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The map label for this gene is sufB [C]

Identifier: 220932646

GI number: 220932646

Start: 1932525

End: 1933475

Strand: Reverse

Name: sufB [C]

Synonym: Hore_18100

Alternate gene names: 220932646

Gene position: 1933475-1932525 (Counterclockwise)

Preceding gene: 220932647

Following gene: 220932645

Centisome position: 74.99

GC content: 42.48

Gene sequence:

>951_bases
TTGAAGCTTAGTTTTGATGAAGAATTTAAAATGCTGGTAGATGCCTTTGAGAAAAGTGGTGGTGATGGTTCTGTCTTCAG
TGAAGAAGACGGGGGCTTTCTTTTGATAAATGCCAACCGGGTGGTTGGTGTTAATGAAGTTGAGGGTTTAAAAATAGATA
CTGAACCACAGGATGATGGGGTCAAGGTCAGGATTGAGATTGCCGATGGAGCCCGGTTTAAAAAACCGATGCATATGTGT
TTCGGGGTAACCCATAAAGAGGGGCTACAGTATATTCAGGCTGAGTATGTGGTCGGGGAGGATGCCGAGGTTCACCTGTT
AGCCCACTGCAGTTTTCCCAAAGCTAAAAAAGTTATTCATAAAATGGATGCTGATATCCATCTGAAAAAAAACGCAATTC
TAACCTATGAAGAGGTTCATTATCATGGGCAGGAAGCCGGAGTGGAGGTTATCCCTAAAACCAGGGCCAAACTTGATGAA
GGAGCCTATTTTTTCAGTGAGTTTAAGCTGGTCAAGGGACGGGTTGGTAAACTTGATGTGGATATTGAAGTTGACCAGGC
TAAAAAATCTGCCAGTAAATTAATAAGTAAGGTTTATGGTAAGGAAACCGATAGCATCAAAATAAAAGAAAGGTTAAATT
TGAATGAAGAAGGAAGTAAGGGTCTGGCCAAGACCAGGGTTTTTGCAGCTGACCAGACCGTCAGTGAGGTCATTGGTGAA
GCTTATGGTAATGCTCCCAATGTTAAAGGCCATATTGATTGTGTGGAAGCGGTTAAGGGGGAGGCAGAGGTAAGTGCTAT
TCCCATTATAAAAGTCAATAATGATCTGGCTGAGCTATCCCATGAAGCCAGTATCGGTAGAATAAACCAGAAACAGCTGG
AAACATTGATTGCCAGAGGTTTGAGTGAGGATGAAGCCACAGATTTAATTGTCAATGGTATGCTCAGGTAG

Upstream 100 bases:

>100_bases
AATGGGGTGGCCTATCGCGAAGGTGCTCCCGGAGATATTCAGGAATTTTACGAAGATAAATGTGATAGCTGTGCTTTTGT
GGATGAAGGGGGTGAGATTA

Downstream 100 bases:

>100_bases
TTTTTTAGTGTCGGCAAGTTCCGGGCCTTTTCCTGGTTCTCTGGTGAATAATCTATTTATTTTGCCAGGAGTAACAGGAG
CCGGCCCGGGTTTTCCTTTT

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKLSFDEEFKMLVDAFEKSGGDGSVFSEEDGGFLLINANRVVGVNEVEGLKIDTEPQDDGVKVRIEIADGARFKKPMHMC
FGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIHKMDADIHLKKNAILTYEEVHYHGQEAGVEVIPKTRAKLDE
GAYFFSEFKLVKGRVGKLDVDIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIGE
AYGNAPNVKGHIDCVEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARGLSEDEATDLIVNGMLR

Sequences:

>Translated_316_residues
MKLSFDEEFKMLVDAFEKSGGDGSVFSEEDGGFLLINANRVVGVNEVEGLKIDTEPQDDGVKVRIEIADGARFKKPMHMC
FGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIHKMDADIHLKKNAILTYEEVHYHGQEAGVEVIPKTRAKLDE
GAYFFSEFKLVKGRVGKLDVDIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIGE
AYGNAPNVKGHIDCVEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARGLSEDEATDLIVNGMLR
>Mature_316_residues
MKLSFDEEFKMLVDAFEKSGGDGSVFSEEDGGFLLINANRVVGVNEVEGLKIDTEPQDDGVKVRIEIADGARFKKPMHMC
FGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIHKMDADIHLKKNAILTYEEVHYHGQEAGVEVIPKTRAKLDE
GAYFFSEFKLVKGRVGKLDVDIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIGE
AYGNAPNVKGHIDCVEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARGLSEDEATDLIVNGMLR

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 34784; Mature: 34784

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSFDEEFKMLVDAFEKSGGDGSVFSEEDGGFLLINANRVVGVNEVEGLKIDTEPQDDG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCEEEECCCCCCEEECCCCCCCC
VKVRIEIADGARFKKPMHMCFGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIH
EEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHH
KMDADIHLKKNAILTYEEVHYHGQEAGVEVIPKTRAKLDEGAYFFSEFKLVKGRVGKLDV
HCCCCEEEECCEEEEEHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHHHHCCCCCEEEE
DIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIGE
EEEHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCHHHHEEEECHHHHHHHHHH
AYGNAPNVKGHIDCVEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARG
HHCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCC
LSEDEATDLIVNGMLR
CCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKLSFDEEFKMLVDAFEKSGGDGSVFSEEDGGFLLINANRVVGVNEVEGLKIDTEPQDDG
CCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCEEEECCCCCCEEECCCCCCCC
VKVRIEIADGARFKKPMHMCFGVTHKEGLQYIQAEYVVGEDAEVHLLAHCSFPKAKKVIH
EEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHEEEECCCCCEEEEEECCCHHHHHHHH
KMDADIHLKKNAILTYEEVHYHGQEAGVEVIPKTRAKLDEGAYFFSEFKLVKGRVGKLDV
HCCCCEEEECCEEEEEHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHHHHCCCCCEEEE
DIEVDQAKKSASKLISKVYGKETDSIKIKERLNLNEEGSKGLAKTRVFAADQTVSEVIGE
EEEHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCHHHHEEEECHHHHHHHHHH
AYGNAPNVKGHIDCVEAVKGEAEVSAIPIIKVNNDLAELSHEASIGRINQKQLETLIARG
HHCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHCC
LSEDEATDLIVNGMLR
CCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]