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The map label for this gene is slpA [H]

Identifier: 220932582

GI number: 220932582

Start: 1866292

End: 1868646

Strand: Reverse

Name: slpA [H]

Synonym: Hore_17460

Alternate gene names: 220932582

Gene position: 1868646-1866292 (Counterclockwise)

Preceding gene: 220932583

Following gene: 220932581

Centisome position: 72.48

GC content: 37.75

Gene sequence:

>2355_bases
ATGAAGAAGTTTGGAATTGTTTTTCTTGCAATGCTTTTAGTTGTTGCTTTTGCAATGCCCACATTTGCTAATCCTTTTAG
CGATGTACCTGAAAATCACTGGGCATATGAAGCTATTCAGAAGGTAGTTTCTGCCGGTATTTTAAGTGGTTACCCTGATG
GAACCTACCAGGGTAAAAGAACTATAAACCGTTTCCAGATGGCTGTTATCATATCCCGTATCCTGGAAAACGTTGAAAAA
GAACAGGCTGCTTTAGCTGATGAAGTAGAAGACTTAGGAAAAGGTTTAACTCCTGAACAGGCTCAGGATGTTACCGCTAT
CGTTAAAGCTATCATCGCTAAAAACAATCCTGAACAGCCTGAAAGCTTAACTGAACAGCAGGCTGAAGAAGTTGCTAACT
TAATTGAAGCTTTAACCTTTGAGTTCAAAGCTGAACTTAAGGTTATCGGTGCTGACATCGACGCTCTCAAAACCGATGTA
GCCGACCTCGATAGCAGAGTTAGCGACCTTGAAGAAGGTGGCGCTGTAACCTTCAGCGGAAGCTATGGTGTTGATTTTGA
CCACAATGATTGGGAAGGTAATGCCAATTACAACTACTATGTAGATTCTGATCAAGATGGACAATATGAGGGTAAAGAAC
CATATGTATATACTGATCCATGGGATACTGATTCTGACAAAATTGAAATAAATAAAGACAAAGGCTTCAGTCAAAGCTTA
GATTTAGCAGCAAATATTTCTAAAGAAGGTTTTGATGCAGCTGTTAAATTTGATATTGCATCTGGTGACGATGAGGTATC
ATTAGATAGTGCTAGTTTAGCTCTTGAAAATGATACTCTTGCCCTTACCTATAACGAAGGTAATACCTATTCATTTGTAG
ATTACTTCTATAACAATGAAGAATTCAATGGTGTAACTCTTAACTTTAAGAAGGTAGCTACAAATACATTCTTTGGTCAG
GAAGATGTAAAAGTTGGAGAAGTAGATGCTACTGATGATGACGACAATGTAAAATATGATGATGAAAATGGTAGTGAAGC
TCAAACAGAGGATGTAACAGTTCCATTCTATGTATATGGTGCTGAAAAAGACTTTGGCTTTGGTGGATTAGATGTAACAG
TAGGTTATGCTGGTCAGCGTGCCCAGGATAAAGATGAATATGAAGATAATATGCAAGTTGGCTATGAAAACCTCGAAGCT
GATGTAGTTGGACTTGAAGCTGCTACTGACTTGGCCGGAGCTGAAGTTGGCTTTGACTTTGCTTACAGTATGCCTGTAGA
TGAAAATTATGATGCTGATTCTTTAATGAGGTTAGATGCCAGCAAGAGCTTAGGCTTTGCTGATGTTAAATTTGGTTACA
GAAATGTCGGTGAAAACTTTATAATGTTTGGTGAAGATGCTGTACTGACTGATTCTGGTGAAGATGATTATGATGTTTAT
AGAACAGCATTGAACCCAGGTTTAAGTGGTTATAATTTAAGCGTCAAGCCAGCATTATTTGATAAATTAGATGCTGAGTT
CTTCTATGCTAATGCTAAGTATGAAGAAAAAATTGATGTAATGGGTTCAGAAATTGGTGCAGAAGCAAATGGTAAGCTGA
TGGAACTTACTGCTGAAATGCCACTTCTTATTGATGGTCTAACTGTTAATGGTAAGTATTCAACTGAAGATGTAGTAGTT
AAATATGAGTTTGCTGGTTTAACAGGTGAAGAAGAAGATAAAGAAAATACCATGGGCTTTGGTGCTGAATACAATTTCTT
AGCTGACAAAGCTACTGCTACCTTTGACTATACTAGTGTAGATCCTGTTGAAGATGAAGGTCTGGCTACTGAACTAGAAA
CAACTACAAGTTTCGGAATTGAATACGCCATGAATAATTATCTGAATGCTAACTTTGATTATGAATCTGTTGCAAACTTA
GGACATGTTAAAGAATATAATGGGGAAGACATGACTAAGACAGTGACTGGTTATGGTATAAGCTTGACTGATTATCCTGT
AATTGGAGCTTTAACTGTAAGTGCCGGTTACAATGCTGAAAATACCAAAGGTTTCGAATACAACGCAGATGAAAGTAAAG
CTAATGATCTGGAAGCTAAGACTACCGAATATAACTTAGGTCTTGGTTATACTGTTGGTGCTGCTGAATTAACCTATGAC
TATACTAACACTACTAAAGAAGGTGCTGCAGTAGCTAACGGTACCTATACTACCAATAAAGCCGGTTTAACTTATACCAT
CGTTGAAGGTACTGACCTTGTTGCTAATTATGAAGTATTAGACTTTGATGCAGAAGCAGATACAGATGACTACACTGTTA
GCACTGCTAGCGCTGGTGTAAGTGTAGACTTCTAA

Upstream 100 bases:

>100_bases
AATGAGGAAACCTGGACACTCATTGTTGGAATTCTCCAGGGTTGTTTAGTGAACATAGAACTATAAAAATATAAAAAACA
ACCAAGGGGGAATTTGAGTA

Downstream 100 bases:

>100_bases
GACCTATTATAACTGAAACACTTAATCCCCGGGGTTTTTCCCGGGGATTTTTTATTTCAGGTGAATTTTTTCTTTTAGGC
CAAAAGAATGATTATAAACA

Product: S-layer domain-containing protein

Products: NA

Alternate protein names: P100 protein; Surface layer protein [H]

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MKKFGIVFLAMLLVVAFAMPTFANPFSDVPENHWAYEAIQKVVSAGILSGYPDGTYQGKRTINRFQMAVIISRILENVEK
EQAALADEVEDLGKGLTPEQAQDVTAIVKAIIAKNNPEQPESLTEQQAEEVANLIEALTFEFKAELKVIGADIDALKTDV
ADLDSRVSDLEEGGAVTFSGSYGVDFDHNDWEGNANYNYYVDSDQDGQYEGKEPYVYTDPWDTDSDKIEINKDKGFSQSL
DLAANISKEGFDAAVKFDIASGDDEVSLDSASLALENDTLALTYNEGNTYSFVDYFYNNEEFNGVTLNFKKVATNTFFGQ
EDVKVGEVDATDDDDNVKYDDENGSEAQTEDVTVPFYVYGAEKDFGFGGLDVTVGYAGQRAQDKDEYEDNMQVGYENLEA
DVVGLEAATDLAGAEVGFDFAYSMPVDENYDADSLMRLDASKSLGFADVKFGYRNVGENFIMFGEDAVLTDSGEDDYDVY
RTALNPGLSGYNLSVKPALFDKLDAEFFYANAKYEEKIDVMGSEIGAEANGKLMELTAEMPLLIDGLTVNGKYSTEDVVV
KYEFAGLTGEEEDKENTMGFGAEYNFLADKATATFDYTSVDPVEDEGLATELETTTSFGIEYAMNNYLNANFDYESVANL
GHVKEYNGEDMTKTVTGYGISLTDYPVIGALTVSAGYNAENTKGFEYNADESKANDLEAKTTEYNLGLGYTVGAAELTYD
YTNTTKEGAAVANGTYTTNKAGLTYTIVEGTDLVANYEVLDFDAEADTDDYTVSTASAGVSVDF

Sequences:

>Translated_784_residues
MKKFGIVFLAMLLVVAFAMPTFANPFSDVPENHWAYEAIQKVVSAGILSGYPDGTYQGKRTINRFQMAVIISRILENVEK
EQAALADEVEDLGKGLTPEQAQDVTAIVKAIIAKNNPEQPESLTEQQAEEVANLIEALTFEFKAELKVIGADIDALKTDV
ADLDSRVSDLEEGGAVTFSGSYGVDFDHNDWEGNANYNYYVDSDQDGQYEGKEPYVYTDPWDTDSDKIEINKDKGFSQSL
DLAANISKEGFDAAVKFDIASGDDEVSLDSASLALENDTLALTYNEGNTYSFVDYFYNNEEFNGVTLNFKKVATNTFFGQ
EDVKVGEVDATDDDDNVKYDDENGSEAQTEDVTVPFYVYGAEKDFGFGGLDVTVGYAGQRAQDKDEYEDNMQVGYENLEA
DVVGLEAATDLAGAEVGFDFAYSMPVDENYDADSLMRLDASKSLGFADVKFGYRNVGENFIMFGEDAVLTDSGEDDYDVY
RTALNPGLSGYNLSVKPALFDKLDAEFFYANAKYEEKIDVMGSEIGAEANGKLMELTAEMPLLIDGLTVNGKYSTEDVVV
KYEFAGLTGEEEDKENTMGFGAEYNFLADKATATFDYTSVDPVEDEGLATELETTTSFGIEYAMNNYLNANFDYESVANL
GHVKEYNGEDMTKTVTGYGISLTDYPVIGALTVSAGYNAENTKGFEYNADESKANDLEAKTTEYNLGLGYTVGAAELTYD
YTNTTKEGAAVANGTYTTNKAGLTYTIVEGTDLVANYEVLDFDAEADTDDYTVSTASAGVSVDF
>Mature_784_residues
MKKFGIVFLAMLLVVAFAMPTFANPFSDVPENHWAYEAIQKVVSAGILSGYPDGTYQGKRTINRFQMAVIISRILENVEK
EQAALADEVEDLGKGLTPEQAQDVTAIVKAIIAKNNPEQPESLTEQQAEEVANLIEALTFEFKAELKVIGADIDALKTDV
ADLDSRVSDLEEGGAVTFSGSYGVDFDHNDWEGNANYNYYVDSDQDGQYEGKEPYVYTDPWDTDSDKIEINKDKGFSQSL
DLAANISKEGFDAAVKFDIASGDDEVSLDSASLALENDTLALTYNEGNTYSFVDYFYNNEEFNGVTLNFKKVATNTFFGQ
EDVKVGEVDATDDDDNVKYDDENGSEAQTEDVTVPFYVYGAEKDFGFGGLDVTVGYAGQRAQDKDEYEDNMQVGYENLEA
DVVGLEAATDLAGAEVGFDFAYSMPVDENYDADSLMRLDASKSLGFADVKFGYRNVGENFIMFGEDAVLTDSGEDDYDVY
RTALNPGLSGYNLSVKPALFDKLDAEFFYANAKYEEKIDVMGSEIGAEANGKLMELTAEMPLLIDGLTVNGKYSTEDVVV
KYEFAGLTGEEEDKENTMGFGAEYNFLADKATATFDYTSVDPVEDEGLATELETTTSFGIEYAMNNYLNANFDYESVANL
GHVKEYNGEDMTKTVTGYGISLTDYPVIGALTVSAGYNAENTKGFEYNADESKANDLEAKTTEYNLGLGYTVGAAELTYD
YTNTTKEGAAVANGTYTTNKAGLTYTIVEGTDLVANYEVLDFDAEADTDDYTVSTASAGVSVDF

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 85685; Mature: 85685

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFGIVFLAMLLVVAFAMPTFANPFSDVPENHWAYEAIQKVVSAGILSGYPDGTYQGKR
CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
TINRFQMAVIISRILENVEKEQAALADEVEDLGKGLTPEQAQDVTAIVKAIIAKNNPEQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
ESLTEQQAEEVANLIEALTFEFKAELKVIGADIDALKTDVADLDSRVSDLEEGGAVTFSG
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECC
SYGVDFDHNDWEGNANYNYYVDSDQDGQYEGKEPYVYTDPWDTDSDKIEINKDKGFSQSL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCC
DLAANISKEGFDAAVKFDIASGDDEVSLDSASLALENDTLALTYNEGNTYSFVDYFYNNE
CHHCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEECCEEEEEECCCCEEEEEEEEECCC
EFNGVTLNFKKVATNTFFGQEDVKVGEVDATDDDDNVKYDDENGSEAQTEDVTVPFYVYG
CCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEEEE
AEKDFGFGGLDVTVGYAGQRAQDKDEYEDNMQVGYENLEADVVGLEAATDLAGAEVGFDF
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCE
AYSMPVDENYDADSLMRLDASKSLGFADVKFGYRNVGENFIMFGEDAVLTDSGEDDYDVY
EEECCCCCCCCHHHHEEECCCCCCCCEEEECCHHHCCCCEEEECCCEEEECCCCCHHHHH
RTALNPGLSGYNLSVKPALFDKLDAEFFYANAKYEEKIDVMGSEIGAEANGKLMELTAEM
HHHHCCCCCCCCEEECHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCC
PLLIDGLTVNGKYSTEDVVVKYEFAGLTGEEEDKENTMGFGAEYNFLADKATATFDYTSV
CEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCC
DPVEDEGLATELETTTSFGIEYAMNNYLNANFDYESVANLGHVKEYNGEDMTKTVTGYGI
CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCE
SLTDYPVIGALTVSAGYNAENTKGFEYNADESKANDLEAKTTEYNLGLGYTVGAAELTYD
EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEEEE
YTNTTKEGAAVANGTYTTNKAGLTYTIVEGTDLVANYEVLDFDAEADTDDYTVSTASAGV
CCCCCCCCCEEECCCEEECCCCEEEEEEECCEEEEEEEEEEECCCCCCCCEEEEECCCCC
SVDF
EECC
>Mature Secondary Structure
MKKFGIVFLAMLLVVAFAMPTFANPFSDVPENHWAYEAIQKVVSAGILSGYPDGTYQGKR
CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
TINRFQMAVIISRILENVEKEQAALADEVEDLGKGLTPEQAQDVTAIVKAIIAKNNPEQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
ESLTEQQAEEVANLIEALTFEFKAELKVIGADIDALKTDVADLDSRVSDLEEGGAVTFSG
HHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECC
SYGVDFDHNDWEGNANYNYYVDSDQDGQYEGKEPYVYTDPWDTDSDKIEINKDKGFSQSL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCC
DLAANISKEGFDAAVKFDIASGDDEVSLDSASLALENDTLALTYNEGNTYSFVDYFYNNE
CHHCCCCCCCCCEEEEEEECCCCCCEEECCCEEEEECCEEEEEECCCCEEEEEEEEECCC
EFNGVTLNFKKVATNTFFGQEDVKVGEVDATDDDDNVKYDDENGSEAQTEDVTVPFYVYG
CCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCEEEEEEEEE
AEKDFGFGGLDVTVGYAGQRAQDKDEYEDNMQVGYENLEADVVGLEAATDLAGAEVGFDF
CCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCE
AYSMPVDENYDADSLMRLDASKSLGFADVKFGYRNVGENFIMFGEDAVLTDSGEDDYDVY
EEECCCCCCCCHHHHEEECCCCCCCCEEEECCHHHCCCCEEEECCCEEEECCCCCHHHHH
RTALNPGLSGYNLSVKPALFDKLDAEFFYANAKYEEKIDVMGSEIGAEANGKLMELTAEM
HHHHCCCCCCCCEEECHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCC
PLLIDGLTVNGKYSTEDVVVKYEFAGLTGEEEDKENTMGFGAEYNFLADKATATFDYTSV
CEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEECCCC
DPVEDEGLATELETTTSFGIEYAMNNYLNANFDYESVANLGHVKEYNGEDMTKTVTGYGI
CCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEECCCE
SLTDYPVIGALTVSAGYNAENTKGFEYNADESKANDLEAKTTEYNLGLGYTVGAAELTYD
EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCEEEEEE
YTNTTKEGAAVANGTYTTNKAGLTYTIVEGTDLVANYEVLDFDAEADTDDYTVSTASAGV
CCCCCCCCCEEECCCEEECCCCEEEEEEECCEEEEEEEEEEECCCCCCCCEEEEECCCCC
SVDF
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1429468; 7476196 [H]