAGATGGTCAGGGAGTGGAGGATATGGTAAAAGTATTAATAATTGAACCCAGGAAACAACACCTTGAGGT TTTATATCCCCAGGTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKISGFSFVRNATKLYYPIKEAIMSILPICDEFIVAVGKGDSDDYTRDEIESIGSDKIKIIDTVWDEKDFVNGRINAIQT NIALEQCTGDWCFYLQADEVVHEKYLPVIKDRCLELLDDEEVEGLVFDYRHFWGDYDHYHNSHGWYKREVRIVRNNIGIK SHKSAQGFRRNGERIKAAHAHAEIFHYGWVRPPRYMQMKSKALNSLHWGKKKAEKYYSKAPREFDYGPLDRLPVYKGTHP EVMKDWIAKMDWKDKLQYSGEPNPYREEHKHEKLKNRILTAIEQKLERKFGGKVYLSSHRNYELLGDK
Sequences:
>Translated_308_residues MKISGFSFVRNATKLYYPIKEAIMSILPICDEFIVAVGKGDSDDYTRDEIESIGSDKIKIIDTVWDEKDFVNGRINAIQT NIALEQCTGDWCFYLQADEVVHEKYLPVIKDRCLELLDDEEVEGLVFDYRHFWGDYDHYHNSHGWYKREVRIVRNNIGIK SHKSAQGFRRNGERIKAAHAHAEIFHYGWVRPPRYMQMKSKALNSLHWGKKKAEKYYSKAPREFDYGPLDRLPVYKGTHP EVMKDWIAKMDWKDKLQYSGEPNPYREEHKHEKLKNRILTAIEQKLERKFGGKVYLSSHRNYELLGDK >Mature_308_residues MKISGFSFVRNATKLYYPIKEAIMSILPICDEFIVAVGKGDSDDYTRDEIESIGSDKIKIIDTVWDEKDFVNGRINAIQT NIALEQCTGDWCFYLQADEVVHEKYLPVIKDRCLELLDDEEVEGLVFDYRHFWGDYDHYHNSHGWYKREVRIVRNNIGIK SHKSAQGFRRNGERIKAAHAHAEIFHYGWVRPPRYMQMKSKALNSLHWGKKKAEKYYSKAPREFDYGPLDRLPVYKGTHP EVMKDWIAKMDWKDKLQYSGEPNPYREEHKHEKLKNRILTAIEQKLERKFGGKVYLSSHRNYELLGDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36370; Mature: 36370
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISGFSFVRNATKLYYPIKEAIMSILPICDEFIVAVGKGDSDDYTRDEIESIGSDKIKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCCCEEE IDTVWDEKDFVNGRINAIQTNIALEQCTGDWCFYLQADEVVHEKYLPVIKDRCLELLDDE EEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC EVEGLVFDYRHFWGDYDHYHNSHGWYKREVRIVRNNIGIKSHKSAQGFRRNGERIKAAHA CCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHH HAEIFHYGWVRPPRYMQMKSKALNSLHWGKKKAEKYYSKAPREFDYGPLDRLPVYKGTHP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH EVMKDWIAKMDWKDKLQYSGEPNPYREEHKHEKLKNRILTAIEQKLERKFGGKVYLSSHR HHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC NYELLGDK CEEECCCC >Mature Secondary Structure MKISGFSFVRNATKLYYPIKEAIMSILPICDEFIVAVGKGDSDDYTRDEIESIGSDKIKI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHCCCCCEEE IDTVWDEKDFVNGRINAIQTNIALEQCTGDWCFYLQADEVVHEKYLPVIKDRCLELLDDE EEECCCCCHHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCC EVEGLVFDYRHFWGDYDHYHNSHGWYKREVRIVRNNIGIKSHKSAQGFRRNGERIKAAHA CCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHH HAEIFHYGWVRPPRYMQMKSKALNSLHWGKKKAEKYYSKAPREFDYGPLDRLPVYKGTHP HHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH EVMKDWIAKMDWKDKLQYSGEPNPYREEHKHEKLKNRILTAIEQKLERKFGGKVYLSSHR HHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCC NYELLGDK CEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA