Click here to switch to the map view.

The map label for this gene is 220932691

Identifier: 220932691

GI number: 220932691

Start: 1979637

End: 1980314

Strand: Reverse

Name: 220932691

Synonym: Hore_18550

Alternate gene names: NA

Gene position: 1980314-1979637 (Counterclockwise)

Preceding gene: 220932692

Following gene: 220932690

Centisome position: 76.81

GC content: 37.91

Gene sequence:

>678_bases
ATGATGCGTGGGGATGATGTAGAACAGGTACAAACCTTTTTAAACCAACAGGGGTATGATGTAACAGTTGATGGTATATT
GGGCCCTGAGACGGCAGGGGCAGTTAGAGACTACCAGGAAGATAAAGGTTTATCTGTAGATGGTGTTGTAGGGCCCAATA
CCCGGGAAGAGATAAAAAAGGATCTGGGGATAGAGGATGTTAGGCATGAAATATATTTTCACGATACAGAGAAAGTTTAC
TGGACAGATAATACCGGAAAAATTATAAAATCATGGCAAGCTAGTGATGATATTATAGGAGGAAAGAATCGAGAAGGGGA
AACAAGAGAATCATTACCTGCGGGAGAATATATTGCAACAGGATATATGACCGGTATTAATTATGGTAGAGCTTACGGTA
CAGGTTATATAGATACAGGAGATTCTCGTGGCAGAGATATTCACGGTGGTGGGTCAAGATTGACTTCAAAAGATGAAGTA
GCTCAAGATTTTGTCAATAAAGTAGGGGCATATGCGCCACGGCAAGAATTACTACCAACATATGGATGTATAAGAATGCA
TAATGAGGATGTGGAAGAATTATGTAACTTGATTAGCGATGAAGGAAACAATATTCCTTTACATGTATCTGAAACAATAG
AGATTAATGATGATAAAATAATTAATTATACTCAATAA

Upstream 100 bases:

>100_bases
TATATTTAACAATAAAAATTATTTATCTATAGTTCAAGAAAATGGTAAATATTATTGATATCAGAATATTAAAAGAAATA
TAATGAAGGAACAACAGCCC

Downstream 100 bases:

>100_bases
AATTTAAATACAAACCTGGTTTAAGGTCAATTTCCTTAGGCCAGGTTTGGGAAAATATAATTAGTAAAGTTTTAATGAGG
GTGATTATGCTATGAAAATT

Product: Peptidoglycan-binding domain 1 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MMRGDDVEQVQTFLNQQGYDVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEIKKDLGIEDVRHEIYFHDTEKVY
WTDNTGKIIKSWQASDDIIGGKNREGETRESLPAGEYIATGYMTGINYGRAYGTGYIDTGDSRGRDIHGGGSRLTSKDEV
AQDFVNKVGAYAPRQELLPTYGCIRMHNEDVEELCNLISDEGNNIPLHVSETIEINDDKIINYTQ

Sequences:

>Translated_225_residues
MMRGDDVEQVQTFLNQQGYDVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEIKKDLGIEDVRHEIYFHDTEKVY
WTDNTGKIIKSWQASDDIIGGKNREGETRESLPAGEYIATGYMTGINYGRAYGTGYIDTGDSRGRDIHGGGSRLTSKDEV
AQDFVNKVGAYAPRQELLPTYGCIRMHNEDVEELCNLISDEGNNIPLHVSETIEINDDKIINYTQ
>Mature_225_residues
MMRGDDVEQVQTFLNQQGYDVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEIKKDLGIEDVRHEIYFHDTEKVY
WTDNTGKIIKSWQASDDIIGGKNREGETRESLPAGEYIATGYMTGINYGRAYGTGYIDTGDSRGRDIHGGGSRLTSKDEV
AQDFVNKVGAYAPRQELLPTYGCIRMHNEDVEELCNLISDEGNNIPLHVSETIEINDDKIINYTQ

Specific function: Unknown

COG id: COG3409

COG function: function code M; Putative peptidoglycan-binding domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25046; Mature: 25046

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGDDVEQVQTFLNQQGYDVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEIKK
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHH
DLGIEDVRHEIYFHDTEKVYWTDNTGKIIKSWQASDDIIGGKNREGETRESLPAGEYIAT
HCCHHHHHHEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHH
GYMTGINYGRAYGTGYIDTGDSRGRDIHGGGSRLTSKDEVAQDFVNKVGAYAPRQELLPT
HHHHCCCCCHHCCCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCC
YGCIRMHNEDVEELCNLISDEGNNIPLHVSETIEINDDKIINYTQ
HHEEEECCCCHHHHHHHHHCCCCCCCEEEECEEEECCCEEEEECC
>Mature Secondary Structure
MMRGDDVEQVQTFLNQQGYDVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEIKK
CCCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCHHHHHH
DLGIEDVRHEIYFHDTEKVYWTDNTGKIIKSWQASDDIIGGKNREGETRESLPAGEYIAT
HCCHHHHHHEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCHHH
GYMTGINYGRAYGTGYIDTGDSRGRDIHGGGSRLTSKDEVAQDFVNKVGAYAPRQELLPT
HHHHCCCCCHHCCCCEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCC
YGCIRMHNEDVEELCNLISDEGNNIPLHVSETIEINDDKIINYTQ
HHEEEECCCCHHHHHHHHHCCCCCCCEEEECEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA