| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932653
Identifier: 220932653
GI number: 220932653
Start: 1938787
End: 1939923
Strand: Reverse
Name: 220932653
Synonym: Hore_18170
Alternate gene names: NA
Gene position: 1939923-1938787 (Counterclockwise)
Preceding gene: 220932654
Following gene: 220932652
Centisome position: 75.24
GC content: 38.08
Gene sequence:
>1137_bases ATGAGAAGATTAACTGTATTATTTGTAATTATAGTAATGATAACAACAGTCTTTATTACAGGAAATGCTTCACCGGCCTG TACAGAGACAGAACCGGTGGCTACAGTCAGTAATGTAGAGGGCAGGGTTGAGAAACTGGTTAATAACTGGTTTTTAAATA TTTTTCAGATAAAGGCCTGGCATGTTATTAAAAATGGAGATAACCTAAATCAGGGTGATGTTATTAAAACCGGTGAAAAG GCTTCCTGTGAAATTGTTTTCAGGAATAATTCTTTTGTCAAAATAGATGGCGGAAGTGAGGTTGTCATAGGAGAATGCAA TATAGTTGAGACCGGGACAACGACTTCCCTTAAACTTAATAAAGGTAGAATATGGTCCAGGGTTGAAAAAGTATGGAAGG GTATAACTAAATTTAAGGTTATAACCCCTTCAGCAGTGGCCGGGGTTAAAGGAACCCTCTTCTCAGTTTGTGTTGGTGAA GGTGATACCACCATTCTTTCGGTAAGAGAAGGGGCTGTTGAGCTGTCCAGTAGGGAAGGTGATGAACGGGTTCTTGTTAC CACTAATAACATGGCCCGGGCCAGGGCCGGCCTGGTTTTAAAGCCTGTCAAAATAGATGAACAGGAGAAAAGGGCCTGGG AGAGGTCAGATGTTAAGGAATGGATTAAAAGAGTCAACCTCAAAGTGGGTGAAGGTAGTAAGGCAGATGATGGCACAAGT CATGTCCCTGAAGAACCTGCCGCTAATAACGGGAAACCCGATGACATGGACCTACCTCCCGATAAAGATAAAGATGATGA GATAGATGATTACTCTGATAAAGAAGACAAGGATGATAACACGAATAATATAGATGATGATAACTATAGTAAGGATAAAG ATGAAATCATTAAAGACAAAGATAAAAAAGAAGATGATCAGGACCAGGATAAAGATGCAGATGTAAAAGAAAAACCCACA GATATAGAAAACGAAGATAAAGATAAAGATGAAAAAAAAGAAGATAAAGATAATGGTGAAGAAAATGAAGACAGAAATGA AAAAGATTCAGATGAGGAAGTTAATAGTTCCAGTAAAGATAAGAATACAAATAAATCAAATCCAGGAGTTCTGGCAAAAA CCTCAAAGAAAAAATGA
Upstream 100 bases:
>100_bases CGGACAGGTTAAAAAATATGGACTGGCAACGAGATGAATATAAAGATAGTAATATAGGGTCAGCTGAAAGGGTTTACCGC CTGATGAGGAGGGAACAGGT
Downstream 100 bases:
>100_bases GTAGAGTTTTAGATTTAAATGTTATTGAAAGGGGCTTTTTGATGAGTGAGATTAGTTACCGTTCTATTCCCCTTTTTTCA GGGCTTAACGATGAACAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MRRLTVLFVIIVMITTVFITGNASPACTETEPVATVSNVEGRVEKLVNNWFLNIFQIKAWHVIKNGDNLNQGDVIKTGEK ASCEIVFRNNSFVKIDGGSEVVIGECNIVETGTTTSLKLNKGRIWSRVEKVWKGITKFKVITPSAVAGVKGTLFSVCVGE GDTTILSVREGAVELSSREGDERVLVTTNNMARARAGLVLKPVKIDEQEKRAWERSDVKEWIKRVNLKVGEGSKADDGTS HVPEEPAANNGKPDDMDLPPDKDKDDEIDDYSDKEDKDDNTNNIDDDNYSKDKDEIIKDKDKKEDDQDQDKDADVKEKPT DIENEDKDKDEKKEDKDNGEENEDRNEKDSDEEVNSSSKDKNTNKSNPGVLAKTSKKK
Sequences:
>Translated_378_residues MRRLTVLFVIIVMITTVFITGNASPACTETEPVATVSNVEGRVEKLVNNWFLNIFQIKAWHVIKNGDNLNQGDVIKTGEK ASCEIVFRNNSFVKIDGGSEVVIGECNIVETGTTTSLKLNKGRIWSRVEKVWKGITKFKVITPSAVAGVKGTLFSVCVGE GDTTILSVREGAVELSSREGDERVLVTTNNMARARAGLVLKPVKIDEQEKRAWERSDVKEWIKRVNLKVGEGSKADDGTS HVPEEPAANNGKPDDMDLPPDKDKDDEIDDYSDKEDKDDNTNNIDDDNYSKDKDEIIKDKDKKEDDQDQDKDADVKEKPT DIENEDKDKDEKKEDKDNGEENEDRNEKDSDEEVNSSSKDKNTNKSNPGVLAKTSKKK >Mature_378_residues MRRLTVLFVIIVMITTVFITGNASPACTETEPVATVSNVEGRVEKLVNNWFLNIFQIKAWHVIKNGDNLNQGDVIKTGEK ASCEIVFRNNSFVKIDGGSEVVIGECNIVETGTTTSLKLNKGRIWSRVEKVWKGITKFKVITPSAVAGVKGTLFSVCVGE GDTTILSVREGAVELSSREGDERVLVTTNNMARARAGLVLKPVKIDEQEKRAWERSDVKEWIKRVNLKVGEGSKADDGTS HVPEEPAANNGKPDDMDLPPDKDKDDEIDDYSDKEDKDDNTNNIDDDNYSKDKDEIIKDKDKKEDDQDQDKDADVKEKPT DIENEDKDKDEKKEDKDNGEENEDRNEKDSDEEVNSSSKDKNTNKSNPGVLAKTSKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42181; Mature: 42181
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLTVLFVIIVMITTVFITGNASPACTETEPVATVSNVEGRVEKLVNNWFLNIFQIKAW CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEE HVIKNGDNLNQGDVIKTGEKASCEIVFRNNSFVKIDGGSEVVIGECNIVETGTTTSLKLN EEEECCCCCCCCCEEECCCCCEEEEEEECCCEEEECCCCEEEEEECEEEECCCCEEEEEC KGRIWSRVEKVWKGITKFKVITPSAVAGVKGTLFSVCVGEGDTTILSVREGAVELSSREG CCHHHHHHHHHHHCHHHEEEECCHHHHCCCCCEEEEEECCCCEEEEEECCCCEEECCCCC DERVLVTTNNMARARAGLVLKPVKIDEQEKRAWERSDVKEWIKRVNLKVGEGSKADDGTS CCEEEEEECCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC HVPEEPAANNGKPDDMDLPPDKDKDDEIDDYSDKEDKDDNTNNIDDDNYSKDKDEIIKDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC DKKEDDQDQDKDADVKEKPTDIENEDKDKDEKKEDKDNGEENEDRNEKDSDEEVNSSSKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC KNTNKSNPGVLAKTSKKK CCCCCCCCCEEECCCCCC >Mature Secondary Structure MRRLTVLFVIIVMITTVFITGNASPACTETEPVATVSNVEGRVEKLVNNWFLNIFQIKAW CCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEE HVIKNGDNLNQGDVIKTGEKASCEIVFRNNSFVKIDGGSEVVIGECNIVETGTTTSLKLN EEEECCCCCCCCCEEECCCCCEEEEEEECCCEEEECCCCEEEEEECEEEECCCCEEEEEC KGRIWSRVEKVWKGITKFKVITPSAVAGVKGTLFSVCVGEGDTTILSVREGAVELSSREG CCHHHHHHHHHHHCHHHEEEECCHHHHCCCCCEEEEEECCCCEEEEEECCCCEEECCCCC DERVLVTTNNMARARAGLVLKPVKIDEQEKRAWERSDVKEWIKRVNLKVGEGSKADDGTS CCEEEEEECCHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCC HVPEEPAANNGKPDDMDLPPDKDKDDEIDDYSDKEDKDDNTNNIDDDNYSKDKDEIIKDK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC DKKEDDQDQDKDADVKEKPTDIENEDKDKDEKKEDKDNGEENEDRNEKDSDEEVNSSSKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC KNTNKSNPGVLAKTSKKK CCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA