| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932693
Identifier: 220932693
GI number: 220932693
Start: 1980634
End: 1981575
Strand: Reverse
Name: 220932693
Synonym: Hore_18570
Alternate gene names: NA
Gene position: 1981575-1980634 (Counterclockwise)
Preceding gene: 220932694
Following gene: 220932692
Centisome position: 76.86
GC content: 26.54
Gene sequence:
>942_bases ATGCGAGGATTAAAGATAATAACAATTATTTTATTTATTTTAATATTTGCGTATAAAGGGTATCAAATAATAGGAGTAAA TATATACAGGTTAAAGAGTTTTAACCTTGATAAAAGTAACTATATTATATTGAGTGAAAGAAATGGATTATATAGTTGTT TAGAAAAAGGGAAAAATTATGATATTGAAATAAAAGAAAAGTGGGGAGTATATTTTGCTAGAAATATGTTTTTTGTAAAT AAAAATATTATTTGTTTGGTTTTAGGAAAAAAGGTGTATTTTTATAATTATAAAGATAAAATACAAATTAATAAAATAGA AATCACAAGCCGTTCAATTGGAATCAACAAAAACAGTCAGGGTGACTTAATTTTATTTTCAGGAGGGGACTTATATGAAT ACTGCTATCCGGAAGATAAATTGATAAAAATAAAAGATTTAGTTGAAGATCCGTCAGACCATAGTATATATTATCCTTCT TTATACATACACCCTAACAAGATATCATATTATACAGAAAGAAACTCAGTATTTTATTCAGCTTATATTGATTCAGAAAA AAGATTAAGGGGTGTATATGAACTTTCACTCGATGATTTTTCATTAAAGCTAATAGATAAAGGGTTCTGTCCACAGGTAG ATAATAAAAGGAAATGTCTTTATTATATAAACCACCAGCAGGACAGTGTAATAAAACTAAACCTGGCTAATGGTCATAAA AATGTGTTATTCAAATACCCTCATAATATCATCGATATTGTAGTGGTTAATGATAATATGGTATTTTTTGTTCATGCTTC TAGTAGAGAAACCATTAAAGGTGTAAAAATTGATCAAATGAAAGTATATCAACAGGGAAAAATAAAGACAATCTATACCA GGGGATACATATATGGTTCACCTTTTGATGTTATAGAAAAAAAGGAGATTAATAAAGAATGA
Upstream 100 bases:
>100_bases ATCAGACGAATATGATGCATGTTCATTTTAAAATATTTAGTGTAATAACTCCGGGGGTAATATATTTGCCCCCGGGTTTA TAAAAAGGGGATGTGGAGGC
Downstream 100 bases:
>100_bases GGGAGGGTATACAATTGAATGTTACTGCTCTTATAATATCTATAATAGTTGTTTTAATAGCAATTATCTATAATTATTTA TTCTGGTACAATGACTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MRGLKIITIILFILIFAYKGYQIIGVNIYRLKSFNLDKSNYIILSERNGLYSCLEKGKNYDIEIKEKWGVYFARNMFFVN KNIICLVLGKKVYFYNYKDKIQINKIEITSRSIGINKNSQGDLILFSGGDLYEYCYPEDKLIKIKDLVEDPSDHSIYYPS LYIHPNKISYYTERNSVFYSAYIDSEKRLRGVYELSLDDFSLKLIDKGFCPQVDNKRKCLYYINHQQDSVIKLNLANGHK NVLFKYPHNIIDIVVVNDNMVFFVHASSRETIKGVKIDQMKVYQQGKIKTIYTRGYIYGSPFDVIEKKEINKE
Sequences:
>Translated_313_residues MRGLKIITIILFILIFAYKGYQIIGVNIYRLKSFNLDKSNYIILSERNGLYSCLEKGKNYDIEIKEKWGVYFARNMFFVN KNIICLVLGKKVYFYNYKDKIQINKIEITSRSIGINKNSQGDLILFSGGDLYEYCYPEDKLIKIKDLVEDPSDHSIYYPS LYIHPNKISYYTERNSVFYSAYIDSEKRLRGVYELSLDDFSLKLIDKGFCPQVDNKRKCLYYINHQQDSVIKLNLANGHK NVLFKYPHNIIDIVVVNDNMVFFVHASSRETIKGVKIDQMKVYQQGKIKTIYTRGYIYGSPFDVIEKKEINKE >Mature_313_residues MRGLKIITIILFILIFAYKGYQIIGVNIYRLKSFNLDKSNYIILSERNGLYSCLEKGKNYDIEIKEKWGVYFARNMFFVN KNIICLVLGKKVYFYNYKDKIQINKIEITSRSIGINKNSQGDLILFSGGDLYEYCYPEDKLIKIKDLVEDPSDHSIYYPS LYIHPNKISYYTERNSVFYSAYIDSEKRLRGVYELSLDDFSLKLIDKGFCPQVDNKRKCLYYINHQQDSVIKLNLANGHK NVLFKYPHNIIDIVVVNDNMVFFVHASSRETIKGVKIDQMKVYQQGKIKTIYTRGYIYGSPFDVIEKKEINKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36799; Mature: 36799
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLKIITIILFILIFAYKGYQIIGVNIYRLKSFNLDKSNYIILSERNGLYSCLEKGKNY CCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCCC DIEIKEKWGVYFARNMFFVNKNIICLVLGKKVYFYNYKDKIQINKIEITSRSIGINKNSQ EEEEEECCCEEEEEEEEEECCCEEEEEEECEEEEEECCCEEEEEEEEEEEEEECCCCCCC GDLILFSGGDLYEYCYPEDKLIKIKDLVEDPSDHSIYYPSLYIHPNKISYYTERNSVFYS CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCEEECCEEEEECCEEEEEEECCCEEEE AYIDSEKRLRGVYELSLDDFSLKLIDKGFCPQVDNKRKCLYYINHQQDSVIKLNLANGHK EEECCCHHCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC NVLFKYPHNIIDIVVVNDNMVFFVHASSRETIKGVKIDQMKVYQQGKIKTIYTRGYIYGS EEEEECCCCEEEEEEECCCEEEEEECCCCCEECCEEEEEEEEECCCCEEEEEEEEEEECC PFDVIEKKEINKE CHHHHCCCCCCCC >Mature Secondary Structure MRGLKIITIILFILIFAYKGYQIIGVNIYRLKSFNLDKSNYIILSERNGLYSCLEKGKNY CCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCEEEEECCCCHHHHHHCCCCC DIEIKEKWGVYFARNMFFVNKNIICLVLGKKVYFYNYKDKIQINKIEITSRSIGINKNSQ EEEEEECCCEEEEEEEEEECCCEEEEEEECEEEEEECCCEEEEEEEEEEEEEECCCCCCC GDLILFSGGDLYEYCYPEDKLIKIKDLVEDPSDHSIYYPSLYIHPNKISYYTERNSVFYS CCEEEEECCCEEEEECCCCCEEEEEHHHCCCCCCEEECCEEEEECCEEEEEEECCCEEEE AYIDSEKRLRGVYELSLDDFSLKLIDKGFCPQVDNKRKCLYYINHQQDSVIKLNLANGHK EEECCCHHCCEEEEEEECCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCC NVLFKYPHNIIDIVVVNDNMVFFVHASSRETIKGVKIDQMKVYQQGKIKTIYTRGYIYGS EEEEECCCCEEEEEEECCCEEEEEECCCCCEECCEEEEEEEEECCCCEEEEEEEEEEECC PFDVIEKKEINKE CHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA