Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932580

Identifier: 220932580

GI number: 220932580

Start: 1863904

End: 1864827

Strand: Reverse

Name: 220932580

Synonym: Hore_17440

Alternate gene names: NA

Gene position: 1864827-1863904 (Counterclockwise)

Preceding gene: 220932581

Following gene: 220932579

Centisome position: 72.33

GC content: 39.72

Gene sequence:

>924_bases
TTGGAAGTATTTAAAAGATATATAACTGTATTTATTATAGCTATTCTTGTTCTCAGCGGGGTATCTTATCCGGTTGGGTC
TGAAGTAATCCCCATAAAACAGCTTAAAGAAGCAGAGATTATAATTCTGGGGGAACCCGATAATGGTCCTGTTTTTGACA
GGGTAAATAGGCTTGAAAGATTATTATATGGTAAAGAACTTGAAGGTTCTCTGGTTGACAGGGTAAACAGGCTGGTTAGC
TTTGTCTTACCTTCAAGCGGTAAGCCGTCTATGGTACTGCTTTTAAATGCCCTGGAGTGGACAATCACCAATAATATTTC
TTATGGCCCGGTAAAAGAAAGGCTGGAATCGATTGAGAAGTTGACTTTTGGCCAGATAAAAACAGGATCAATTGTTGAAA
GGTTGAGTGGTTTAGTTAATTTAAGCCTGCCTGATGGTAAAATTCCCACCAGGATTGTTACTATTCCGGCAGGAACTAAA
ATCAGGATTAAGCTTTTAAATAAAATAAGCTCCCGTGAATCCCAGATTGGGGAAATAATTAAATTTAAAGTTGTGCAAAA
TGTCAAGGTAAATGATATTCTGGTAATTCCATCCGGGATGCCGGGTTCAATGAAGGTGGTCAATGTATCCCGGGCCGGTC
AGCTTGGTAAGGATGGCCATGTTGAGTTAAAGTATTTAAACGTTCTGGCCATTGATGGTAATGAAATACCATTTAAAATT
CCTGAAAAAGTCTTCCGCGACTATCACTCACGGGAACTGGCCATTGCTGCCAGCCTTTTAAGTTATCTTGTGTTTGAGCA
TCCAGCCGGTCTTATAGCCGGTTATTTTGTCCGGGGGCAGGAAGAAGTTATTGATGCCGGGAATGAATTATATGTAGAGA
CTACAGAGGATGTTAAGGTATATGGGTTACAGTTATATCATTAA

Upstream 100 bases:

>100_bases
AGACCAGAGTCATAATGTAGAAGATGAAGATGATATTGAAGAATCAAATATTAAAGCTGAACTGGAAATAAAGTTTTAGG
GAATAAAGGGGGAAACCAGG

Downstream 100 bases:

>100_bases
TACATATATATTTGTCGTTGTGATTACCACCTATCCAGGAATATCTGGATAGGTTTTTGTTTACCATAGATTACTTAAAG
GATTAGCGGGATTAGATGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS
FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK
IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI
PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH

Sequences:

>Translated_307_residues
MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS
FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK
IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI
PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH
>Mature_307_residues
MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS
FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK
IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI
PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34067; Mature: 34067

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLER
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCEEEEECCCCCCHHHHHHHHHH
LLYGKELEGSLVDRVNRLVSFVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEK
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHH
LTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTKIRIKLLNKISSRESQIGEII
HHCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH
KFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI
EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKV
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEE
YGLQLYH
EEEEEEC
>Mature Secondary Structure
MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLER
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCEEEEECCCCCCHHHHHHHHHH
LLYGKELEGSLVDRVNRLVSFVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEK
HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHH
LTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTKIRIKLLNKISSRESQIGEII
HHCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH
KFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI
EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCC
PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKV
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEE
YGLQLYH
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA