| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932580
Identifier: 220932580
GI number: 220932580
Start: 1863904
End: 1864827
Strand: Reverse
Name: 220932580
Synonym: Hore_17440
Alternate gene names: NA
Gene position: 1864827-1863904 (Counterclockwise)
Preceding gene: 220932581
Following gene: 220932579
Centisome position: 72.33
GC content: 39.72
Gene sequence:
>924_bases TTGGAAGTATTTAAAAGATATATAACTGTATTTATTATAGCTATTCTTGTTCTCAGCGGGGTATCTTATCCGGTTGGGTC TGAAGTAATCCCCATAAAACAGCTTAAAGAAGCAGAGATTATAATTCTGGGGGAACCCGATAATGGTCCTGTTTTTGACA GGGTAAATAGGCTTGAAAGATTATTATATGGTAAAGAACTTGAAGGTTCTCTGGTTGACAGGGTAAACAGGCTGGTTAGC TTTGTCTTACCTTCAAGCGGTAAGCCGTCTATGGTACTGCTTTTAAATGCCCTGGAGTGGACAATCACCAATAATATTTC TTATGGCCCGGTAAAAGAAAGGCTGGAATCGATTGAGAAGTTGACTTTTGGCCAGATAAAAACAGGATCAATTGTTGAAA GGTTGAGTGGTTTAGTTAATTTAAGCCTGCCTGATGGTAAAATTCCCACCAGGATTGTTACTATTCCGGCAGGAACTAAA ATCAGGATTAAGCTTTTAAATAAAATAAGCTCCCGTGAATCCCAGATTGGGGAAATAATTAAATTTAAAGTTGTGCAAAA TGTCAAGGTAAATGATATTCTGGTAATTCCATCCGGGATGCCGGGTTCAATGAAGGTGGTCAATGTATCCCGGGCCGGTC AGCTTGGTAAGGATGGCCATGTTGAGTTAAAGTATTTAAACGTTCTGGCCATTGATGGTAATGAAATACCATTTAAAATT CCTGAAAAAGTCTTCCGCGACTATCACTCACGGGAACTGGCCATTGCTGCCAGCCTTTTAAGTTATCTTGTGTTTGAGCA TCCAGCCGGTCTTATAGCCGGTTATTTTGTCCGGGGGCAGGAAGAAGTTATTGATGCCGGGAATGAATTATATGTAGAGA CTACAGAGGATGTTAAGGTATATGGGTTACAGTTATATCATTAA
Upstream 100 bases:
>100_bases AGACCAGAGTCATAATGTAGAAGATGAAGATGATATTGAAGAATCAAATATTAAAGCTGAACTGGAAATAAAGTTTTAGG GAATAAAGGGGGAAACCAGG
Downstream 100 bases:
>100_bases TACATATATATTTGTCGTTGTGATTACCACCTATCCAGGAATATCTGGATAGGTTTTTGTTTACCATAGATTACTTAAAG GATTAGCGGGATTAGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH
Sequences:
>Translated_307_residues MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH >Mature_307_residues MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLERLLYGKELEGSLVDRVNRLVS FVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEKLTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTK IRIKLLNKISSRESQIGEIIKFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKVYGLQLYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34067; Mature: 34067
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLER CHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCEEEEECCCCCCHHHHHHHHHH LLYGKELEGSLVDRVNRLVSFVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEK HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHH LTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTKIRIKLLNKISSRESQIGEII HHCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH KFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCC PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKV HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEE YGLQLYH EEEEEEC >Mature Secondary Structure MEVFKRYITVFIIAILVLSGVSYPVGSEVIPIKQLKEAEIIILGEPDNGPVFDRVNRLER CHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCCCCEEEEECCCCCCHHHHHHHHHH LLYGKELEGSLVDRVNRLVSFVLPSSGKPSMVLLLNALEWTITNNISYGPVKERLESIEK HHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHH LTFGQIKTGSIVERLSGLVNLSLPDGKIPTRIVTIPAGTKIRIKLLNKISSRESQIGEII HHCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHH KFKVVQNVKVNDILVIPSGMPGSMKVVNVSRAGQLGKDGHVELKYLNVLAIDGNEIPFKI EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCC PEKVFRDYHSRELAIAASLLSYLVFEHPAGLIAGYFVRGQEEVIDAGNELYVETTEDVKV HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEE YGLQLYH EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA