| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932601
Identifier: 220932601
GI number: 220932601
Start: 1889902
End: 1890357
Strand: Reverse
Name: 220932601
Synonym: Hore_17650
Alternate gene names: NA
Gene position: 1890357-1889902 (Counterclockwise)
Preceding gene: 220932602
Following gene: 220932600
Centisome position: 73.32
GC content: 36.4
Gene sequence:
>456_bases ATGAAAAAATTATTAGTAGGTTTTATAATGGTAATTATGTTAATTACCCTTACTTCCTGTGGAAACAATACCCCCAGGAT TGCTGTGCTGGATGTTGATCTCCTGTTACAGAAAAGCCATCTGGCCCAGGAACTTCATAATGATCTGGTTGAATTAGGGA CTAATTTACAGCAGGAATACCTCGAAAAAGAAGAATCTTTAACTGATAAAGAAAAGCAAAATGAACTGGAAAAAATGGAC CAGGAGTTTATGAGGAATAAAAAGCAGATGGAACAGGTTTTAAATGGCCGGATAAATACTATAATTAGTCAGCTGGCCAG AGAGAAAAACCTGGATGTAGTTGTAGATAAAAATAGTACCTATTATGGTGGAATTGACATTACAGGAGAAGTTATAGAAC GTCTAGATGAAATAGCTGGAGAGGATGATGGTGGTAATGGACAGGGAGAAAAATAG
Upstream 100 bases:
>100_bases TTTCCTCTATAAAAAAGGTTTTAGAAAAAATTAATCAACAATATTCCAATCTTAAAAGGGAACTAGCCGATCTGGAAAAG AAGGGGAGTGAAGGTGGTAA
Downstream 100 bases:
>100_bases TTATACGGCCCGGGAACTGGCCCACCTGGTGGGTGGAGAACTGGTTGGAGACCCCGACCTGGTTATCAAGGGGGTCAGCG GTGTTGGAGAAAGCAGGCCA
Product: outer membrane chaperone Skp
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKKLLVGFIMVIMLITLTSCGNNTPRIAVLDVDLLLQKSHLAQELHNDLVELGTNLQQEYLEKEESLTDKEKQNELEKMD QEFMRNKKQMEQVLNGRINTIISQLAREKNLDVVVDKNSTYYGGIDITGEVIERLDEIAGEDDGGNGQGEK
Sequences:
>Translated_151_residues MKKLLVGFIMVIMLITLTSCGNNTPRIAVLDVDLLLQKSHLAQELHNDLVELGTNLQQEYLEKEESLTDKEKQNELEKMD QEFMRNKKQMEQVLNGRINTIISQLAREKNLDVVVDKNSTYYGGIDITGEVIERLDEIAGEDDGGNGQGEK >Mature_151_residues MKKLLVGFIMVIMLITLTSCGNNTPRIAVLDVDLLLQKSHLAQELHNDLVELGTNLQQEYLEKEESLTDKEKQNELEKMD QEFMRNKKQMEQVLNGRINTIISQLAREKNLDVVVDKNSTYYGGIDITGEVIERLDEIAGEDDGGNGQGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17093; Mature: 17093
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLVGFIMVIMLITLTSCGNNTPRIAVLDVDLLLQKSHLAQELHNDLVELGTNLQQEY CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LEKEESLTDKEKQNELEKMDQEFMRNKKQMEQVLNGRINTIISQLAREKNLDVVVDKNST HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCE YYGGIDITGEVIERLDEIAGEDDGGNGQGEK EECCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKKLLVGFIMVIMLITLTSCGNNTPRIAVLDVDLLLQKSHLAQELHNDLVELGTNLQQEY CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LEKEESLTDKEKQNELEKMDQEFMRNKKQMEQVLNGRINTIISQLAREKNLDVVVDKNST HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCE YYGGIDITGEVIERLDEIAGEDDGGNGQGEK EECCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA