| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932681
Identifier: 220932681
GI number: 220932681
Start: 1970550
End: 1971035
Strand: Reverse
Name: 220932681
Synonym: Hore_18450
Alternate gene names: NA
Gene position: 1971035-1970550 (Counterclockwise)
Preceding gene: 220932682
Following gene: 220932680
Centisome position: 76.45
GC content: 34.98
Gene sequence:
>486_bases ATGCTTTTCTATATTTTCCTGGGGATATTATTAGGCCAGATGATGGGGAGTAAAGGAACTTACAACAGAAGTTCACAGAA CCGAAAAGGTAGTTCAAAAAGGGTTACCAAAACCTTTACCAAAAAATTTATACTCTCCAAAGATTCCCCTGAAGCAATAA CCCCTGATAATATTTCAATAAATGTTAAACCCACCGGACAAAAAGAAGGGGCCCGTGAACCCAATAAATTAATACTATCT ATCCTGTGGGCTCATTTCAAGGCCTATAAAGAAGGTTTATTAAGATATAAAAGGCGTTCTCCATGGGAAATAATAGAGGA TTCAAGACTTGATAAGAGCACAATAAATAACAATCTACATAAAGAATGGGTTAGCTTTTTAAATGAAGTTATTGATAGAG ATCTGGTAAAATGGATCAATAACCCGGATGAAGTTAAAACGAGAACAATGGAAGCAATGAAAAAAATAAACACAAAATCG GCCTGA
Upstream 100 bases:
>100_bases TTCAGTGCCCTGGAAGATAGAAATAACTAGAAGGGGTGTGCTTTTTCACACCCTTTCTATATATTTTTTTAAAATATGAT TAATAAAAGGAGGTTGCATA
Downstream 100 bases:
>100_bases TTAAAAAATTTGACTTTAACTGACTATTTTGTTATACTATAATAGGAGAATTTTTTGCTTTCTATAATTTCTCATTTTGC TTTCTTATAATGCCATATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS A
Sequences:
>Translated_161_residues MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS A >Mature_161_residues MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISINVKPTGQKEGAREPNKLILS ILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLHKEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKS A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18664; Mature: 18664
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISI CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE NVKPTGQKEGAREPNKLILSILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLH EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCHHH KEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKSA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLFYIFLGILLGQMMGSKGTYNRSSQNRKGSSKRVTKTFTKKFILSKDSPEAITPDNISI CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEE NVKPTGQKEGAREPNKLILSILWAHFKAYKEGLLRYKRRSPWEIIEDSRLDKSTINNNLH EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCHHH KEWVSFLNEVIDRDLVKWINNPDEVKTRTMEAMKKINTKSA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA